Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 0.0e+00 1229.9 618 100.0
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 6.9e-289 996.9 613 79.4
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 1.1e-286 989.6 606 78.4
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 2.7e-285 984.9 614 78.3
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 4.6e-285 984.2 608 78.5
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 7.9e-285 983.4 609 78.3
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.0e-284 983.0 608 78.5
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 6.7e-284 980.3 608 79.1
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 1.1e-283 979.5 605 79.3
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 2.0e-283 978.8 608 77.3
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 8.2e-282 973.4 605 78.8
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.5e-280 969.1 608 77.1
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 2.0e-280 968.8 608 77.0
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 1.0e-279 966.5 608 77.8
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.7e-279 965.7 608 77.0
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 5.2e-276 954.1 608 77.0
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.5e-270 936.0 587 78.2
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 4.2e-270 934.5 608 74.0
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 9.4e-270 933.3 611 74.1
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 2.1e-269 932.2 608 74.0
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 4.0e-268 927.9 608 75.3
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 3.7e-266 921.4 573 76.4
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.4e-265 919.5 608 75.2
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 1.8e-265 919.1 606 74.6
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 1.8e-265 919.1 608 74.2
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.6e-264 916.0 608 73.2
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.0e-263 913.3 592 74.0
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 8.5e-263 910.2 614 73.8
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 4.2e-262 907.9 614 73.8
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.3e-260 902.1 614 73.3
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 8.8e-260 900.2 611 72.0
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.0e-259 899.0 614 73.3
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 4.4e-259 897.9 617 71.0
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 9.8e-259 896.7 614 72.8
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 1.8e-257 892.5 608 71.5
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 2.4e-257 892.1 608 71.7
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 2.4e-257 892.1 608 71.5
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 9.1e-257 890.2 596 73.0
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 2.0e-256 889.0 608 70.7
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 3.5e-256 888.3 608 71.1
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 5.9e-256 887.5 609 71.3
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 7.7e-256 887.1 608 71.9
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 3.8e-255 884.8 610 71.0
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 6.5e-255 884.0 608 72.4
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 1.9e-254 882.5 634 69.6
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 3.2e-254 881.7 608 70.4
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 3.2e-254 881.7 609 70.9
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 9.5e-254 880.2 608 70.1
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 2.1e-253 879.0 609 71.3
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.8e-253 878.6 609 70.3
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 6.1e-253 877.5 608 71.1
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 4.0e-252 874.8 616 71.4
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 2.6e-251 872.1 609 71.1
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 9.8e-251 870.2 607 70.7
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 4.9e-250 867.8 608 69.4
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 5.4e-249 864.4 608 69.6
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 3.5e-248 861.7 608 68.4
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 5.0e-247 857.8 644 68.3
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 8.6e-247 857.1 608 69.1
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 7.3e-246 854.0 608 69.2
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 1.6e-245 852.8 606 67.7
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 6.1e-245 850.9 609 69.5
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 4.0e-244 848.2 608 68.4
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.6e-243 845.5 572 71.2
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 7.5e-243 844.0 586 70.0
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 9.8e-243 843.6 606 67.2
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.3e-242 843.2 611 69.1
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 3.7e-242 841.6 610 67.5
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 3.2e-241 838.6 611 68.9
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.0e-239 833.6 609 69.0
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 5.0e-239 831.2 611 67.3
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 8.6e-239 830.5 587 70.7
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.9e-238 829.3 592 68.6
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 2.5e-238 828.9 611 68.1
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.2e-237 826.6 615 66.5
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 2.9e-234 815.5 617 66.5
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 9.2e-233 810.4 616 65.6
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 3.5e-232 808.5 613 65.9
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 7.8e-232 807.4 608 66.4
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 5.6e-230 801.2 614 65.3
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 2.8e-229 798.9 614 65.3
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 2.8e-229 798.9 609 64.9
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 3.6e-229 798.5 590 66.8
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 4.9e-226 788.1 616 64.6
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 4.9e-226 788.1 616 64.6
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 1.9e-225 786.2 605 65.8
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.5e-214 750.0 608 60.5
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 2.8e-213 745.7 547 67.6
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 2.2e-202 709.5 583 61.1
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 7.1e-201 704.5 609 58.8
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 9.6e-198 694.1 476 72.7
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.2e-195 687.2 432 78.5
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.1e-188 664.1 493 66.7
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 2.2e-178 629.8 398 75.6
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 1.1e-177 627.5 614 51.6
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 5.5e-177 625.2 416 72.6
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 1.4e-169 600.5 430 69.5
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 8.8e-167 591.3 628 49.7
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.6e-155 553.1 418 67.2
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 3.6e-152 542.7 613 46.3
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.8e-149 533.1 399 66.4
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.0e-146 524.6 613 47.1
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 3.4e-134 483.0 607 46.3
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 1.3e-130 471.1 441 60.3
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.2e-107 394.8 274 73.0
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 4.4e-102 376.3 756 33.6
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 7.7e-54 216.1 182 58.8
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 2.4e-47 194.5 164 61.6
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 2.5e-44 184.5 174 52.3
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 3.6e-43 180.6 214 45.3
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 9.1e-31 139.4 130 54.6
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 2.0e-22 111.7 221 37.1
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.5e-20 105.5 60 81.7
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.6e-19 100.9 90 56.7
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 4.0e-10 70.9 40 75.0
COL.COLO4_22600 Corchorus olitorius HOM05D002762 ORTHO05D155964 1.4e-07 62.4 54 57.4
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 5.4e-07 60.5 64 56.2


User provided reference genes

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