Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G013800 Manihot esculenta HOM05D004799 ORTHO05D005500 3.7e-118 428.3 234 100.0
Manes.10G132000 Manihot esculenta HOM05D004799 ORTHO05D005500 5.6e-90 334.7 227 83.7
Duzib248G0546 Durio zibethinus HOM05D004799 ORTHO05D005500 2.7e-76 289.3 225 74.7
Cpa.g.sc2.26 Carica papaya HOM05D004799 ORTHO05D005500 4.3e-74 282.0 226 72.6
Duzib132G0636 Durio zibethinus HOM05D004799 ORTHO05D005500 1.6e-73 280.0 220 74.1
Gohir.A01G177000 Gossypium hirsutum HOM05D004799 ORTHO05D005500 4.8e-73 278.5 233 71.2
Potri.001G209100 Populus trichocarpa HOM05D004799 ORTHO05D005500 1.4e-72 276.9 225 73.3
Gorai.002G208500 Gossypium raimondii HOM05D004799 ORTHO05D005500 5.3e-72 275.0 233 70.4
Gohir.D01G167800 Gossypium hirsutum HOM05D004799 ORTHO05D005500 9.0e-72 274.2 233 70.4
Sabra01G0161300 Salix brachista HOM05D004799 ORTHO05D005500 1.2e-71 273.9 237 70.0
Sabra03G0013400 Salix brachista HOM05D004799 ORTHO05D005500 2.9e-70 269.2 220 70.5
Haze_01626 Corylus avellana HOM05D004799 ORTHO05D005500 3.8e-70 268.9 238 68.5
Cfa005544 Carpinus fangiana HOM05D004799 ORTHO05D005500 6.4e-70 268.1 237 69.2
CiPaw.06G148900 Carya illinoinensis HOM05D004799 ORTHO05D005500 7.1e-69 264.6 240 66.7
Potri.003G021500 Populus trichocarpa HOM05D004799 ORTHO05D005500 1.6e-68 263.5 218 70.2
QL02p098623 Quercus lobata HOM05D004799 ORTHO05D005500 1.6e-68 263.5 256 64.1
CiPaw.05G042800 Carya illinoinensis HOM05D004799 ORTHO05D005500 3.5e-68 262.3 278 59.7
GSVIVG01023017001 Vitis vinifera HOM05D004799 ORTHO05D005500 1.3e-67 260.4 230 65.2
Ciclev10002345m.g Citrus clementina HOM05D004799 ORTHO05D005500 2.3e-67 259.6 239 66.1
FAN13G3307 Fragaria x ananassa HOM05D004799 ORTHO05D005500 5.1e-67 258.5 232 66.8
FvH4_5g30080 Fragaria vesca HOM05D004799 ORTHO05D005500 6.7e-67 258.1 232 66.8
Eucgr.I02711 Eucalyptus grandis HOM05D004799 ORTHO05D005500 1.1e-66 257.3 228 67.1
FAN04G2475 Fragaria x ananassa HOM05D004799 ORTHO05D005500 3.3e-66 255.8 233 66.5
Gohir.A03G210900 Gossypium hirsutum HOM05D004799 ORTHO05D005500 3.3e-66 255.8 234 65.0
Atru.chr6.1081 Acer truncatum HOM05D004799 ORTHO05D005500 3.7e-65 252.3 226 68.1
FAN18G4597 Fragaria x ananassa HOM05D004799 ORTHO05D005500 1.1e-64 250.8 241 64.3
RcHm_v2.0_Chr7g0224271 Rosa chinensis HOM05D004799 ORTHO05D005500 1.4e-64 250.4 232 66.8
MD08G1225100 Malus domestica HOM05D004799 ORTHO05D005500 3.1e-64 249.2 238 67.2
Dinv19352 Davidia involucrata HOM05D004799 ORTHO05D005500 5.3e-64 248.4 236 66.5
Sopen01g046960 Solanum pennellii HOM05D004799 ORTHO05D005500 1.2e-63 247.3 235 65.5
PGSC0003DMG400023776 Solanum tuberosum HOM05D004799 ORTHO05D005500 1.2e-63 247.3 235 65.5
Lj5A248T74 Lonicera japonica HOM05D004799 ORTHO05D005500 3.4e-63 245.7 237 66.2
Hma1.2p1_0217F.1_g091930 Hydrangea macrophylla HOM05D004799 ORTHO05D005500 7.6e-63 244.6 238 65.5
MD15G1418700 Malus domestica HOM05D004799 ORTHO05D005500 7.6e-63 244.6 237 62.9
Thecc.02G041200 Theobroma cacao HOM05D004799 ORTHO05D005500 1.3e-62 243.8 234 66.7
Peaxi162Scf00011g00139 Petunia axillaris HOM05D004799 ORTHO05D005500 2.9e-62 242.7 225 67.6
Lalb_Chr12g0204381 Lupinus albus HOM05D004799 ORTHO05D005500 3.8e-62 242.3 240 62.5
ClCG09G016220 Citrullus lanatus HOM05D004799 ORTHO05D005500 4.9e-62 241.9 219 68.0
TAR628G0692 Trochodendron aralioides HOM05D004799 ORTHO05D005500 6.5e-62 241.5 231 63.6
Sc14g0006850 Simmondsia chinensis HOM05D004799 ORTHO05D005500 8.4e-62 241.1 226 61.5
TWI59G1038 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 3.2e-61 239.2 220 66.4
Lalb_Chr07g0185691 Lupinus albus HOM05D004799 ORTHO05D005500 4.2e-61 238.8 240 62.5
arahy.Tifrunner.gnm1.ann1.ZS42GJ Arachis hypogaea HOM05D004799 ORTHO05D005500 7.1e-61 238.0 230 64.8
TAR376G0767 Trochodendron aralioides HOM05D004799 ORTHO05D005500 9.3e-61 237.7 235 61.3
arahy.Tifrunner.gnm1.ann1.BG3XJE Arachis hypogaea HOM05D004799 ORTHO05D005500 2.1e-60 236.5 231 64.5
CsaV3_5G024750 Cucumis sativus L. HOM05D004799 ORTHO05D005500 3.5e-60 235.7 220 65.5
THA.LOC104809537 Tarenaya hassleriana HOM05D004799 ORTHO05D005500 1.0e-59 234.2 223 64.6
Gohir.D02G232500 Gossypium hirsutum HOM05D004799 ORTHO05D005500 3.0e-59 232.6 234 60.7
vmacro01776 Vaccinium macrocarpon HOM05D004799 ORTHO05D005500 3.9e-59 232.3 258 57.8
CsaV3_7G007080 Cucumis sativus L. HOM05D004799 ORTHO05D005500 5.1e-59 231.9 223 63.2
Gorai.005G260300 Gossypium raimondii HOM05D004799 ORTHO05D005500 6.7e-59 231.5 234 60.3
MELO3C018586.2 Cucumis melo HOM05D004799 ORTHO05D005500 1.5e-58 230.3 224 63.8
CAN.G1352.25 Capsicum annuum HOM05D004799 ORTHO05D005500 2.5e-58 229.6 229 63.3
Carub.0001s1103 Capsella rubella HOM05D004799 ORTHO05D005500 4.3e-58 228.8 235 62.1
Cc02_g22290 Coffea canephora HOM05D004799 ORTHO05D005500 1.6e-57 226.9 223 63.7
Dinv24262 Davidia involucrata HOM05D004799 ORTHO05D005500 2.1e-57 226.5 230 63.0
MSTRG.27841 Avicennia marina HOM05D004799 ORTHO05D005500 6.3e-57 224.9 217 64.1
Medtr2g007770 Medicago truncatula HOM05D004799 ORTHO05D005500 6.3e-57 224.9 214 63.6
Migut.B00668 Erythranthe guttata HOM05D004799 ORTHO05D005500 8.2e-57 224.6 231 59.3
FAN08G0327 Fragaria x ananassa HOM05D004799 ORTHO05D005500 1.4e-56 223.8 232 60.8
TWI23G0644 Tripterygium wilfordii HOM05D004799 ORTHO05D005500 1.4e-56 223.8 237 60.8
Aa31LG1G3310 Aethionema arabicum HOM05D004799 ORTHO05D005500 1.8e-56 223.4 227 59.9
AUR62018552 Chenopodium quinoa HOM05D004799 ORTHO05D005500 2.4e-56 223.0 235 57.4
Lj6g0003329 Lotus japonicus HOM05D004799 ORTHO05D005500 4.1e-56 222.2 208 64.4
Aqoxy6G00151 Aquilegia oxysepala HOM05D004799 ORTHO05D005500 6.9e-56 221.5 218 62.4
Ah.04g149450 Amaranthus hybridus HOM05D004799 ORTHO05D005500 2.6e-55 219.5 228 59.2
Sed0004816 Sechium edule HOM05D004799 ORTHO05D005500 4.5e-55 218.8 236 60.2
BcaB03g13259 Brassica carinata HOM05D004799 ORTHO05D005500 1.0e-54 217.6 222 59.5
Lsat_1_v5_gn_9_116381 Lactuca sativa HOM05D004799 ORTHO05D005500 1.3e-54 217.2 224 60.7
AUR62020867 Chenopodium quinoa HOM05D004799 ORTHO05D005500 1.7e-54 216.9 235 56.2
TPR.G2141 Trifolium pratense HOM05D004799 ORTHO05D005500 2.2e-54 216.5 234 59.4
CANSAT11G1940 Cannabis sativa HOM05D004799 ORTHO05D005500 2.9e-54 216.1 240 57.5
EL10Ac3g07450 Beta vulgaris HOM05D004799 ORTHO05D005500 3.8e-54 215.7 234 57.7
Oeu012743.2 Olea europaea HOM05D004799 ORTHO05D005500 3.8e-54 215.7 248 57.3
Nitab4.5_0010140g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 6.5e-54 214.9 220 60.9
Psat1g220000 Pisum sativum HOM05D004799 ORTHO05D005500 1.1e-53 214.2 216 62.0
BraA08t35264Z Brassica rapa HOM05D004799 ORTHO05D005500 1.4e-53 213.8 221 59.7
A08p33480 Brassica napus HOM05D004799 ORTHO05D005500 1.9e-53 213.4 219 59.8
Sp1g10030 Schrenkiella parvula HOM05D004799 ORTHO05D005500 3.2e-53 212.6 222 59.9
Glyma.08G128300 Glycine max HOM05D004799 ORTHO05D005500 4.2e-53 212.2 224 59.4
SGA_v2.0_scaffold110G31288 Striga asiatica HOM05D004799 ORTHO05D005500 2.7e-52 209.5 232 55.2
Oeu008877.2 Olea europaea HOM05D004799 ORTHO05D005500 4.6e-52 208.8 262 53.4
VMungo0251G3647 Vigna mungo HOM05D004799 ORTHO05D005500 6.1e-52 208.4 224 58.0
C08p14470 Brassica napus HOM05D004799 ORTHO05D005500 7.9e-52 208.0 221 58.8
HanXRQChr03g0066881 Helianthus annuus HOM05D004799 ORTHO05D005500 1.0e-51 207.6 229 57.2
Actinidia00218 Actinidia chinensis HOM05D004799 ORTHO05D005500 1.3e-51 207.2 231 60.6
DCAR_005625 Daucus carota HOM05D004799 ORTHO05D005500 3.9e-51 205.7 216 58.8
Actinidia39055 Actinidia chinensis HOM05D004799 ORTHO05D005500 5.1e-51 205.3 192 66.1
Hund19012 Selenicereus undatus HOM05D004799 ORTHO05D005500 6.7e-51 204.9 235 53.6
BcaC07g38663 Brassica carinata HOM05D004799 ORTHO05D005500 8.7e-51 204.5 221 57.9
BolC8t49096H Brassica oleracea HOM05D004799 ORTHO05D005500 8.7e-51 204.5 221 57.9
Rhsim11G0131600 Rhododendron simsii HOM05D004799 ORTHO05D005500 1.9e-50 203.4 332 44.9
AL1G22490 Arabidopsis lyrata HOM05D004799 ORTHO05D005500 2.5e-50 203.0 216 58.3
ATR0684G092 Amborella trichopoda HOM05D004799 ORTHO05D005500 7.4e-50 201.4 224 58.5
COL.COLO4_17895 Corchorus olitorius HOM05D004799 ORTHO05D005500 7.4e-50 201.4 233 58.8
CSS0024882 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 2.4e-48 196.4 188 64.9
CSS0037217 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 2.4e-48 196.4 188 64.9
CARHR011640 Cardamine hirsuta HOM05D004799 ORTHO05D005500 6.9e-48 194.9 228 54.8
HPP92_019221 Vanilla planifolia HOM05D004799 ORTHO05D005500 6.9e-48 194.9 220 55.9
Glyma.05G170200 Glycine max HOM05D004799 ORTHO05D005500 9.1e-48 194.5 228 57.0
BcaC05g25015 Brassica carinata HOM05D004799 ORTHO05D005500 1.2e-47 194.1 231 55.4
A06p08020 Brassica napus HOM05D004799 ORTHO05D005500 1.2e-47 194.1 232 55.2
C05p09620 Brassica napus HOM05D004799 ORTHO05D005500 1.2e-47 194.1 231 55.4
BolC5t29704H Brassica oleracea HOM05D004799 ORTHO05D005500 1.2e-47 194.1 231 55.4
BraA06t24001Z Brassica rapa HOM05D004799 ORTHO05D005500 1.2e-47 194.1 232 55.2
Nitab4.5_0005539g0010 Nicotiana tabacum HOM05D004799 ORTHO05D005500 2.0e-47 193.4 220 56.8
Ca_00089_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 5.9e-47 191.8 268 48.9
Ca_29928_v3 Cicer arietinum L. HOM05D004799 ORTHO05D005500 5.9e-47 191.8 268 48.9
AT1G11400 Arabidopsis thaliana HOM05D004799 ORTHO05D005500 1.3e-46 190.7 221 54.8
unitig_26.g9556 Utricularia gibba HOM05D004799 ORTHO05D005500 2.9e-46 189.5 217 56.2
PSO528G0257 Papaver somniferum HOM05D004799 ORTHO05D005500 7.2e-45 184.9 215 55.8
Phvul.002G251000 Phaseolus vulgaris HOM05D004799 ORTHO05D005500 1.6e-44 183.7 221 52.9
Lsat_1_v5_gn_7_77960 Lactuca sativa HOM05D004799 ORTHO05D005500 2.7e-44 183.0 224 53.1
Nn5g28066 Nelumbo nucifera HOM05D004799 ORTHO05D005500 4.6e-44 182.2 182 58.2
Thhalv10008698m.g Eutrema salsugineum HOM05D004799 ORTHO05D005500 6.1e-44 181.8 221 52.0
Os03g0262100 Oryza sativa ssp. japonica HOM05D004799 ORTHO05D005500 5.7e-42 175.3 208 52.4
Zm00001eb011470 Zea mays HOM05D004799 ORTHO05D005500 9.7e-42 174.5 212 53.3
CDE02G4357 Ceratophyllum demersum HOM05D004799 ORTHO05D005500 1.3e-38 164.1 214 48.6
PSO170G0171 Papaver somniferum HOM05D004799 ORTHO05D005500 2.9e-38 162.9 217 51.6
Nn1g08619 Nelumbo nucifera HOM05D004799 ORTHO05D005500 6.7e-35 151.8 169 57.4
SalBow6G1776 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.5e-34 150.6 222 46.8
SalBow6G5744 Salvia bowleyana HOM05D004799 ORTHO05D005500 1.5e-34 150.6 222 46.8
MBI03_g11149_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 3.3e-34 149.4 308 41.6
Prupe.1G562800 Prunus persica HOM05D004799 ORTHO05D005500 6.3e-33 145.2 167 59.3
MSTRG.16532 Avicennia marina HOM05D004799 ORTHO05D005500 3.1e-32 142.9 155 55.5
HPP92_009361 Vanilla planifolia HOM05D004799 ORTHO05D005500 3.1e-32 142.9 221 45.2
ECA240G2283 Erigeron canadensis HOM05D004799 ORTHO05D005500 7.0e-32 141.7 216 47.2
Atru.chr6.1045 Acer truncatum HOM05D004799 ORTHO05D005500 8.5e-30 134.8 131 64.9
Glyma.14G170300 Glycine max HOM05D004799 ORTHO05D005500 2.5e-29 133.3 152 57.2
Mapoly0065s0027 Marchantia polymorpha HOM05D004799 ORTHO05D005500 1.0e-27 127.9 208 45.2
SEGI_10500 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 1.4e-27 127.5 94 73.4
CBR_g22015 Chara braunii HOM05D004799 ORTHO05D005500 4.5e-23 112.5 253 36.8
Lj9C308T7 Lonicera japonica HOM05D004799 ORTHO05D005500 8.5e-22 108.2 146 52.1
Ah.13g077920 Amaranthus hybridus HOM05D004799 ORTHO05D005500 1.2e-20 104.4 225 39.1
Zm00001eb398170 Zea mays HOM05D004799 ORTHO05D005500 4.4e-18 95.9 161 44.1
MBI03_g11127_MAGBIO Magnolia biondii HOM05D004799 ORTHO05D005500 3.1e-16 89.7 131 52.7
AagrBONN_evm.TU.Sc2ySwM_344.2060 Anthoceros agrestis HOM05D004799 ORTHO05D005500 5.9e-15 85.5 96 54.2
arahy.Tifrunner.gnm1.ann1.DUW5WJ Arachis hypogaea HOM05D004799 ORTHO05D005500 2.5e-13 80.1 79 64.6
GSVIVG01013911001 Vitis vinifera HOM05D004799 ORTHO05D005500 1.0e-11 74.7 88 48.9
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 6.8e-11 72.0 239 33.5
BcaB03g13258 Brassica carinata HOM05D004799 ORTHO05D005500 2.6e-10 70.1 91 50.5
SMO367G0479 Selaginella moellendorffii HOM05D004799 ORTHO05D005500 3.7e-09 66.2 40 77.5
A09p63310 Brassica napus HOM05D004799 ORTHO05D005500 1.1e-08 64.7 53 64.2
BraA09t41682Z Brassica rapa HOM05D004799 ORTHO05D005500 1.1e-08 64.7 53 64.2
Pp3c4_27250 Physcomitrium patens HOM05D004799 ORTHO05D005500 5.4e-08 62.4 154 33.8
CSS0012117 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 7.0e-08 62.0 43 72.1
Lj5A252G43 Lonicera japonica HOM05D012292 ORTHO05D012234 7.0e-08 62.0 86 41.9
CSS0018254 Camellia sinensis var. sinensis HOM05D004799 ORTHO05D005500 1.6e-07 60.8 43 72.1
Ah.13g066130 Amaranthus hybridus HOM05D004799 ORTHO05D005500 3.8e-06 56.2 73 45.2
SEGI_00858 Sequoiadendron giganteum HOM05D004799 ORTHO05D005500 6.6e-06 55.5 122 36.9


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