Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.06G114000 Manihot esculenta HOM05D006807 ORTHO05D008528 3.7e-90 334.7 153 100.0
Nn4g22485 Nelumbo nucifera HOM05D006807 ORTHO05D008528 3.3e-30 135.6 195 42.1
FvH4_5g07080 Fragaria vesca HOM05D006807 ORTHO05D008528 5.6e-30 134.8 195 41.0
FAN18G3349 Fragaria x ananassa HOM05D006807 ORTHO05D008528 5.6e-30 134.8 195 41.0
BcaB01g00811 Brassica carinata HOM05D006807 ORTHO05D008528 7.3e-30 134.4 177 42.4
FAN04G0573 Fragaria x ananassa HOM05D006807 ORTHO05D008528 9.5e-30 134.0 195 41.0
FAN08G1325 Fragaria x ananassa HOM05D006807 ORTHO05D008528 9.5e-30 134.0 195 41.0
FAN13G3089 Fragaria x ananassa HOM05D006807 ORTHO05D008528 9.5e-30 134.0 211 38.9
Hund18532 Selenicereus undatus HOM05D006807 ORTHO05D008528 9.5e-30 134.0 195 40.5
RcHm_v2.0_Chr7g0191471 Rosa chinensis HOM05D006807 ORTHO05D008528 1.6e-29 133.3 195 41.0
Sabra15G0111700 Salix brachista HOM05D006807 ORTHO05D008528 1.6e-29 133.3 92 67.4
Duzib205G0271 Durio zibethinus HOM05D006807 ORTHO05D008528 3.6e-29 132.1 92 66.3
MD14G1165700 Malus domestica HOM05D006807 ORTHO05D008528 6.2e-29 131.3 195 40.5
CARHR157170 Cardamine hirsuta HOM05D006807 ORTHO05D008528 8.0e-29 131.0 195 39.0
CSS0019908 Camellia sinensis var. sinensis HOM05D006807 ORTHO05D008528 1.0e-28 130.6 195 39.5
Aa31LG4G17000 Aethionema arabicum HOM05D006807 ORTHO05D008528 1.4e-28 130.2 92 64.1
arahy.Tifrunner.gnm1.ann1.Q2B2KY Arachis hypogaea HOM05D006807 ORTHO05D008528 1.4e-28 130.2 195 40.0
arahy.Tifrunner.gnm1.ann1.X96BEI Arachis hypogaea HOM05D006807 ORTHO05D008528 1.4e-28 130.2 195 40.0
A06p19250 Brassica napus HOM05D006807 ORTHO05D008528 1.4e-28 130.2 195 39.0
BraA06t25009Z Brassica rapa HOM05D006807 ORTHO05D008528 1.4e-28 130.2 195 39.0
Gohir.D12G190500 Gossypium hirsutum HOM05D006807 ORTHO05D008528 1.4e-28 130.2 92 65.2
Prupe.5G159400 Prunus persica HOM05D006807 ORTHO05D008528 1.4e-28 130.2 92 64.1
AL5G27820 Arabidopsis lyrata HOM05D006807 ORTHO05D008528 1.8e-28 129.8 195 39.0
Sp5g13620 Schrenkiella parvula HOM05D006807 ORTHO05D008528 1.8e-28 129.8 195 38.5
Thhalv10010480m.g Eutrema salsugineum HOM05D006807 ORTHO05D008528 2.3e-28 129.4 195 39.0
Potri.015G088900 Populus trichocarpa HOM05D006807 ORTHO05D008528 2.3e-28 129.4 92 65.2
QL10p005592 Quercus lobata HOM05D006807 ORTHO05D008528 2.3e-28 129.4 92 64.1
Gohir.A12G187500 Gossypium hirsutum HOM05D006807 ORTHO05D008528 3.1e-28 129.0 92 65.2
Manes.14G056000 Manihot esculenta HOM05D006807 ORTHO05D008528 3.1e-28 129.0 180 42.2
PGR083G0032 Punica granatum HOM05D006807 ORTHO05D008528 3.1e-28 129.0 92 64.1
vmacro16698 Vaccinium macrocarpon HOM05D006807 ORTHO05D008528 3.1e-28 129.0 195 38.5
C08p23430 Brassica napus HOM05D006807 ORTHO05D008528 5.2e-28 128.3 195 39.0
BolC8t49971H Brassica oleracea HOM05D006807 ORTHO05D008528 5.2e-28 128.3 195 39.0
CiPaw.11G013300 Carya illinoinensis HOM05D006807 ORTHO05D008528 5.2e-28 128.3 196 38.8
Gorai.008G204300 Gossypium raimondii HOM05D006807 ORTHO05D008528 6.8e-28 127.9 92 64.1
Haze_07288 Corylus avellana HOM05D006807 ORTHO05D008528 8.9e-28 127.5 195 39.5
Dinv11117 Davidia involucrata HOM05D006807 ORTHO05D008528 8.9e-28 127.5 92 62.0
Nitab4.5_0002531g0140 Nicotiana tabacum HOM05D006807 ORTHO05D008528 8.9e-28 127.5 195 39.5
GSVIVG01007565001 Vitis vinifera HOM05D006807 ORTHO05D008528 8.9e-28 127.5 195 39.0
AT3G48425 Arabidopsis thaliana HOM05D006807 ORTHO05D008528 1.2e-27 127.1 195 37.9
COL.COLO4_04554 Corchorus olitorius HOM05D006807 ORTHO05D008528 1.5e-27 126.7 92 62.0
Lj9A473T62 Lonicera japonica HOM05D006807 ORTHO05D008528 1.5e-27 126.7 195 39.0
Thecc.03G121100 Theobroma cacao HOM05D006807 ORTHO05D008528 1.5e-27 126.7 92 64.1
MELO3C002326.2 Cucumis melo HOM05D006807 ORTHO05D008528 2.0e-27 126.3 92 62.0
Lj1g0024485 Lotus japonicus HOM05D006807 ORTHO05D008528 2.0e-27 126.3 92 63.0
Atru.chr9.992 Acer truncatum HOM05D006807 ORTHO05D008528 2.6e-27 125.9 107 55.1
Rhsim12G0171200 Rhododendron simsii HOM05D006807 ORTHO05D008528 2.6e-27 125.9 180 39.4
TWI14G0970 Tripterygium wilfordii HOM05D006807 ORTHO05D008528 2.6e-27 125.9 92 60.9
Carub.0005s1459 Capsella rubella HOM05D006807 ORTHO05D008528 3.4e-27 125.6 195 37.9
Glyma.04G191800 Glycine max HOM05D006807 ORTHO05D008528 4.4e-27 125.2 92 62.0
Phvul.009G169800 Phaseolus vulgaris HOM05D006807 ORTHO05D008528 4.4e-27 125.2 92 63.0
ClCG03G003400 Citrullus lanatus HOM05D006807 ORTHO05D008528 5.8e-27 124.8 92 62.0
Nitab4.5_0001360g0080 Nicotiana tabacum HOM05D006807 ORTHO05D008528 5.8e-27 124.8 92 62.0
Cc04_g10630 Coffea canephora HOM05D006807 ORTHO05D008528 7.5e-27 124.4 195 38.5
THA.LOC104821499 Tarenaya hassleriana HOM05D006807 ORTHO05D008528 7.5e-27 124.4 92 58.7
VMungo1309G2613 Vigna mungo HOM05D006807 ORTHO05D008528 7.5e-27 124.4 92 60.9
Os12g0279600 Oryza sativa ssp. japonica HOM05D006807 ORTHO05D008528 9.8e-27 124.0 106 58.5
PSO063G3624 Papaver somniferum HOM05D006807 ORTHO05D008528 9.8e-27 124.0 170 41.8
Sed0006468 Sechium edule HOM05D006807 ORTHO05D008528 9.8e-27 124.0 195 39.0
Aqoxy3G01322 Aquilegia oxysepala HOM05D006807 ORTHO05D008528 1.3e-26 123.6 195 37.9
Peaxi162Scf00089g00837 Petunia axillaris HOM05D006807 ORTHO05D008528 1.3e-26 123.6 177 41.2
Atru.chr9.1050 Acer truncatum HOM05D006807 ORTHO05D008528 1.7e-26 123.2 74 71.6
CDE02G3945 Ceratophyllum demersum HOM05D006807 ORTHO05D008528 1.7e-26 123.2 193 38.3
Ciclev10020730m.g Citrus clementina HOM05D006807 ORTHO05D008528 1.7e-26 123.2 92 60.9
Medtr3g075220 Medicago truncatula HOM05D006807 ORTHO05D008528 2.2e-26 122.9 90 63.3
TPR.G38619 Trifolium pratense HOM05D006807 ORTHO05D008528 2.9e-26 122.5 92 62.0
Lalb_Chr08g0236911 Lupinus albus HOM05D006807 ORTHO05D008528 3.7e-26 122.1 92 62.0
Solyc03g111600.4 Solanum lycopersicum HOM05D006807 ORTHO05D008528 3.7e-26 122.1 195 37.9
AUR62025746 Chenopodium quinoa HOM05D006807 ORTHO05D008528 4.9e-26 121.7 195 39.0
PSO017G6759 Papaver somniferum HOM05D006807 ORTHO05D008528 4.9e-26 121.7 107 54.2
Sopen03g030720 Solanum pennellii HOM05D006807 ORTHO05D008528 4.9e-26 121.7 195 37.9
TAR371G0294 Trochodendron aralioides HOM05D006807 ORTHO05D008528 4.9e-26 121.7 195 36.9
Hma1.2p1_0014F.1_g010010 Hydrangea macrophylla HOM05D006807 ORTHO05D008528 8.3e-26 120.9 92 58.7
Hma1.2p1_0014F.1_g010020 Hydrangea macrophylla HOM05D006807 ORTHO05D008528 8.3e-26 120.9 92 58.7
unitig_32.g11163 Utricularia gibba HOM05D006807 ORTHO05D008528 8.3e-26 120.9 212 36.3
CANSAT80G1796 Cannabis sativa HOM05D006807 ORTHO05D008528 1.1e-25 120.6 92 60.9
PSO478G3056 Papaver somniferum HOM05D006807 ORTHO05D008528 1.1e-25 120.6 107 54.2
Psat5g141120 Pisum sativum HOM05D006807 ORTHO05D008528 1.1e-25 120.6 92 60.9
Eucgr.B00162 Eucalyptus grandis HOM05D006807 ORTHO05D008528 1.4e-25 120.2 74 70.3
DCAR_023882 Daucus carota HOM05D006807 ORTHO05D008528 2.4e-25 119.4 195 38.5
PSO170G3265 Papaver somniferum HOM05D006807 ORTHO05D008528 2.4e-25 119.4 107 52.3
Migut.I00265 Erythranthe guttata HOM05D006807 ORTHO05D008528 3.2e-25 119.0 84 64.3
Lsat_1_v5_gn_4_78300 Lactuca sativa HOM05D006807 ORTHO05D008528 3.2e-25 119.0 92 55.4
Sc22g0003890 Simmondsia chinensis HOM05D006807 ORTHO05D008528 3.2e-25 119.0 92 59.8
MSTRG.11302 Avicennia marina HOM05D006807 ORTHO05D008528 5.4e-25 118.2 92 56.5
SHI17323 Sapria himalayana HOM05D006807 ORTHO05D008528 1.2e-24 117.1 74 70.3
HanXRQChr09g0272791 Helianthus annuus HOM05D006807 ORTHO05D008528 1.6e-24 116.7 92 54.3
EL10Ac7g18054 Beta vulgaris HOM05D006807 ORTHO05D008528 2.7e-24 115.9 195 36.9
SGA_v2.0_scaffold168G38478 Striga asiatica HOM05D006807 ORTHO05D008528 3.5e-24 115.5 92 56.5
HPP92_021433 Vanilla planifolia HOM05D006807 ORTHO05D008528 1.0e-23 114.0 76 68.4
HPP92_021415 Vanilla planifolia HOM05D006807 ORTHO05D008528 1.3e-23 113.6 74 68.9
HPP92_027094 Vanilla planifolia HOM05D006807 ORTHO05D008528 1.3e-23 113.6 74 68.9
ATR0824G221 Amborella trichopoda HOM05D006807 ORTHO05D008528 5.0e-23 111.7 177 34.5
ECA232G3921 Erigeron canadensis HOM05D005390 ORTHO05D007086 1.1e-22 110.5 195 33.3
Mapoly0101s0017 Marchantia polymorpha HOM05D006807 ORTHO05D008528 4.3e-22 108.6 92 54.3
SEGI_26035 Sequoiadendron giganteum HOM05D006807 ORTHO05D008528 4.3e-22 108.6 78 56.4
arahy.Tifrunner.gnm1.ann1.0JE8SP Arachis hypogaea HOM05D006807 ORTHO05D008528 2.8e-21 105.9 68 70.6
SMO133G0041 Selaginella moellendorffii HOM05D006807 ORTHO05D008528 5.2e-20 101.7 94 51.1
TAR374G0317 Trochodendron aralioides HOM05D006807 ORTHO05D008528 1.2e-19 100.5 92 51.1
Pp3c24_19470 Physcomitrium patens HOM05D006807 ORTHO05D008528 1.3e-18 97.1 93 46.2
QL10p005534 Quercus lobata HOM05D006807 ORTHO05D008528 4.9e-18 95.1 57 70.2


User provided reference genes

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