Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 2.1e-143 512.3 250 100.0
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 1.6e-103 379.8 250 74.8
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 1.0e-97 360.5 239 74.1
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.0e-97 360.5 246 70.7
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 5.1e-97 358.2 246 71.5
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 8.6e-97 357.5 235 75.7
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 5.6e-96 354.8 242 73.1
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 2.1e-95 352.8 236 73.3
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 8.9e-94 347.4 241 72.2
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 3.4e-93 345.5 230 72.6
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 4.4e-93 345.1 218 76.6
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.7e-92 343.2 245 69.4
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 4.9e-92 341.7 204 78.9
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 6.4e-92 341.3 215 76.7
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 6.4e-92 341.3 224 72.3
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 2.4e-91 339.3 263 65.4
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 3.2e-91 339.0 248 65.7
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 3.2e-91 339.0 217 73.3
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 3.5e-90 335.5 243 66.3
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 3.5e-90 335.5 212 73.1
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 3.5e-90 335.5 245 66.5
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.6e-90 335.1 208 74.5
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 4.6e-90 335.1 208 74.5
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 3.9e-89 332.0 245 66.1
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 2.5e-88 329.3 250 65.2
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 6.2e-87 324.7 219 69.9
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 6.2e-87 324.7 230 70.9
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 8.1e-87 324.3 218 70.2
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 8.1e-87 324.3 215 73.0
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 8.1e-87 324.3 226 71.2
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 1.4e-86 323.6 236 67.4
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 2.4e-86 322.8 228 68.4
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 3.1e-86 322.4 202 73.8
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 4.0e-86 322.0 204 73.5
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 4.0e-86 322.0 202 73.3
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 8.9e-86 320.9 210 71.0
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 1.2e-85 320.5 202 72.8
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 1.5e-85 320.1 250 62.4
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 2.0e-85 319.7 228 67.1
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 2.0e-85 319.7 226 66.8
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 2.6e-85 319.3 218 69.7
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 2.6e-85 319.3 247 62.8
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 3.4e-85 318.9 216 69.9
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 4.4e-85 318.5 204 72.1
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 7.6e-85 317.8 242 66.1
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 1.7e-84 316.6 218 67.9
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 2.9e-84 315.8 229 66.8
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 1.1e-83 313.9 201 72.6
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 1.4e-83 313.5 231 65.4
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 1.9e-83 313.2 249 62.2
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.9e-83 313.2 215 66.5
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 2.4e-83 312.8 246 63.0
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 7.1e-83 311.2 220 67.3
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 3.9e-81 305.4 208 69.7
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 8.7e-81 304.3 204 71.6
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.1e-80 303.9 211 69.2
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 1.5e-80 303.5 263 58.6
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.9e-80 303.1 199 71.9
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 2.5e-80 302.8 233 64.4
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 7.3e-80 301.2 207 67.6
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 7.3e-80 301.2 216 66.7
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.8e-78 296.6 214 65.0
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.8e-78 296.6 193 72.0
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 2.6e-77 292.7 182 75.3
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 3.8e-76 288.9 198 71.2
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 3.8e-76 288.9 195 70.3
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 3.2e-75 285.8 195 70.8
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 2.3e-73 279.6 225 64.0
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 3.9e-73 278.9 218 66.1
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 1.3e-71 273.9 209 64.1
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 3.1e-70 269.2 246 52.8
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 1.5e-64 250.4 197 61.4
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 9.0e-62 241.1 199 57.3
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 4.9e-60 235.3 171 68.4
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 7.1e-59 231.5 193 57.0
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 3.5e-58 229.2 197 54.8
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 1.5e-56 223.8 164 64.0
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.3e-55 220.7 171 66.7
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 1.4e-54 217.2 216 52.3
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 5.3e-54 215.3 192 54.2
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.9e-52 209.5 132 76.5
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 8.5e-52 208.0 149 65.8
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 3.2e-51 206.1 251 45.4
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 6.9e-46 188.3 194 51.0
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 1.6e-42 177.2 95 81.1
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 7.4e-40 168.3 121 70.2
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 6.9e-38 161.8 109 74.3
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 2.9e-36 156.4 172 51.7
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.8e-33 147.1 133 56.4
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 3.3e-32 142.9 86 77.9
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 1.2e-29 134.4 96 65.6
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 2.6e-29 133.3 98 67.3
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 1.2e-26 124.4 210 37.1
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 2.0e-16 90.5 70 61.4
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 3.5e-13 79.7 113 40.7


User provided reference genes

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