Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G174000 Manihot esculenta HOM05D004883 ORTHO05D005766 8.1e-64 246.9 123 100.0
Sabra02G0098900 Salix brachista HOM05D004883 ORTHO05D005766 6.6e-50 200.7 120 78.3
Psat1g147680 Pisum sativum HOM05D004883 ORTHO05D005766 5.6e-49 197.6 122 78.7
Potri.002G126200 Populus trichocarpa HOM05D004883 ORTHO05D005766 9.6e-49 196.8 120 75.8
Sabra14G0020100 Salix brachista HOM05D004883 ORTHO05D005766 6.2e-48 194.1 119 76.5
TPR.G3781 Trifolium pratense HOM05D004883 ORTHO05D005766 6.2e-48 194.1 122 77.0
TWI36G0538 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 6.2e-48 194.1 121 78.5
Haze_17525 Corylus avellana HOM05D004883 ORTHO05D005766 8.1e-48 193.7 119 78.2
Potri.014G029300 Populus trichocarpa HOM05D004883 ORTHO05D005766 1.1e-47 193.4 119 75.6
Lalb_Chr22g0355131 Lupinus albus HOM05D004883 ORTHO05D005766 3.1e-47 191.8 120 77.5
QL02p004805 Quercus lobata HOM05D004883 ORTHO05D005766 3.1e-47 191.8 119 75.6
Cpa.g.sc49.21 Carica papaya HOM05D004883 ORTHO05D005766 4.0e-47 191.4 123 74.0
Phvul.001G022000 Phaseolus vulgaris HOM05D004883 ORTHO05D005766 4.0e-47 191.4 122 74.6
Manes.18G037300 Manihot esculenta HOM05D004883 ORTHO05D005766 5.3e-47 191.0 123 74.0
PGR031G0707 Punica granatum HOM05D004883 ORTHO05D005766 5.3e-47 191.0 122 73.0
THA.LOC104822849 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 5.3e-47 191.0 123 74.0
COL.COLO4_26509 Corchorus olitorius HOM05D004883 ORTHO05D005766 1.2e-46 189.9 121 73.6
TWI56G0859 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 1.2e-46 189.9 120 77.5
Ca_13291_v3 Cicer arietinum L. HOM05D004883 ORTHO05D005766 1.5e-46 189.5 122 73.0
Glyma.14G082800 Glycine max HOM05D004883 ORTHO05D005766 1.5e-46 189.5 122 73.8
CiPaw.16G043800 Carya illinoinensis HOM05D004883 ORTHO05D005766 2.0e-46 189.1 119 77.3
Atru.chr13.693 Acer truncatum HOM05D004883 ORTHO05D005766 2.6e-46 188.7 119 73.1
TWI56G0476 Tripterygium wilfordii HOM05D004883 ORTHO05D005766 2.6e-46 188.7 120 77.5
Gohir.D01G108200 Gossypium hirsutum HOM05D004883 ORTHO05D005766 4.5e-46 188.0 119 73.9
Gorai.002G132400 Gossypium raimondii HOM05D004883 ORTHO05D005766 5.8e-46 187.6 120 74.2
arahy.Tifrunner.gnm1.ann1.09A9GY Arachis hypogaea HOM05D004883 ORTHO05D005766 7.6e-46 187.2 119 74.8
arahy.Tifrunner.gnm1.ann1.B0E7W8 Arachis hypogaea HOM05D004883 ORTHO05D005766 7.6e-46 187.2 119 74.8
Lj5g0012185 Lotus japonicus HOM05D004883 ORTHO05D005766 7.6e-46 187.2 122 72.1
Medtr1g019430 Medicago truncatula HOM05D004883 ORTHO05D005766 7.6e-46 187.2 122 73.0
Gorai.009G211700 Gossypium raimondii HOM05D004883 ORTHO05D005766 9.9e-46 186.8 120 73.3
Glyma.17G242300 Glycine max HOM05D004883 ORTHO05D005766 1.3e-45 186.4 122 73.0
Gohir.D05G205400 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.3e-45 186.4 120 73.3
Thecc.08G007300 Theobroma cacao HOM05D004883 ORTHO05D005766 1.3e-45 186.4 120 73.3
Gohir.A01G119900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.7e-45 186.0 120 72.5
VMungo0647G0758 Vigna mungo HOM05D004883 ORTHO05D005766 2.2e-45 185.7 122 73.0
GSVIVG01009495001 Vitis vinifera HOM05D004883 ORTHO05D005766 2.2e-45 185.7 122 73.0
Dinv35960 Davidia involucrata HOM05D004883 ORTHO05D005766 2.9e-45 185.3 122 72.1
Thhalv10003291m.g Eutrema salsugineum HOM05D004883 ORTHO05D005766 2.9e-45 185.3 119 73.9
BcaC04g21964 Brassica carinata HOM05D004883 ORTHO05D005766 3.8e-45 184.9 119 73.9
BcaC06g31741 Brassica carinata HOM05D004883 ORTHO05D005766 3.8e-45 184.9 119 73.9
A09p20040 Brassica napus HOM05D004883 ORTHO05D005766 3.8e-45 184.9 119 73.9
C09p25420 Brassica napus HOM05D004883 ORTHO05D005766 3.8e-45 184.9 119 73.9
BolC9t55441H Brassica oleracea HOM05D004883 ORTHO05D005766 3.8e-45 184.9 119 73.9
BraA09t37617Z Brassica rapa HOM05D004883 ORTHO05D005766 3.8e-45 184.9 119 73.9
Sp2g07620 Schrenkiella parvula HOM05D004883 ORTHO05D005766 3.8e-45 184.9 119 73.9
BcaB07g31037 Brassica carinata HOM05D004883 ORTHO05D005766 6.4e-45 184.1 119 73.1
MD08G1101600 Malus domestica HOM05D004883 ORTHO05D005766 8.4e-45 183.7 121 72.7
Prupe.1G435500 Prunus persica HOM05D004883 ORTHO05D005766 8.4e-45 183.7 119 72.3
ClCG05G019880 Citrullus lanatus HOM05D004883 ORTHO05D005766 1.9e-44 182.6 119 70.6
Carub.0008s0602 Capsella rubella HOM05D004883 ORTHO05D005766 2.4e-44 182.2 119 72.3
MD15G1083000 Malus domestica HOM05D004883 ORTHO05D005766 2.4e-44 182.2 121 71.9
AT5G42890 Arabidopsis thaliana HOM05D004883 ORTHO05D005766 3.2e-44 181.8 119 72.3
TAR381G1103 Trochodendron aralioides HOM05D004883 ORTHO05D005766 3.2e-44 181.8 122 72.1
AL8G18060 Arabidopsis lyrata HOM05D004883 ORTHO05D005766 4.2e-44 181.4 119 72.3
Ciclev10002854m.g Citrus clementina HOM05D004883 ORTHO05D005766 4.2e-44 181.4 122 68.0
AUR62012534 Chenopodium quinoa HOM05D004883 ORTHO05D005766 5.4e-44 181.0 120 70.8
THA.LOC104814168 Tarenaya hassleriana HOM05D004883 ORTHO05D005766 5.4e-44 181.0 123 70.7
HanXRQChr14g0439621 Helianthus annuus HOM05D004883 ORTHO05D005766 9.3e-44 180.3 122 69.7
Solyc04g078920.3 Solanum lycopersicum HOM05D004883 ORTHO05D005766 9.3e-44 180.3 122 70.5
ECA232G2590 Erigeron canadensis HOM05D004883 ORTHO05D005766 1.6e-43 179.5 122 68.9
PGSC0003DMG400007973 Solanum tuberosum HOM05D004883 ORTHO05D005766 1.6e-43 179.5 122 70.5
vmacro04449 Vaccinium macrocarpon HOM05D004883 ORTHO05D005766 1.6e-43 179.5 122 69.7
AUR62014661 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.1e-43 179.1 119 70.6
AUR62044174 Chenopodium quinoa HOM05D004883 ORTHO05D005766 2.1e-43 179.1 119 70.6
Rhsim07G0228400 Rhododendron simsii HOM05D004883 ORTHO05D005766 2.1e-43 179.1 122 68.9
Sopen04g032520 Solanum pennellii HOM05D004883 ORTHO05D005766 2.1e-43 179.1 122 70.5
Aa31LG9G12950 Aethionema arabicum HOM05D004883 ORTHO05D005766 2.7e-43 178.7 123 71.5
CsaV3_4G034310 Cucumis sativus L. HOM05D004883 ORTHO05D005766 2.7e-43 178.7 121 67.8
Hma1.2p1_0982F.1_g244010 Hydrangea macrophylla HOM05D004883 ORTHO05D005766 2.7e-43 178.7 122 68.9
Sc02g0007090 Simmondsia chinensis HOM05D004883 ORTHO05D005766 2.7e-43 178.7 122 69.7
Ah.09g236860 Amaranthus hybridus HOM05D004883 ORTHO05D005766 4.6e-43 177.9 119 68.9
MSTRG.1348 Avicennia marina HOM05D004883 ORTHO05D005766 4.6e-43 177.9 122 68.9
Gohir.D06G016900 Gossypium hirsutum HOM05D004883 ORTHO05D005766 4.6e-43 177.9 121 67.8
Gorai.010G019800 Gossypium raimondii HOM05D004883 ORTHO05D005766 4.6e-43 177.9 121 67.8
Actinidia38058 Actinidia chinensis HOM05D004883 ORTHO05D005766 7.9e-43 177.2 122 68.9
Duzib093G0126 Durio zibethinus HOM05D004883 ORTHO05D005766 7.9e-43 177.2 111 75.7
Hund21302 Selenicereus undatus HOM05D004883 ORTHO05D005766 7.9e-43 177.2 118 69.5
EL10Ac8g19960 Beta vulgaris HOM05D004883 ORTHO05D005766 1.3e-42 176.4 119 70.6
CARHR181250 Cardamine hirsuta HOM05D004883 ORTHO05D005766 1.8e-42 176.0 119 70.6
HanXRQChr05g0150871 Helianthus annuus HOM05D004883 ORTHO05D005766 1.8e-42 176.0 122 68.0
Sed0005554 Sechium edule HOM05D004883 ORTHO05D005766 1.8e-42 176.0 119 68.1
Lsat_1_v5_gn_4_125820 Lactuca sativa HOM05D004883 ORTHO05D005766 3.0e-42 175.3 122 68.0
Nn1g04858 Nelumbo nucifera HOM05D004883 ORTHO05D005766 3.9e-42 174.9 119 71.4
Peaxi162Scf00010g00308 Petunia axillaris HOM05D004883 ORTHO05D005766 5.1e-42 174.5 121 69.4
DCAR_020929 Daucus carota HOM05D004883 ORTHO05D005766 6.7e-42 174.1 121 66.1
Gohir.A05G202300 Gossypium hirsutum HOM05D004883 ORTHO05D005766 1.1e-41 173.3 106 77.4
Migut.C00579 Erythranthe guttata HOM05D004883 ORTHO05D005766 1.5e-41 172.9 122 66.4
Lsat_1_v5_gn_6_112040 Lactuca sativa HOM05D004883 ORTHO05D005766 1.5e-41 172.9 121 66.9
Oeu044836.1 Olea europaea HOM05D004883 ORTHO05D005766 1.5e-41 172.9 122 65.6
Eucgr.F02346 Eucalyptus grandis HOM05D004883 ORTHO05D005766 2.5e-41 172.2 153 58.2
CSS0025959 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 3.3e-41 171.8 122 66.4
CSS0031938 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 3.3e-41 171.8 122 66.4
SalBow7G2082 Salvia bowleyana HOM05D004883 ORTHO05D005766 3.3e-41 171.8 123 65.0
Oeu057282.1 Olea europaea HOM05D004883 ORTHO05D005766 4.3e-41 171.4 122 65.6
RcHm_v2.0_Chr6g0307931 Rosa chinensis HOM05D004883 ORTHO05D005766 4.3e-41 171.4 120 67.5
Aqoxy5G01236 Aquilegia oxysepala HOM05D004883 ORTHO05D005766 5.6e-41 171.0 119 71.4
FvH4_2g34441 Fragaria vesca HOM05D004883 ORTHO05D005766 5.6e-41 171.0 120 66.7
Migut.N02708 Erythranthe guttata HOM05D004883 ORTHO05D005766 7.4e-41 170.6 122 64.8
FAN20G2534 Fragaria x ananassa HOM05D004883 ORTHO05D005766 7.4e-41 170.6 120 66.7
SalBow3G1199 Salvia bowleyana HOM05D004883 ORTHO05D005766 7.4e-41 170.6 123 65.0
FAN27G2225 Fragaria x ananassa HOM05D004883 ORTHO05D005766 9.6e-41 170.2 119 66.4
Cc10_g04160 Coffea canephora HOM05D004883 ORTHO05D005766 1.6e-40 169.5 122 65.6
Os06g0211300 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 2.8e-40 168.7 121 66.1
DCAR_012777 Daucus carota HOM05D004883 ORTHO05D005766 3.7e-40 168.3 119 67.2
MELO3C016751.2 Cucumis melo HOM05D004883 ORTHO05D005766 4.8e-40 167.9 127 63.0
PSO210G0389 Papaver somniferum HOM05D004883 ORTHO05D005766 4.8e-40 167.9 119 68.9
PSO170G5588 Papaver somniferum HOM05D004883 ORTHO05D005766 6.2e-40 167.5 119 68.9
ATR1102G009 Amborella trichopoda HOM05D004883 ORTHO05D005766 8.1e-40 167.2 122 67.2
Duzib041G0234 Durio zibethinus HOM05D004883 ORTHO05D005766 3.1e-39 165.2 120 66.7
CDE08G1634 Ceratophyllum demersum HOM05D004883 ORTHO05D005766 5.3e-39 164.5 120 66.7
ECA246G2602 Erigeron canadensis HOM05D004883 ORTHO05D005766 6.9e-39 164.1 120 65.0
FvH4_2g34440 Fragaria vesca HOM05D004883 ORTHO05D005766 2.6e-38 162.2 120 65.0
SEGI_37934 Sequoiadendron giganteum HOM05D004883 ORTHO05D005766 1.3e-37 159.8 119 64.7
SMO169G0122 Selaginella moellendorffii HOM05D004883 ORTHO05D005766 8.4e-37 157.1 119 64.7
Hund23571 Selenicereus undatus HOM05D004883 ORTHO05D005766 2.4e-36 155.6 119 60.5
Pp3c24_4700 Physcomitrium patens HOM05D004883 ORTHO05D005766 1.0e-34 150.2 119 63.0
Mapoly0033s0053 Marchantia polymorpha HOM05D004883 ORTHO05D005766 2.3e-34 149.1 122 58.2
Os02g0765800 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 2.3e-34 149.1 121 59.5
Nitab4.5_0000287g0320 Nicotiana tabacum HOM05D004883 ORTHO05D005766 3.9e-34 148.3 122 62.3
Nitab4.5_0003118g0020 Nicotiana tabacum HOM05D004883 ORTHO05D005766 3.9e-34 148.3 122 62.3
CSS0006435 Camellia sinensis var. sinensis HOM05D004883 ORTHO05D005766 8.7e-34 147.1 121 59.5
CANSAT35G0766 Cannabis sativa HOM05D004883 ORTHO05D005766 1.3e-32 143.3 115 54.8
C03p39670 Brassica napus HOM05D004883 ORTHO05D005766 1.6e-32 142.9 106 67.0
MBI06_g02552_MAGBIO Magnolia biondii HOM05D004883 ORTHO05D005766 2.1e-32 142.5 120 60.8
MD00G1215600 Malus domestica HOM05D004883 ORTHO05D005766 6.9e-31 137.5 101 64.4
BcaC09g50201 Brassica carinata HOM05D004883 ORTHO05D005766 1.3e-29 133.3 111 57.7
HPP92_013338 Vanilla planifolia HOM05D004883 ORTHO05D005766 4.2e-28 128.3 121 55.4
TAR625G0321 Trochodendron aralioides HOM05D004883 ORTHO05D005766 5.5e-28 127.9 94 63.8
EL10Ac7g17187 Beta vulgaris HOM05D004883 ORTHO05D005766 5.7e-25 117.9 83 68.7
FAN15G1199 Fragaria x ananassa HOM05D004883 ORTHO05D005766 5.7e-25 117.9 83 66.3
Peaxi162Scf00252g00711 Petunia axillaris HOM05D004883 ORTHO05D005766 2.4e-23 112.5 122 50.8
AagrBONN_evm.TU.Sc2ySwM_344.1976 Anthoceros agrestis HOM05D004883 ORTHO05D005766 3.1e-23 112.1 119 46.2
BcaC01g04518 Brassica carinata HOM05D004883 ORTHO05D005766 3.1e-23 112.1 82 69.5
Actinidia29871 Actinidia chinensis HOM05D004883 ORTHO05D005766 5.3e-23 111.3 62 83.9
Nn5g30317 Nelumbo nucifera HOM05D004883 ORTHO05D005766 2.6e-22 109.0 62 85.5
Lj4A58G20 Lonicera japonica HOM05D000983 ORTHO05D005766 4.5e-22 108.2 60 83.3
CAN.G1139.16 Capsicum annuum HOM05D004883 ORTHO05D005766 8.5e-21 104.0 86 59.3
CAN.G371.3 Capsicum annuum HOM05D004883 ORTHO05D005766 2.5e-20 102.4 119 49.6
BolC9t59992H Brassica oleracea HOM05D004883 ORTHO05D005766 1.4e-18 96.7 100 52.0
EL10Ac4g09184 Beta vulgaris HOM05D004883 ORTHO05D005766 1.9e-17 92.8 114 45.6
Gohir.A06G018633 Gossypium hirsutum HOM05D004883 ORTHO05D005766 9.7e-17 90.5 94 47.9
BolC1t02723H Brassica oleracea HOM05D004883 ORTHO05D005766 2.2e-16 89.4 68 58.8
Os01g0357200 Oryza sativa ssp. japonica HOM05D004883 ORTHO05D005766 1.2e-14 83.6 85 50.6
RcHm_v2.0_Chr5g0032801 Rosa chinensis HOM05D004883 ORTHO05D005766 5.9e-14 81.3 71 59.2
PRCOL_00003255 Prasinoderma coloniale HOM05D004883 ORTHO05D005766 7.9e-11 70.9 107 36.4
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.1e-09 67.0 113 37.2
C01p27920 Brassica napus HOM05D004883 ORTHO05D005766 4.4e-09 65.1 105 41.0
unitig_32.g11126 Utricularia gibba HOM05D004883 ORTHO05D005766 4.4e-09 65.1 63 52.4
Cre14.g633550 Chlamydomonas reinhardtii HOM05D004883 ORTHO05D005766 8.2e-08 60.8 111 35.1
MELO3C033382.2 Cucumis melo HOM05D004883 ORTHO05D005766 8.2e-08 60.8 37 73.0


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