Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.04G022200 Manihot esculenta HOM05D005643 ORTHO05D006819 2.9e-140 501.9 252 100.0
Sabra09G0008500 Salix brachista HOM05D005643 ORTHO05D006819 5.1e-121 438.0 252 86.5
Potri.009G012700 Populus trichocarpa HOM05D005643 ORTHO05D006819 4.7e-119 431.4 253 86.2
TWI75G1433 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 8.4e-116 420.6 252 82.9
TWI79G0673 Tripterygium wilfordii HOM05D005643 ORTHO05D006819 1.4e-115 419.9 253 83.4
Ciclev10029093m.g Citrus clementina HOM05D005643 ORTHO05D006819 2.7e-114 415.6 260 80.8
Thecc.09G257100 Theobroma cacao HOM05D005643 ORTHO05D006819 1.3e-113 413.3 251 81.3
Atru.chr3.3643 Acer truncatum HOM05D005643 ORTHO05D006819 3.3e-112 408.7 254 80.7
Gohir.D05G076900 Gossypium hirsutum HOM05D005643 ORTHO05D006819 3.6e-111 405.2 251 79.7
Lalb_Chr19g0124481 Lupinus albus HOM05D005643 ORTHO05D006819 3.6e-111 405.2 250 78.0
Gohir.A05G074000 Gossypium hirsutum HOM05D005643 ORTHO05D006819 4.7e-111 404.8 251 79.7
THA.LOC104814830 Tarenaya hassleriana HOM05D005643 ORTHO05D006819 4.7e-111 404.8 255 79.2
AT5G60540 Arabidopsis thaliana HOM05D005643 ORTHO05D006819 8.1e-111 404.1 256 79.3
Gorai.009G078300 Gossypium raimondii HOM05D005643 ORTHO05D006819 1.1e-110 403.7 251 79.3
Carub.0008s2123 Capsella rubella HOM05D005643 ORTHO05D006819 6.9e-110 401.0 256 78.9
Prupe.6G100100 Prunus persica HOM05D005643 ORTHO05D006819 6.9e-110 401.0 250 79.2
AL8G37130 Arabidopsis lyrata HOM05D005643 ORTHO05D006819 1.2e-109 400.2 256 78.1
A10p17720 Brassica napus HOM05D005643 ORTHO05D006819 1.5e-109 399.8 256 79.3
BraA10t43851Z Brassica rapa HOM05D005643 ORTHO05D006819 1.5e-109 399.8 256 79.3
Dinv32759 Davidia involucrata HOM05D005643 ORTHO05D006819 1.5e-109 399.8 252 78.6
QL01p022418 Quercus lobata HOM05D005643 ORTHO05D006819 2.6e-109 399.1 249 79.5
BcaB08g36348 Brassica carinata HOM05D005643 ORTHO05D006819 3.4e-109 398.7 256 78.5
Cfa011331 Carpinus fangiana HOM05D005643 ORTHO05D006819 5.8e-109 397.9 251 79.3
TPR.G13337 Trifolium pratense HOM05D005643 ORTHO05D006819 7.6e-109 397.5 250 78.8
CARHR274200 Cardamine hirsuta HOM05D005643 ORTHO05D006819 9.9e-109 397.1 256 77.7
Sp6g22110 Schrenkiella parvula HOM05D005643 ORTHO05D006819 9.9e-109 397.1 256 79.3
BolC9t58193H Brassica oleracea HOM05D005643 ORTHO05D006819 1.3e-108 396.7 256 78.5
C09p53180 Brassica napus HOM05D005643 ORTHO05D006819 3.8e-108 395.2 256 78.1
Duzib170G0435 Durio zibethinus HOM05D005643 ORTHO05D006819 6.4e-108 394.4 249 78.7
Duzib170G0739 Durio zibethinus HOM05D005643 ORTHO05D006819 6.4e-108 394.4 249 78.7
Aa31LG1G12530 Aethionema arabicum HOM05D005643 ORTHO05D006819 1.9e-107 392.9 255 78.0
arahy.Tifrunner.gnm1.ann1.X5NJ7E Arachis hypogaea HOM05D005643 ORTHO05D006819 1.9e-107 392.9 252 77.0
Duzib150G0959 Durio zibethinus HOM05D005643 ORTHO05D006819 2.4e-107 392.5 251 78.1
FvH4_3g32570 Fragaria vesca HOM05D005643 ORTHO05D006819 2.4e-107 392.5 248 77.4
Medtr4g015590 Medicago truncatula HOM05D005643 ORTHO05D006819 5.4e-107 391.3 250 77.6
BolC2t07247H Brassica oleracea HOM05D005643 ORTHO05D006819 9.3e-107 390.6 255 77.6
Phvul.010G001900 Phaseolus vulgaris HOM05D005643 ORTHO05D006819 9.3e-107 390.6 251 78.1
GSVIVG01025172001 Vitis vinifera HOM05D005643 ORTHO05D006819 1.6e-106 389.8 253 79.1
FAN11G2689 Fragaria x ananassa HOM05D005643 ORTHO05D006819 4.6e-106 388.3 253 75.9
Glyma.03G060100 Glycine max HOM05D005643 ORTHO05D006819 1.0e-105 387.1 252 77.4
CiPaw.13G111900 Carya illinoinensis HOM05D005643 ORTHO05D006819 3.0e-105 385.6 251 79.3
Glyma.01G116100 Glycine max HOM05D005643 ORTHO05D006819 3.9e-105 385.2 256 76.2
Oeu059095.1 Olea europaea HOM05D005643 ORTHO05D006819 3.9e-105 385.2 252 75.4
Eucgr.B02489 Eucalyptus grandis HOM05D005643 ORTHO05D006819 5.1e-105 384.8 253 76.7
Lalb_Chr03g0043331 Lupinus albus HOM05D005643 ORTHO05D006819 5.1e-105 384.8 237 76.4
TAR633G1751 Trochodendron aralioides HOM05D005643 ORTHO05D006819 6.6e-105 384.4 253 76.3
Psat7g245880 Pisum sativum HOM05D005643 ORTHO05D006819 1.5e-104 383.3 253 77.5
MSTRG.21131 Avicennia marina HOM05D005643 ORTHO05D006819 1.9e-104 382.9 251 76.1
CAN.G1001.26 Capsicum annuum HOM05D005643 ORTHO05D006819 3.3e-104 382.1 252 74.6
Nitab4.5_0006757g0010 Nicotiana tabacum HOM05D005643 ORTHO05D006819 1.6e-103 379.8 252 73.8
Lj3g0018588 Lotus japonicus HOM05D005643 ORTHO05D006819 4.8e-103 378.3 249 73.1
Migut.D02214 Erythranthe guttata HOM05D005643 ORTHO05D006819 2.4e-102 375.9 251 75.7
FAN21G1883 Fragaria x ananassa HOM05D005643 ORTHO05D006819 2.4e-102 375.9 266 71.4
Rhsim13G0093700 Rhododendron simsii HOM05D005643 ORTHO05D006819 2.4e-102 375.9 252 75.4
Migut.D02210 Erythranthe guttata HOM05D005643 ORTHO05D006819 6.9e-102 374.4 251 75.3
Cc01_g11250 Coffea canephora HOM05D005643 ORTHO05D006819 9.0e-102 374.0 252 73.4
FAN16G3648 Fragaria x ananassa HOM05D005643 ORTHO05D006819 9.0e-102 374.0 253 73.9
PGR102G1730 Punica granatum HOM05D005643 ORTHO05D006819 9.0e-102 374.0 253 75.1
Sed0015117 Sechium edule HOM05D005643 ORTHO05D006819 9.0e-102 374.0 248 74.6
SalBow5G2340 Salvia bowleyana HOM05D005643 ORTHO05D006819 1.2e-101 373.6 251 73.7
arahy.Tifrunner.gnm1.ann1.9U2L6D Arachis hypogaea HOM05D005643 ORTHO05D006819 3.4e-101 372.1 250 74.4
PSO384G4957 Papaver somniferum HOM05D005643 ORTHO05D006819 5.8e-101 371.3 254 73.2
RcHm_v2.0_Chr5g0059641 Rosa chinensis HOM05D005643 ORTHO05D006819 5.8e-101 371.3 262 71.4
Peaxi162Scf00270g00108 Petunia axillaris HOM05D005643 ORTHO05D006819 7.6e-101 370.9 252 73.8
PSO339G3071 Papaver somniferum HOM05D005643 ORTHO05D006819 1.3e-100 370.2 254 72.8
MELO3C025766.2 Cucumis melo HOM05D005643 ORTHO05D006819 1.7e-100 369.8 248 75.0
Lj1A190T89 Lonicera japonica HOM05D005643 ORTHO05D006819 1.7e-100 369.8 254 74.0
Nn2g10757 Nelumbo nucifera HOM05D005643 ORTHO05D006819 3.8e-100 368.6 253 73.1
MD11G1133800 Malus domestica HOM05D005643 ORTHO05D006819 6.4e-100 367.9 268 70.9
SGA_v2.0_scaffold97G29210 Striga asiatica HOM05D005643 ORTHO05D006819 6.4e-100 367.9 251 72.1
Thhalv10014160m.g Eutrema salsugineum HOM05D005643 ORTHO05D006819 2.4e-99 365.9 251 74.5
Aqoxy1G03172 Aquilegia oxysepala HOM05D005643 ORTHO05D006819 5.4e-99 364.8 250 72.8
Solyc11g069290.2 Solanum lycopersicum HOM05D005643 ORTHO05D006819 5.4e-99 364.8 252 70.6
Sopen11g028020 Solanum pennellii HOM05D005643 ORTHO05D006819 5.4e-99 364.8 252 70.6
PGSC0003DMG400008060 Solanum tuberosum HOM05D005643 ORTHO05D006819 7.1e-99 364.4 252 70.2
arahy.Tifrunner.gnm1.ann1.QSC7KM Arachis hypogaea HOM05D005643 ORTHO05D006819 1.2e-98 363.6 302 64.2
Sc06g0010070 Simmondsia chinensis HOM05D005643 ORTHO05D006819 1.6e-98 363.2 252 72.6
VMungo0331G1810 Vigna mungo HOM05D005643 ORTHO05D006819 2.7e-98 362.5 238 75.6
Nitab4.5_0000650g0110 Nicotiana tabacum HOM05D005643 ORTHO05D006819 7.9e-98 360.9 275 66.9
CAN.G631.16 Capsicum annuum HOM05D005643 ORTHO05D006819 1.8e-97 359.8 252 71.8
ATR0115G033 Amborella trichopoda HOM05D005643 ORTHO05D006819 3.0e-97 359.0 253 71.1
CsaV3_6G013840 Cucumis sativus L. HOM05D005643 ORTHO05D006819 3.0e-97 359.0 248 73.4
DCAR_006056 Daucus carota HOM05D005643 ORTHO05D006819 6.7e-97 357.8 255 72.5
BcaB08g36349 Brassica carinata HOM05D005643 ORTHO05D006819 3.3e-96 355.5 232 77.2
HanXRQChr01g0018371 Helianthus annuus HOM05D005643 ORTHO05D006819 6.2e-95 351.3 258 69.4
ECA248G1947 Erigeron canadensis HOM05D005643 ORTHO05D006819 8.1e-95 350.9 257 68.9
EL10Ac9g22501 Beta vulgaris HOM05D005643 ORTHO05D006819 3.1e-94 349.0 262 67.9
AUR62039626 Chenopodium quinoa HOM05D005643 ORTHO05D006819 2.6e-93 345.9 260 68.5
unitig_0.g1517 Utricularia gibba HOM05D005643 ORTHO05D006819 3.4e-93 345.5 250 69.6
AUR62024993 Chenopodium quinoa HOM05D005643 ORTHO05D006819 9.9e-93 344.0 260 67.3
Hma1.2p1_1030F.1_g249820 Hydrangea macrophylla HOM05D005643 ORTHO05D006819 6.4e-92 341.3 236 72.5
MBI07_g41453_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 6.4e-92 341.3 237 71.7
Os02g0130100 Oryza sativa ssp. japonica HOM05D005643 ORTHO05D006819 1.9e-88 329.7 253 64.4
MD03G1113000 Malus domestica HOM05D005643 ORTHO05D006819 7.4e-88 327.8 240 70.4
HPP92_025849 Vanilla planifolia HOM05D005643 ORTHO05D006819 7.4e-88 327.8 251 62.5
SEGI_15740 Sequoiadendron giganteum HOM05D005643 ORTHO05D006819 1.8e-86 323.2 254 62.6
AagrBONN_evm.TU.Sc2ySwM_117.2790 Anthoceros agrestis HOM05D005643 ORTHO05D006819 6.9e-86 321.2 252 64.3
Lsat_1_v5_gn_1_65480 Lactuca sativa HOM05D005643 ORTHO05D006819 9.0e-86 320.9 256 65.2
C02p11600 Brassica napus HOM05D005643 ORTHO05D006819 9.3e-83 310.8 205 76.1
Pp3c19_5510 Physcomitrium patens HOM05D005643 ORTHO05D006819 7.4e-80 301.2 228 67.5
Actinidia03737 Actinidia chinensis HOM05D005643 ORTHO05D006819 9.7e-80 300.8 203 73.9
Actinidia24093 Actinidia chinensis HOM05D005643 ORTHO05D006819 1.1e-78 297.4 201 73.6
CSS0039600 Camellia sinensis var. sinensis HOM05D005643 ORTHO05D006819 1.1e-78 297.4 256 61.7
Mapoly0081s0077 Marchantia polymorpha HOM05D005643 ORTHO05D006819 2.0e-77 293.1 241 63.1
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 2.0e-77 293.1 199 74.9
SMO364G0700 Selaginella moellendorffii HOM05D005643 ORTHO05D006819 5.9e-77 291.6 255 59.2
Pp3c18_20140 Physcomitrium patens HOM05D005643 ORTHO05D006819 2.2e-76 289.7 226 64.6
arahy.Tifrunner.gnm1.ann1.J7FTHV Arachis hypogaea HOM05D005643 ORTHO05D006819 6.5e-76 288.1 235 65.1
Ca_09130_v3 Cicer arietinum L. HOM05D005643 ORTHO05D006819 9.7e-72 274.2 183 73.8
Zm00001eb208970 Zea mays HOM05D005643 ORTHO05D006819 1.4e-70 270.4 160 80.0
Oeu002854.1 Olea europaea HOM05D005643 ORTHO05D006819 3.8e-68 262.3 192 67.7
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 3.6e-66 255.8 179 72.1
BcaC04g19711 Brassica carinata HOM05D005643 ORTHO05D006819 1.0e-65 254.2 256 58.2
vmacro03191 Vaccinium macrocarpon HOM05D005643 ORTHO05D006819 6.7e-65 251.5 249 55.0
CBR_g31179 Chara braunii HOM05D005643 ORTHO05D006819 8.8e-65 251.1 241 55.2
MBI07_g42630_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 2.4e-62 243.0 218 59.2
Cre03.g167051 Chlamydomonas reinhardtii HOM05D005643 ORTHO05D006819 7.0e-62 241.5 253 52.2
BcaC03g13961 Brassica carinata HOM05D005643 ORTHO05D006819 1.2e-58 230.7 131 84.7
MCO05G014 Micromonas commoda HOM05D005643 ORTHO05D006819 9.7e-56 221.1 222 53.2
Lj2A1030T57 Lonicera japonica HOM05D005643 ORTHO05D006819 5.0e-52 208.8 115 86.1
Haze_23864 Corylus avellana HOM05D005643 ORTHO05D006819 1.2e-48 197.6 140 73.6
TAR636G3455 Trochodendron aralioides HOM05D005643 ORTHO05D006819 2.0e-45 186.8 101 84.2
CiPaw.13G111500 Carya illinoinensis HOM05D005643 ORTHO05D006819 1.7e-44 183.7 140 71.4
Cfa022863 Carpinus fangiana HOM05D005643 ORTHO05D006819 4.7e-42 175.6 267 40.8
Oeu002855.1 Olea europaea HOM05D005643 ORTHO05D006819 8.0e-42 174.9 147 60.5
SHI06096 Sapria himalayana HOM05D005643 ORTHO05D006819 9.2e-30 134.8 138 50.7
BraA02t05718Z Brassica rapa HOM05D005643 ORTHO05D006819 3.5e-29 132.9 67 89.6
Rhsim06G0101300 Rhododendron simsii HOM05D005643 ORTHO05D006819 1.6e-26 124.0 93 65.6
Cpa.g.sc216.17 Carica papaya HOM05D005643 ORTHO05D006819 2.2e-23 113.6 57 86.0
Dinv12496 Davidia involucrata HOM05D005643 ORTHO05D006819 3.7e-23 112.8 75 74.7
SHI06095 Sapria himalayana HOM05D005643 ORTHO05D006819 2.3e-20 103.6 72 65.3
Cpa.g.sc216.18 Carica papaya HOM05D005643 ORTHO05D006819 6.6e-20 102.1 76 71.1
ClCG02G021090 Citrullus lanatus HOM05D005643 ORTHO05D006819 6.8e-17 92.0 72 70.8
Lj2A1030T58 Lonicera japonica HOM05D005643 ORTHO05D006819 1.5e-16 90.9 69 63.8
TAR636G0837 Trochodendron aralioides HOM05D005643 ORTHO05D006819 1.3e-15 87.8 76 61.8
SHI06094 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-09 68.2 60 61.7
Rhsim13G0093600 Rhododendron simsii HOM05D000699 ORTHO05D000519 5.2e-09 65.9 43 76.7
TAR005G0002 Trochodendron aralioides HOM05D005643 ORTHO05D006819 5.2e-09 65.9 66 56.1
PRCOL_00006457 Prasinoderma coloniale HOM05D005643 ORTHO05D006819 8.3e-07 58.5 144 34.0
MBI07_g43742_MAGBIO Magnolia biondii HOM05D005643 ORTHO05D006819 1.4e-06 57.8 77 51.9


User provided reference genes

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