Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 3.2e-72 275.0 142 100.0
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 5.0e-41 171.4 141 66.7
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 5.0e-41 171.4 141 66.7
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 6.5e-41 171.0 144 67.4
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 8.5e-41 170.6 143 67.8
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 7.2e-40 167.5 140 66.4
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 2.1e-39 166.0 144 64.6
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.4e-38 163.3 144 66.7
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 5.2e-38 161.4 143 67.8
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 8.8e-38 160.6 146 63.7
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 2.6e-37 159.1 140 63.6
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 5.7e-37 157.9 144 60.4
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 5.7e-37 157.9 144 60.4
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 6.3e-36 154.5 143 65.7
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 8.2e-36 154.1 145 63.4
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 1.3e-33 146.7 143 60.8
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 2.5e-32 142.5 144 56.2
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 3.2e-32 142.1 144 59.0
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 9.4e-32 140.6 135 58.5
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 1.2e-31 140.2 143 58.7
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 2.1e-31 139.4 143 58.7
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 2.7e-31 139.0 146 58.9
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 6.1e-31 137.9 146 54.8
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 1.8e-30 136.3 144 55.6
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 2.3e-30 136.0 147 54.4
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 2.3e-30 136.0 145 58.6
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 6.7e-30 134.4 149 56.4
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 8.8e-30 134.0 141 55.3
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 8.8e-30 134.0 144 52.8
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 1.5e-29 133.3 144 54.2
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 2.6e-29 132.5 139 56.8
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 3.3e-29 132.1 140 56.4
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 5.7e-29 131.3 139 56.1
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 5.7e-29 131.3 141 53.2
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 9.7e-29 130.6 147 53.1
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 1.3e-28 130.2 144 54.2
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 1.3e-28 130.2 146 54.1
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 1.7e-28 129.8 144 52.8
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 2.8e-28 129.0 148 57.4
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 4.8e-28 128.3 145 52.4
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 6.3e-28 127.9 143 53.1
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 6.3e-28 127.9 141 54.6
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 6.3e-28 127.9 144 56.9
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 1.1e-27 127.1 146 54.8
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 1.4e-27 126.7 143 53.8
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.4e-27 126.7 141 53.2
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 1.4e-27 126.7 144 55.6
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 1.8e-27 126.3 145 50.3
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 4.1e-27 125.2 150 50.7
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 4.1e-27 125.2 147 53.1
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 5.3e-27 124.8 148 50.0
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 5.3e-27 124.8 141 53.2
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 9.1e-27 124.0 142 51.4
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 9.1e-27 124.0 143 53.1
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 9.1e-27 124.0 143 50.3
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.2e-26 123.6 141 52.5
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 1.2e-26 123.6 143 52.4
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 3.5e-26 122.1 122 64.8
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 4.5e-26 121.7 101 62.4
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 5.9e-26 121.3 143 55.9
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 7.7e-26 120.9 143 53.1
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 7.7e-26 120.9 146 50.7
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 1.0e-25 120.6 150 51.3
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 1.0e-25 120.6 144 54.2
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 1.3e-25 120.2 144 52.8
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 1.3e-25 120.2 144 52.8
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 1.7e-25 119.8 146 49.3
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 2.9e-25 119.0 90 65.6
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 2.9e-25 119.0 143 50.3
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 3.8e-25 118.6 78 69.2
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 3.8e-25 118.6 143 50.3
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 3.8e-25 118.6 151 51.0
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 6.5e-25 117.9 133 50.4
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 8.5e-25 117.5 141 50.4
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 8.5e-25 117.5 140 50.7
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 1.1e-24 117.1 141 53.2
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 1.1e-24 117.1 146 50.0
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 1.9e-24 116.3 146 47.9
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 2.5e-24 115.9 141 51.8
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 2.5e-24 115.9 141 51.8
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 2.5e-24 115.9 146 49.3
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 2.5e-24 115.9 87 66.7
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 3.2e-24 115.5 140 49.3
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 4.2e-24 115.2 143 48.3
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 5.5e-24 114.8 125 51.2
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 9.4e-24 114.0 145 53.8
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 1.2e-23 113.6 169 48.5
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 2.7e-23 112.5 74 71.6
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 6.1e-23 111.3 149 49.7
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 1.0e-22 110.5 163 44.8
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 3.0e-22 109.0 137 46.7
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 3.0e-22 109.0 81 63.0
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 6.8e-22 107.8 138 47.8
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 1.5e-21 106.7 140 47.9
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 2.0e-21 106.3 144 50.7
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 2.6e-21 105.9 97 59.8
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 5.7e-21 104.8 148 48.0
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 2.2e-20 102.8 145 48.3
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 2.2e-20 102.8 84 60.7
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 2.8e-20 102.4 140 46.4
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 3.7e-20 102.1 138 47.1
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 3.7e-20 102.1 99 53.5
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 6.3e-20 101.3 144 48.6
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 6.3e-20 101.3 119 55.5
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 8.3e-20 100.9 85 55.3
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 8.3e-20 100.9 85 55.3
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 1.8e-19 99.8 79 60.8
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 7.0e-19 97.8 79 59.5
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 7.0e-19 97.8 81 59.3
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 7.7e-18 94.4 89 56.2
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 1.0e-17 94.0 77 58.4
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 8.6e-17 90.9 91 54.9
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 1.9e-16 89.7 143 42.0
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 3.6e-15 85.5 120 51.7
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 4.0e-14 82.0 69 55.1
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 1.2e-13 80.5 85 54.1
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 9.8e-13 77.4 78 52.6
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 2.8e-12 75.9 123 43.9
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 3.7e-12 75.5 87 43.7
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 1.4e-11 73.6 83 45.8
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 2.4e-11 72.8 79 45.6
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 4.1e-11 72.0 126 43.7
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 4.1e-11 72.0 122 41.8
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 2.0e-10 69.7 133 33.1
BolC2t11399H Brassica oleracea HOM05D006427 ORTHO05D008147 1.7e-09 66.6 91 48.4
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 9.5e-08 60.8 117 35.9
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 1.2e-07 60.5 119 39.5


User provided reference genes

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