Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G169401 Manihot esculenta HOM05D004119 ORTHO05D004797 1.8e-59 232.3 108 100.0
QL01p009105 Quercus lobata HOM05D004119 ORTHO05D004797 1.1e-48 196.4 107 86.0
Manes.14G015300 Manihot esculenta HOM05D004119 ORTHO05D004797 1.4e-48 196.1 107 86.0
CiPaw.14G126500 Carya illinoinensis HOM05D004119 ORTHO05D004797 1.9e-48 195.7 107 85.0
Atru.chr3.2433 Acer truncatum HOM05D004119 ORTHO05D004797 3.2e-48 194.9 107 85.0
Atru.chr3.2434 Acer truncatum HOM05D004119 ORTHO05D004797 3.2e-48 194.9 107 85.0
CiPaw.13G168300 Carya illinoinensis HOM05D004119 ORTHO05D004797 3.2e-48 194.9 106 85.8
Prupe.6G017800 Prunus persica HOM05D004119 ORTHO05D004797 3.2e-48 194.9 107 85.0
COL.COLO4_10388 Corchorus olitorius HOM05D004119 ORTHO05D004797 4.2e-48 194.5 107 86.0
RcHm_v2.0_Chr5g0079021 Rosa chinensis HOM05D004119 ORTHO05D004797 4.2e-48 194.5 106 85.8
Haze_23030 Corylus avellana HOM05D004119 ORTHO05D004797 7.1e-48 193.7 107 85.0
Cpa.g.sc117.3 Carica papaya HOM05D004119 ORTHO05D004797 9.3e-48 193.4 107 85.0
RcHm_v2.0_Chr5g0079321 Rosa chinensis HOM05D004119 ORTHO05D004797 9.3e-48 193.4 106 84.9
CANSAT54G1702 Cannabis sativa HOM05D004119 ORTHO05D004797 1.6e-47 192.6 107 86.0
Thecc.09G219300 Theobroma cacao HOM05D004119 ORTHO05D004797 1.6e-47 192.6 107 84.1
Ciclev10014571m.g Citrus clementina HOM05D004119 ORTHO05D004797 2.1e-47 192.2 107 84.1
DCAR_002029 Daucus carota HOM05D004119 ORTHO05D004797 2.7e-47 191.8 107 84.1
TWI32G0563 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 2.7e-47 191.8 107 84.1
Potri.001G013900 Populus trichocarpa HOM05D004119 ORTHO05D004797 3.5e-47 191.4 107 81.3
TAR623G1465 Trochodendron aralioides HOM05D004119 ORTHO05D004797 3.5e-47 191.4 107 83.2
Eucgr.B02600 Eucalyptus grandis HOM05D004119 ORTHO05D004797 6.0e-47 190.7 107 83.2
Phvul.007G003400 Phaseolus vulgaris HOM05D004119 ORTHO05D004797 6.0e-47 190.7 107 82.2
CSS0046641 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 7.9e-47 190.3 107 84.1
Hund21812 Selenicereus undatus HOM05D004119 ORTHO05D004797 7.9e-47 190.3 107 84.1
VMungo0720G1960 Vigna mungo HOM05D004119 ORTHO05D004797 7.9e-47 190.3 107 82.2
Sabra01G0010200 Salix brachista HOM05D004119 ORTHO05D004797 1.0e-46 189.9 107 80.4
Dinv36315 Davidia involucrata HOM05D004119 ORTHO05D004797 1.3e-46 189.5 107 83.2
FAN16G3698 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.3e-46 189.5 106 83.0
FAN21G0229 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.3e-46 189.5 106 83.0
GSVIVG01025352001 Vitis vinifera HOM05D004119 ORTHO05D004797 1.3e-46 189.5 107 82.2
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 1.8e-46 189.1 107 80.4
FvH4_3g43840 Fragaria vesca HOM05D004119 ORTHO05D004797 1.8e-46 189.1 106 82.1
FAN11G1732 Fragaria x ananassa HOM05D004119 ORTHO05D004797 1.8e-46 189.1 106 82.1
Lalb_Chr21g0307631 Lupinus albus HOM05D004119 ORTHO05D004797 2.3e-46 188.7 107 82.2
THA.LOC104811125 Tarenaya hassleriana HOM05D004119 ORTHO05D004797 2.3e-46 188.7 107 82.2
ClCG03G013650 Citrullus lanatus HOM05D004119 ORTHO05D004797 3.0e-46 188.3 107 83.2
Glyma.20G246800 Glycine max HOM05D004119 ORTHO05D004797 3.0e-46 188.3 107 80.4
Lj5g0022671 Lotus japonicus HOM05D004119 ORTHO05D004797 3.0e-46 188.3 107 81.3
Medtr1g116875 Medicago truncatula HOM05D004119 ORTHO05D004797 3.0e-46 188.3 107 80.4
Hma1.2p1_1169F.1_g263240 Hydrangea macrophylla HOM05D004119 ORTHO05D004797 3.9e-46 188.0 107 81.3
Duzib168G2002 Durio zibethinus HOM05D004119 ORTHO05D004797 5.1e-46 187.6 107 81.3
Actinidia06316 Actinidia chinensis HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 81.3
MELO3C015675.2 Cucumis melo HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 82.2
CsaV3_1G042400 Cucumis sativus L. HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 82.2
FAN25G0197 Fragaria x ananassa HOM05D004119 ORTHO05D004797 6.7e-46 187.2 106 82.1
Gohir.A08G012900 Gossypium hirsutum HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 82.2
Gohir.D08G023300 Gossypium hirsutum HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 82.2
Gorai.004G018600 Gossypium raimondii HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 82.2
Rhsim01G0187100 Rhododendron simsii HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 82.2
Sed0006721 Sechium edule HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 81.3
TPR.G8893 Trifolium pratense HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 80.4
TWI60G0817 Tripterygium wilfordii HOM05D004119 ORTHO05D004797 6.7e-46 187.2 107 82.2
Sc16g0011910 Simmondsia chinensis HOM05D004119 ORTHO05D004797 8.7e-46 186.8 105 82.9
vmacro12703 Vaccinium macrocarpon HOM05D004119 ORTHO05D004797 8.7e-46 186.8 107 81.3
CAN.G649.14 Capsicum annuum HOM05D004119 ORTHO05D004797 1.1e-45 186.4 107 80.4
Thhalv10012956m.g Eutrema salsugineum HOM05D004119 ORTHO05D004797 1.1e-45 186.4 107 81.3
AT5G13030 Arabidopsis thaliana HOM05D004119 ORTHO05D004797 1.5e-45 186.0 107 81.3
CARHR200430 Cardamine hirsuta HOM05D004119 ORTHO05D004797 1.5e-45 186.0 107 81.3
Lalb_Chr02g0144391 Lupinus albus HOM05D004119 ORTHO05D004797 1.5e-45 186.0 106 81.1
HanXRQChr02g0056721 Helianthus annuus HOM05D004119 ORTHO05D004797 1.9e-45 185.7 107 78.5
AUR62000053 Chenopodium quinoa HOM05D004119 ORTHO05D004797 2.5e-45 185.3 107 81.3
AUR62019225 Chenopodium quinoa HOM05D004119 ORTHO05D004797 2.5e-45 185.3 107 81.3
Lj1A436T13 Lonicera japonica HOM05D004119 ORTHO05D004797 2.5e-45 185.3 107 81.3
Lj1C433G5 Lonicera japonica HOM05D004119 ORTHO05D004797 2.5e-45 185.3 107 81.3
PGSC0003DMG400032205 Solanum tuberosum HOM05D004119 ORTHO05D004797 2.5e-45 185.3 107 80.4
MD11G1020700 Malus domestica HOM05D004119 ORTHO05D004797 3.3e-45 184.9 107 83.2
Nitab4.5_0001568g0150 Nicotiana tabacum HOM05D004119 ORTHO05D004797 3.3e-45 184.9 107 79.4
Peaxi162Scf00403g00212 Petunia axillaris HOM05D004119 ORTHO05D004797 3.3e-45 184.9 107 79.4
AL6G23620 Arabidopsis lyrata HOM05D004119 ORTHO05D004797 4.3e-45 184.5 107 80.4
Carub.0006s1120 Capsella rubella HOM05D004119 ORTHO05D004797 4.3e-45 184.5 107 80.4
Sed0015121 Sechium edule HOM05D004119 ORTHO05D004797 4.3e-45 184.5 107 79.4
SGA_v2.0_scaffold3G01554 Striga asiatica HOM05D004119 ORTHO05D004797 4.3e-45 184.5 107 79.4
MD03G1018700 Malus domestica HOM05D004119 ORTHO05D004797 5.6e-45 184.1 107 83.2
Aa31LG3G14630 Aethionema arabicum HOM05D004119 ORTHO05D004797 9.6e-45 183.3 107 79.4
Nitab4.5_0001146g0130 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.3e-44 183.0 107 79.4
PSO339G4050 Papaver somniferum HOM05D004119 ORTHO05D004797 1.3e-44 183.0 106 80.2
PSO384G1641 Papaver somniferum HOM05D004119 ORTHO05D004797 1.3e-44 183.0 107 80.4
Lsat_1_v5_gn_6_49801 Lactuca sativa HOM05D004119 ORTHO05D004797 1.6e-44 182.6 107 76.6
MSTRG.12487 Avicennia marina HOM05D004119 ORTHO05D004797 2.1e-44 182.2 107 78.5
Nn2g15648 Nelumbo nucifera HOM05D004119 ORTHO05D004797 2.1e-44 182.2 107 78.5
PGR119G0026 Punica granatum HOM05D004119 ORTHO05D004797 2.1e-44 182.2 107 77.6
Sp6g30940 Schrenkiella parvula HOM05D004119 ORTHO05D004797 2.1e-44 182.2 104 81.7
ECA233G2530 Erigeron canadensis HOM05D004119 ORTHO05D004797 2.8e-44 181.8 107 75.7
Migut.N02286 Erythranthe guttata HOM05D004119 ORTHO05D004797 2.8e-44 181.8 107 78.5
Solyc01g006490.4 Solanum lycopersicum HOM05D004119 ORTHO05D004797 3.7e-44 181.4 107 78.5
Peaxi162Scf00062g01417 Petunia axillaris HOM05D004119 ORTHO05D004797 4.8e-44 181.0 107 76.6
Psat3g017080 Pisum sativum HOM05D004119 ORTHO05D004797 4.8e-44 181.0 107 77.6
Cc01_g03810 Coffea canephora HOM05D004119 ORTHO05D004797 6.2e-44 180.6 107 77.6
Aqoxy2G00086 Aquilegia oxysepala HOM05D004119 ORTHO05D004797 8.2e-44 180.3 107 78.5
Sopen01g002470 Solanum pennellii HOM05D004119 ORTHO05D004797 8.2e-44 180.3 107 77.6
Nitab4.5_0004389g0050 Nicotiana tabacum HOM05D004119 ORTHO05D004797 1.1e-43 179.9 107 74.8
Oeu043306.1 Olea europaea HOM05D004119 ORTHO05D004797 1.4e-43 179.5 107 79.4
Psat6g242880 Pisum sativum HOM05D004119 ORTHO05D004797 1.4e-43 179.5 107 78.5
A10p25160 Brassica napus HOM05D004119 ORTHO05D004797 1.8e-43 179.1 108 79.6
C09p64070 Brassica napus HOM05D004119 ORTHO05D004797 1.8e-43 179.1 108 79.6
BolC9t59244H Brassica oleracea HOM05D004119 ORTHO05D004797 1.8e-43 179.1 108 79.6
BraA10t44578Z Brassica rapa HOM05D004119 ORTHO05D004797 1.8e-43 179.1 108 79.6
PGR119G0420 Punica granatum HOM05D004119 ORTHO05D004797 4.0e-43 177.9 107 75.7
MSTRG.18400 Avicennia marina HOM05D004119 ORTHO05D004797 6.9e-43 177.2 106 77.4
Gohir.A05G066800 Gossypium hirsutum HOM05D004119 ORTHO05D004797 6.9e-43 177.2 106 78.3
Gohir.D05G069700 Gossypium hirsutum HOM05D004119 ORTHO05D004797 6.9e-43 177.2 106 78.3
Zm00001eb381770 Zea mays HOM05D004119 ORTHO05D004797 6.9e-43 177.2 107 74.8
Oeu055814.1 Olea europaea HOM05D004119 ORTHO05D004797 9.0e-43 176.8 107 78.5
BcaB01g05381 Brassica carinata HOM05D004119 ORTHO05D004797 1.2e-42 176.4 108 77.8
C03p06720 Brassica napus HOM05D004119 ORTHO05D004797 1.2e-42 176.4 108 77.8
A03p05770 Brassica napus HOM05D004119 ORTHO05D004797 1.5e-42 176.0 107 79.4
BraA03t09916Z Brassica rapa HOM05D004119 ORTHO05D004797 1.5e-42 176.0 107 79.4
HanXRQChr11g0345481 Helianthus annuus HOM05D004119 ORTHO05D004797 1.5e-42 176.0 106 75.5
ATR0605G198 Amborella trichopoda HOM05D004119 ORTHO05D004797 2.0e-42 175.6 107 76.6
Gorai.009G070700 Gossypium raimondii HOM05D004119 ORTHO05D004797 2.6e-42 175.3 106 77.4
Psat3g137640 Pisum sativum HOM05D004119 ORTHO05D004797 3.4e-42 174.9 107 74.8
ECA248G2677 Erigeron canadensis HOM05D004119 ORTHO05D004797 7.6e-42 173.7 106 75.5
BolC3t13178H Brassica oleracea HOM05D004119 ORTHO05D004797 1.3e-41 172.9 108 75.9
unitig_22.g6210 Utricularia gibba HOM05D004119 ORTHO05D004797 1.7e-41 172.6 99 79.8
Os06g0320700 Oryza sativa ssp. japonica HOM05D004119 ORTHO05D004797 2.2e-41 172.2 107 72.0
CAN.G575.41 Capsicum annuum HOM05D004119 ORTHO05D004797 2.9e-41 171.8 106 72.6
Lj2C671G7 Lonicera japonica HOM05D004119 ORTHO05D004797 6.5e-41 170.6 107 75.7
HanXRQChr13g0404241 Helianthus annuus HOM05D004119 ORTHO05D004797 8.4e-41 170.2 107 74.8
MBI04_g46409_MAGBIO Magnolia biondii HOM05D004119 ORTHO05D004797 8.4e-41 170.2 106 76.4
SalBow2G0171 Salvia bowleyana HOM05D004119 ORTHO05D004797 2.5e-40 168.7 132 64.4
CDE04G3728 Ceratophyllum demersum HOM05D004119 ORTHO05D004797 4.2e-40 167.9 108 73.1
Oeu024459.1 Olea europaea HOM05D004119 ORTHO05D004797 1.2e-39 166.4 107 72.9
Sopen12g034830 Solanum pennellii HOM05D004119 ORTHO05D004797 2.7e-39 165.2 107 72.0
Lsat_1_v5_gn_1_68000 Lactuca sativa HOM05D004119 ORTHO05D004797 7.9e-39 163.7 107 72.0
Solyc12g100200.2 Solanum lycopersicum HOM05D004119 ORTHO05D004797 1.0e-38 163.3 107 71.0
HPP92_018953 Vanilla planifolia HOM05D004119 ORTHO05D004797 2.3e-38 162.2 107 72.0
SEGI_31462 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 6.7e-38 160.6 106 67.9
SEGI_38661 Sequoiadendron giganteum HOM05D004119 ORTHO05D004797 8.7e-38 160.2 105 68.6
FvH4_3g45150 Fragaria vesca HOM05D004119 ORTHO05D004797 2.2e-36 155.6 96 77.1
Mapoly0063s0012 Marchantia polymorpha HOM05D004119 ORTHO05D004797 4.8e-36 154.5 87 78.2
CSS0049397 Camellia sinensis var. sinensis HOM05D004119 ORTHO05D004797 1.4e-35 152.9 79 87.3
Pp3c9_22190 Physcomitrium patens HOM05D004119 ORTHO05D004797 3.1e-35 151.8 112 64.3
SMO134G0253 Selaginella moellendorffii HOM05D004119 ORTHO05D004797 3.1e-35 151.8 102 68.6
arahy.Tifrunner.gnm1.ann1.ZPWD91 Arachis hypogaea HOM05D004119 ORTHO05D004797 4.1e-35 151.4 80 85.0
AagrBONN_evm.TU.Sc2ySwM_344.3798 Anthoceros agrestis HOM05D004119 ORTHO05D004797 1.2e-34 149.8 88 76.1
CBR_g38091 Chara braunii HOM05D004119 ORTHO05D004797 6.5e-33 144.1 85 77.6
VMungo0720G3038 Vigna mungo HOM05D004119 ORTHO05D004797 4.3e-29 131.3 74 81.1
Cre16.g648900 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 1.5e-21 106.3 91 54.9
Lj1P432T25 Lonicera japonica HOM05D004119 ORTHO05D004797 2.0e-21 105.9 49 91.8
Glyma.10G296266 Glycine max HOM05D004119 ORTHO05D004797 1.4e-19 99.8 49 85.7
Cre02.g108250 Chlamydomonas reinhardtii HOM05D004119 ORTHO05D004797 3.4e-18 95.1 80 56.2
PRCOL_00005150 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 2.2e-17 92.4 81 55.6
EL10Ac4g10322 Beta vulgaris HOM05D004119 ORTHO05D004797 2.9e-17 92.0 63 73.0
PRCOL_00001378 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 8.5e-17 90.5 85 49.4
TAR369G0199 Trochodendron aralioides HOM05D004119 ORTHO05D004797 1.6e-15 86.3 56 75.0
Cfa025573 Carpinus fangiana HOM05D004119 ORTHO05D004797 2.1e-15 85.9 83 49.4
Pp3s34_210 Physcomitrium patens HOM05D000198 ORTHO05D004797 4.7e-15 84.7 88 45.5
Dinv08059 Davidia involucrata HOM05D004119 ORTHO05D004797 1.1e-11 73.6 49 71.4
Actinidia39374 Actinidia chinensis HOM05D004119 ORTHO05D004797 2.0e-10 69.3 67 62.7
MCO09G196 Micromonas commoda HOM05D004119 ORTHO05D004797 1.0e-09 67.0 88 39.8
PRCOL_00005494 Prasinoderma coloniale HOM05D004119 ORTHO05D004797 4.2e-08 61.6 99 31.3


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