Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 1.2e-127 459.9 237 100.0
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 7.0e-56 221.5 218 56.4
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 3.5e-55 219.2 220 54.1
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 7.7e-55 218.0 221 56.1
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 2.2e-49 199.9 208 54.3
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 7.0e-48 194.9 231 49.4
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 2.3e-46 189.9 219 47.5
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 6.6e-46 188.3 234 47.4
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 1.9e-45 186.8 209 51.2
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 3.3e-45 186.0 234 46.2
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.3e-45 186.0 219 46.1
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 2.8e-44 183.0 232 45.3
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 2.8e-44 183.0 232 45.3
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 2.3e-43 179.9 226 45.6
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 4.0e-43 179.1 225 46.2
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 6.8e-43 178.3 225 45.8
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 5.8e-42 175.3 228 46.5
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 1.7e-41 173.7 223 47.1
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 1.7e-41 173.7 231 46.8
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 6.4e-41 171.8 216 46.8
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 8.3e-41 171.4 238 44.5
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 1.4e-40 170.6 222 44.1
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.4e-40 170.6 221 43.9
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 1.4e-40 170.6 232 46.6
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 4.1e-40 169.1 207 51.2
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 2.7e-39 166.4 249 42.2
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 2.7e-39 166.4 213 44.1
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 6.0e-39 165.2 228 45.2
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 7.8e-39 164.9 169 51.5
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 3.9e-38 162.5 228 46.1
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 3.3e-37 159.5 226 46.0
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 7.3e-37 158.3 233 45.1
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 3.6e-36 156.0 227 43.2
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 4.7e-36 155.6 233 40.8
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 4.7e-36 155.6 229 42.8
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.7e-36 155.6 227 43.2
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 8.0e-36 154.8 178 47.8
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 1.2e-34 151.0 239 37.7
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 1.5e-34 150.6 209 42.1
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 3.4e-34 149.4 257 37.7
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 5.8e-34 148.7 207 42.0
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.3e-33 147.5 229 44.5
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 1.3e-33 147.5 225 41.3
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 1.3e-33 147.5 179 48.6
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 2.9e-33 146.4 204 46.6
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 2.9e-33 146.4 206 41.7
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 3.7e-33 146.0 176 48.3
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 4.9e-33 145.6 241 39.4
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 6.4e-33 145.2 251 37.8
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.4e-32 144.1 227 40.5
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 1.9e-32 143.7 238 37.8
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 4.1e-32 142.5 237 40.1
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 4.1e-32 142.5 236 39.0
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 7.1e-32 141.7 242 38.0
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 1.2e-31 141.0 238 37.4
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.3e-30 137.5 211 41.2
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 3.0e-30 136.3 199 42.7
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 3.9e-30 136.0 240 37.5
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 3.9e-30 136.0 233 38.6
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 8.6e-30 134.8 219 37.9
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 8.6e-30 134.8 219 37.9
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 1.1e-29 134.4 220 38.6
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 1.5e-29 134.0 232 38.8
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 1.5e-29 134.0 144 53.5
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 2.5e-29 133.3 233 36.9
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 3.3e-29 132.9 202 38.6
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 3.3e-29 132.9 199 42.2
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 4.3e-29 132.5 234 36.8
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 2.1e-28 130.2 230 39.6
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 4.7e-28 129.0 245 38.0
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 6.2e-28 128.6 245 35.9
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 1.4e-27 127.5 241 34.9
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.8e-27 127.1 222 37.8
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 2.3e-27 126.7 241 36.9
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 4.0e-27 125.9 257 35.0
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.5e-26 124.0 222 34.7
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 3.4e-26 122.9 238 35.3
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 9.9e-26 121.3 202 37.1
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 1.3e-25 120.9 202 40.6
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 1.7e-25 120.6 244 34.8
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 2.2e-25 120.2 158 44.9
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 4.9e-25 119.0 186 41.9
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 8.3e-25 118.2 266 33.8
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 1.4e-24 117.5 202 36.1
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 1.4e-24 117.5 202 36.1
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 1.4e-24 117.5 202 36.1
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 3.2e-24 116.3 219 36.5
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 3.5e-23 112.8 183 36.6
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 6.0e-23 112.1 221 35.3
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 1.7e-22 110.5 234 34.6
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 4.3e-21 105.9 218 33.5
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 5.6e-21 105.5 204 34.3
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 5.6e-21 105.5 116 48.3
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 9.6e-21 104.8 230 34.8
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 6.8e-19 98.6 152 41.4
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 5.8e-18 95.5 125 40.8
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 9.9e-18 94.7 214 36.0
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 3.8e-17 92.8 109 51.4
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.1e-16 91.3 217 29.0
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 7.1e-16 88.6 223 31.4
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 6.0e-15 85.5 159 36.5
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 1.6e-12 77.4 230 29.1
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 2.4e-11 73.6 112 40.2
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.6e-10 70.1 202 30.2
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 9.9e-10 68.2 179 30.7
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.1e-08 64.7 203 28.1
Zm00001eb370010 Zea mays HOM05D007216 ORTHO05D049898 5.1e-06 55.8 258 25.6


User provided reference genes

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