Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.7e-134 482.6 241 100.0
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.9e-117 426.0 240 86.2
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 6.1e-116 421.0 236 87.7
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.7e-114 414.5 233 86.3
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 5.7e-114 414.5 239 85.4
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 1.4e-112 409.8 234 83.8
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.8e-112 409.5 233 85.0
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 5.4e-112 407.9 241 81.7
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 2.7e-111 405.6 241 80.9
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 5.9e-111 404.4 241 80.9
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 1.0e-110 403.7 241 80.5
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.3e-110 403.3 241 80.1
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 2.9e-110 402.1 241 80.9
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 6.6e-110 401.0 230 85.7
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 6.6e-110 401.0 230 85.7
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 8.6e-110 400.6 232 84.5
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 4.3e-109 398.3 228 84.2
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 4.3e-109 398.3 231 84.0
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 5.6e-109 397.9 230 83.5
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 9.5e-109 397.1 238 79.8
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 9.5e-109 397.1 237 81.4
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.2e-108 396.7 230 83.9
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.2e-108 396.7 230 83.9
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.1e-108 396.0 253 77.1
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 2.8e-108 395.6 241 78.4
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 3.6e-108 395.2 241 80.9
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 4.7e-108 394.8 239 82.0
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 4.7e-108 394.8 241 80.9
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 4.7e-108 394.8 230 83.9
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 8.0e-108 394.0 229 82.1
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 8.0e-108 394.0 241 79.7
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.0e-107 393.7 241 80.9
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 3.0e-107 392.1 241 80.5
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.0e-107 392.1 234 82.1
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 3.0e-107 392.1 230 83.9
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 4.0e-107 391.7 221 86.9
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 6.8e-107 391.0 237 79.3
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 6.8e-107 391.0 241 79.7
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 1.2e-106 390.2 241 80.1
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.5e-106 389.8 241 79.3
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.5e-106 389.8 236 82.2
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 9.8e-106 387.1 234 80.8
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 1.3e-105 386.7 234 79.9
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 1.3e-105 386.7 234 79.9
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 6.4e-105 384.4 232 79.7
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 8.3e-105 384.0 239 77.8
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 3.2e-104 382.1 241 77.2
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 4.1e-104 381.7 241 77.2
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 4.1e-104 381.7 241 77.2
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 4.1e-104 381.7 241 75.9
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 7.0e-104 380.9 282 70.2
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.2e-103 380.2 241 76.8
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 2.7e-103 379.0 223 81.2
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 3.5e-103 378.6 241 77.6
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 3.5e-103 378.6 230 81.3
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 3.5e-103 378.6 235 80.9
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 3.5e-103 378.6 264 71.6
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.5e-103 378.6 264 73.1
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.9e-103 377.9 241 76.3
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 5.9e-103 377.9 241 76.3
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 5.9e-103 377.9 233 80.3
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 2.3e-102 375.9 254 74.0
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 3.0e-102 375.6 232 76.7
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 3.0e-102 375.6 230 77.8
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.0e-102 375.6 241 75.9
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 5.0e-102 374.8 229 78.2
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 8.6e-102 374.0 230 77.8
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.5e-101 373.2 233 79.0
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 3.3e-101 372.1 241 76.3
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 2.1e-100 369.4 229 77.3
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 8.0e-100 367.5 237 73.0
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 8.0e-100 367.5 229 76.4
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 1.0e-99 367.1 239 74.1
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 1.4e-99 366.7 233 73.4
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 3.1e-99 365.5 224 78.6
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.2e-98 363.6 238 74.4
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.3e-97 360.1 230 78.3
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 1.7e-97 359.8 240 70.8
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 1.1e-96 357.1 230 77.4
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.4e-96 354.8 261 69.3
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.0e-94 350.5 228 73.7
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.0e-94 350.5 228 73.2
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.7e-94 349.7 209 82.3
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.0e-94 349.0 228 73.2
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 3.0e-94 349.0 240 73.3
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 9.5e-93 344.0 210 82.4
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 6.8e-91 337.8 250 67.2
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.5e-90 336.7 232 72.4
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 2.2e-89 332.8 259 64.5
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 2.1e-84 316.2 211 73.0
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 2.8e-84 315.8 196 77.6
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 2.6e-82 309.3 232 68.5
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 7.6e-82 307.8 191 79.1
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 9.9e-82 307.4 243 68.3
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.2e-81 306.2 196 79.1
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 2.9e-81 305.8 231 64.1
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 3.7e-81 305.4 226 65.5
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.1e-80 302.0 268 60.8
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 2.8e-76 289.3 238 59.2
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.4e-72 276.9 295 51.5
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.4e-72 276.2 194 72.2
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 2.1e-71 273.1 166 80.1
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 3.3e-69 265.8 226 57.1
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.8e-67 260.0 225 56.9
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 1.7e-65 253.4 160 73.1
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 5.4e-64 248.4 218 60.1
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 4.3e-61 238.8 194 64.9
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 1.1e-59 234.2 229 51.5
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 3.1e-59 232.6 175 67.4
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 3.1e-59 232.6 175 67.4
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 2.0e-58 229.9 140 79.3
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 3.8e-49 199.1 123 80.5
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 4.5e-42 175.6 128 67.2
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 6.5e-41 171.8 164 56.7
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 1.3e-36 157.5 122 66.4
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 5.9e-34 148.7 92 79.3
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.8e-27 127.1 81 77.8
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 3.4e-26 122.9 88 69.3
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 6.5e-25 118.6 63 88.9
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 8.5e-25 118.2 71 76.1
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 2.3e-22 110.2 55 89.1
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 2.6e-21 106.7 103 60.2
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.6e-15 87.4 62 71.0
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.3e-13 79.7 152 33.6
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 1.0e-09 68.2 72 52.8


User provided reference genes

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