Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.03G164300 Manihot esculenta HOM05D004104 ORTHO05D004755 5.0e-73 277.7 145 100.0
Haze_11377 Corylus avellana HOM05D004104 ORTHO05D004755 5.6e-48 194.5 140 74.3
Dinv27050 Davidia involucrata HOM05D004104 ORTHO05D004755 5.6e-48 194.5 141 72.3
CiPaw.01G185000 Carya illinoinensis HOM05D004104 ORTHO05D004755 7.3e-48 194.1 140 72.1
GSVIVG01027809001 Vitis vinifera HOM05D004104 ORTHO05D004755 1.5e-45 186.4 138 71.0
Atru.chr4.2063 Acer truncatum HOM05D004104 ORTHO05D004755 4.4e-45 184.9 125 76.0
Lsat_1_v5_gn_3_120420 Lactuca sativa HOM05D004104 ORTHO05D004755 7.6e-45 184.1 141 69.5
Duzib052G0511 Durio zibethinus HOM05D004104 ORTHO05D004755 4.9e-44 181.4 123 78.0
Thecc.04G255000 Theobroma cacao HOM05D004104 ORTHO05D004755 4.9e-44 181.4 123 77.2
Medtr1g069925 Medicago truncatula HOM05D004104 ORTHO05D004755 1.4e-43 179.9 140 67.9
Gohir.A02G039300 Gossypium hirsutum HOM05D004104 ORTHO05D004755 1.9e-43 179.5 123 76.4
Gohir.D02G045400 Gossypium hirsutum HOM05D004104 ORTHO05D004755 1.9e-43 179.5 123 76.4
Gorai.005G050100 Gossypium raimondii HOM05D004104 ORTHO05D004755 1.9e-43 179.5 123 76.4
HanXRQChr03g0091411 Helianthus annuus HOM05D004104 ORTHO05D004755 1.9e-43 179.5 141 68.1
Ca_09682_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 4.2e-43 178.3 141 67.4
COL.COLO4_15874 Corchorus olitorius HOM05D004104 ORTHO05D004755 4.2e-43 178.3 123 77.2
Lj5g0006581 Lotus japonicus HOM05D004104 ORTHO05D004755 4.2e-43 178.3 125 75.2
AT4G14385 Arabidopsis thaliana HOM05D004104 ORTHO05D004755 5.4e-43 177.9 123 77.2
Phvul.007G193100 Phaseolus vulgaris HOM05D004104 ORTHO05D004755 5.4e-43 177.9 140 67.9
VMungo0720G2373 Vigna mungo HOM05D004104 ORTHO05D004755 5.4e-43 177.9 140 67.9
TPR.G24709 Trifolium pratense HOM05D004104 ORTHO05D004755 9.3e-43 177.2 140 67.1
ECA240G4332 Erigeron canadensis HOM05D004104 ORTHO05D004755 1.6e-42 176.4 141 66.7
Psat6g055120 Pisum sativum HOM05D004104 ORTHO05D004755 1.6e-42 176.4 141 66.7
Duzib151G0362 Durio zibethinus HOM05D004104 ORTHO05D004755 4.6e-42 174.9 121 76.9
Glyma.10G036900 Glycine max HOM05D004104 ORTHO05D004755 4.6e-42 174.9 140 66.4
Rhsim02G0037300 Rhododendron simsii HOM05D004104 ORTHO05D004755 4.6e-42 174.9 140 65.7
Cpa.g.sc50.23 Carica papaya HOM05D004104 ORTHO05D004755 6.0e-42 174.5 125 71.2
AL7G41830 Arabidopsis lyrata HOM05D004104 ORTHO05D004755 7.8e-42 174.1 138 68.1
Nn3g19649 Nelumbo nucifera HOM05D004104 ORTHO05D004755 7.8e-42 174.1 123 76.4
QL09p038638 Quercus lobata HOM05D004104 ORTHO05D004755 7.8e-42 174.1 125 72.8
Lalb_Chr21g0313851 Lupinus albus HOM05D004104 ORTHO05D004755 1.0e-41 173.7 140 68.6
QL06p017873 Quercus lobata HOM05D004104 ORTHO05D004755 1.0e-41 173.7 140 67.9
Aa31LG9G2930 Aethionema arabicum HOM05D004104 ORTHO05D004755 1.3e-41 173.3 138 68.8
Haze_24627 Corylus avellana HOM05D005758 ORTHO05D007218 1.7e-41 172.9 140 66.4
CsaV3_7G027350 Cucumis sativus L. HOM05D004104 ORTHO05D004755 1.7e-41 172.9 125 72.0
PSO357G0016 Papaver somniferum HOM05D004104 ORTHO05D004755 1.7e-41 172.9 125 75.2
TPR.G6322 Trifolium pratense HOM05D004104 ORTHO05D004755 1.7e-41 172.9 140 65.7
TAR636G3439 Trochodendron aralioides HOM05D004104 ORTHO05D004755 1.7e-41 172.9 112 80.4
CiPaw.03G263800 Carya illinoinensis HOM05D004104 ORTHO05D004755 2.3e-41 172.6 125 73.6
Eucgr.K03263 Eucalyptus grandis HOM05D004104 ORTHO05D004755 2.3e-41 172.6 125 75.2
Nitab4.5_0001005g0090 Nicotiana tabacum HOM05D004104 ORTHO05D004755 2.3e-41 172.6 141 66.0
Ca_09886_v3 Cicer arietinum L. HOM05D004104 ORTHO05D004755 3.0e-41 172.2 141 66.7
PGR044G0499 Punica granatum HOM05D004104 ORTHO05D004755 3.9e-41 171.8 125 74.4
PSO170G1063 Papaver somniferum HOM05D004104 ORTHO05D004755 6.6e-41 171.0 125 74.4
ClCG09G007780 Citrullus lanatus HOM05D000113 ORTHO05D004634 1.1e-40 170.2 125 71.2
arahy.Tifrunner.gnm1.ann1.QEJR01 Arachis hypogaea HOM05D004104 ORTHO05D004755 1.5e-40 169.9 125 71.2
A04p07650 Brassica napus HOM05D004104 ORTHO05D004755 1.5e-40 169.9 125 72.8
BolC4t25712H Brassica oleracea HOM05D004104 ORTHO05D004755 1.5e-40 169.9 125 72.8
Solyc09g090120.3 Solanum lycopersicum HOM05D004104 ORTHO05D004755 1.5e-40 169.9 133 66.9
THA.LOC104822244 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 1.5e-40 169.9 123 71.5
Nitab4.5_0000044g0340 Nicotiana tabacum HOM05D004104 ORTHO05D004755 1.9e-40 169.5 141 65.2
Potri.002G038700 Populus trichocarpa HOM05D004104 ORTHO05D004755 1.9e-40 169.5 125 71.2
Sopen09g033030 Solanum pennellii HOM05D004104 ORTHO05D004755 1.9e-40 169.5 133 66.9
Cc03_g05510 Coffea canephora HOM05D004104 ORTHO05D004755 3.3e-40 168.7 141 61.7
TWI12G1345 Tripterygium wilfordii HOM05D004104 ORTHO05D004755 7.3e-40 167.5 125 68.0
Potri.005G223900 Populus trichocarpa HOM05D004104 ORTHO05D004755 9.6e-40 167.2 125 71.2
Sabra02G0031000 Salix brachista HOM05D004104 ORTHO05D004755 9.6e-40 167.2 125 69.6
Ciclev10006103m.g Citrus clementina HOM05D004104 ORTHO05D004755 2.8e-39 165.6 133 66.9
Manes.12G032000 Manihot esculenta HOM05D004104 ORTHO05D004755 3.6e-39 165.2 143 60.1
Sed0024271 Sechium edule HOM05D004104 ORTHO05D004755 3.6e-39 165.2 125 69.6
CDE04G2476 Ceratophyllum demersum HOM05D004104 ORTHO05D004755 6.2e-39 164.5 121 71.1
Prupe.8G224100 Prunus persica HOM05D004104 ORTHO05D004755 6.2e-39 164.5 125 72.0
vmacro15441 Vaccinium macrocarpon HOM05D004104 ORTHO05D004755 6.2e-39 164.5 116 72.4
Actinidia01846 Actinidia chinensis HOM05D004104 ORTHO05D004755 1.4e-38 163.3 141 61.0
Aqoxy2G03638 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 1.4e-38 163.3 125 73.6
CANSAT01G3088 Cannabis sativa HOM05D004104 ORTHO05D004755 1.4e-38 163.3 125 68.0
Atru.chr5.1672 Acer truncatum HOM05D004104 ORTHO05D004755 4.0e-38 161.8 125 68.8
Aqoxy2G03648 Aquilegia oxysepala HOM05D004104 ORTHO05D004755 4.0e-38 161.8 117 75.2
arahy.Tifrunner.gnm1.ann1.0Z487T Arachis hypogaea HOM05D000348 ORTHO05D000244 5.3e-38 161.4 123 69.1
TAR365G1233 Trochodendron aralioides HOM05D004104 ORTHO05D004755 9.0e-38 160.6 109 77.1
FAN15G0777 Fragaria x ananassa HOM05D005758 ORTHO05D007218 1.5e-37 159.8 125 70.4
FAN27G1683 Fragaria x ananassa HOM05D005758 ORTHO05D007218 1.5e-37 159.8 125 70.4
GSVIVG01028325001 Vitis vinifera HOM05D004104 ORTHO05D004755 1.5e-37 159.8 125 68.0
arahy.Tifrunner.gnm1.ann1.6K1PAL Arachis hypogaea HOM05D000348 ORTHO05D000244 2.6e-37 159.1 123 68.3
Glyma.13G123300 Glycine max HOM05D004104 ORTHO05D004755 2.6e-37 159.1 126 66.7
Carub.0007s2785 Capsella rubella HOM05D004104 ORTHO05D004755 3.4e-37 158.7 105 77.1
CARHR220610 Cardamine hirsuta HOM05D004104 ORTHO05D004755 3.4e-37 158.7 105 77.1
FAN20G0124 Fragaria x ananassa HOM05D004104 ORTHO05D004755 3.4e-37 158.7 125 69.6
MD10G1184400 Malus domestica HOM05D004104 ORTHO05D004755 3.4e-37 158.7 126 71.4
Thecc.01G258800 Theobroma cacao HOM05D004104 ORTHO05D004755 4.5e-37 158.3 141 62.4
Duzib211G0552 Durio zibethinus HOM05D004104 ORTHO05D004755 7.6e-37 157.5 141 63.1
Thhalv10026437m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 7.6e-37 157.5 104 77.9
RcHm_v2.0_Chr6g0288171 Rosa chinensis HOM05D004104 ORTHO05D004755 9.9e-37 157.1 115 74.8
SalBow3G2247 Salvia bowleyana HOM05D004104 ORTHO05D004755 9.9e-37 157.1 141 58.9
Sp7g12470 Schrenkiella parvula HOM05D004104 ORTHO05D004755 1.7e-36 156.4 104 76.9
Gohir.A08G190000 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.2e-36 156.0 126 66.7
BcaC02g09319 Brassica carinata HOM05D004104 ORTHO05D004755 2.9e-36 155.6 104 76.9
C04p41340 Brassica napus HOM05D004104 ORTHO05D004755 2.9e-36 155.6 104 76.9
BraA04t16456Z Brassica rapa HOM05D004104 ORTHO05D004755 2.9e-36 155.6 104 76.9
SEGI_09266 Sequoiadendron giganteum HOM05D004104 ORTHO05D004755 2.9e-36 155.6 136 61.0
COL.COLO4_05896 Corchorus olitorius HOM05D005758 ORTHO05D007218 3.8e-36 155.2 125 66.4
EL10Ac5g10403 Beta vulgaris HOM05D004104 ORTHO05D004755 6.4e-36 154.5 137 59.9
BcaB02g08611 Brassica carinata HOM05D004104 ORTHO05D004755 6.4e-36 154.5 105 77.1
AUR62011875 Chenopodium quinoa HOM05D004104 ORTHO05D004755 6.4e-36 154.5 140 59.3
Migut.G00520 Erythranthe guttata HOM05D004104 ORTHO05D004755 6.4e-36 154.5 141 58.9
Hund11888 Selenicereus undatus HOM05D004104 ORTHO05D004755 8.4e-36 154.1 119 70.6
Gohir.D08G208500 Gossypium hirsutum HOM05D004104 ORTHO05D004755 2.4e-35 152.5 141 61.7
Gorai.004G220900 Gossypium raimondii HOM05D004104 ORTHO05D004755 2.4e-35 152.5 141 61.7
TWI18G1001 Tripterygium wilfordii HOM05D004104 ORTHO05D004755 2.4e-35 152.5 159 53.5
Ah.13g072460 Amaranthus hybridus HOM05D004104 ORTHO05D004755 5.4e-35 151.4 119 68.9
unitig_21.g20174 Utricularia gibba HOM05D004104 ORTHO05D004755 7.1e-35 151.0 145 55.9
Ciclev10023660m.g Citrus clementina HOM05D004104 ORTHO05D004755 1.6e-34 149.8 155 58.7
Actinidia25786 Actinidia chinensis HOM05D004104 ORTHO05D004755 2.1e-34 149.4 140 62.1
MD05G1197800 Malus domestica HOM05D004104 ORTHO05D004755 3.5e-34 148.7 132 66.7
Cc06_g07960 Coffea canephora HOM05D004104 ORTHO05D004755 7.9e-34 147.5 125 65.6
Dinv29861 Davidia involucrata HOM05D004104 ORTHO05D004755 2.3e-33 146.0 99 73.7
Os01g0233400 Oryza sativa ssp. japonica HOM05D004104 ORTHO05D004755 3.0e-33 145.6 133 60.9
Os12g0298600 Oryza sativa ssp. japonica HOM05D004104 ORTHO05D004755 3.0e-33 145.6 133 60.9
MSTRG.18320 Avicennia marina HOM05D004104 ORTHO05D004755 5.1e-33 144.8 116 70.7
Nitab4.5_0000470g0160 Nicotiana tabacum HOM05D004104 ORTHO05D004755 5.1e-33 144.8 117 66.7
Nitab4.5_0009483g0030 Nicotiana tabacum HOM05D004104 ORTHO05D004755 5.1e-33 144.8 117 66.7
Hund02913 Selenicereus undatus HOM05D004104 ORTHO05D004755 5.1e-33 144.8 142 56.3
Rhsim01G0264300 Rhododendron simsii HOM05D004104 ORTHO05D004755 8.7e-33 144.1 125 65.6
SalBow4G1878 Salvia bowleyana HOM05D004104 ORTHO05D004755 2.5e-32 142.5 116 67.2
MSTRG.21496 Avicennia marina HOM05D004104 ORTHO05D004755 4.3e-32 141.7 116 68.1
MSTRG.9892 Avicennia marina HOM05D004104 ORTHO05D004755 5.6e-32 141.4 127 59.8
SGA_v2.0_scaffold1G00613 Striga asiatica HOM05D004104 ORTHO05D004755 5.6e-32 141.4 119 66.4
Solyc09g072580.3 Solanum lycopersicum HOM05D004104 ORTHO05D004755 7.4e-32 141.0 117 64.1
Sopen09g028390 Solanum pennellii HOM05D004104 ORTHO05D004755 7.4e-32 141.0 117 64.1
PGSC0003DMG400010299 Solanum tuberosum HOM05D004104 ORTHO05D004755 7.4e-32 141.0 117 64.1
CSS0037223 Camellia sinensis var. sinensis HOM05D004104 ORTHO05D004755 9.6e-32 140.6 111 67.6
Migut.D00423 Erythranthe guttata HOM05D004104 ORTHO05D004755 9.6e-32 140.6 116 68.1
AUR62002135 Chenopodium quinoa HOM05D004104 ORTHO05D004755 1.6e-31 139.8 169 50.9
Sabra05G0172700 Salix brachista HOM05D004104 ORTHO05D004755 2.1e-31 139.4 205 44.4
FvH4_2g21510 Fragaria vesca HOM05D005758 ORTHO05D007218 3.7e-31 138.7 169 52.1
SGA_v2.0_scaffold138G35232 Striga asiatica HOM05D000374 ORTHO05D000238 3.7e-31 138.7 116 67.2
AagrBONN_evm.TU.Sc2ySwM_228.2514 Anthoceros agrestis HOM05D004104 ORTHO05D004755 8.1e-31 137.5 135 59.3
Mapoly0055s0054 Marchantia polymorpha HOM05D004104 ORTHO05D004755 5.3e-30 134.8 125 61.6
SEGI_16929 Sequoiadendron giganteum HOM05D004104 ORTHO05D004755 5.3e-30 134.8 98 71.4
AUR62015575 Chenopodium quinoa HOM05D004104 ORTHO05D004755 6.9e-30 134.4 94 73.4
unitig_0.g154 Utricularia gibba HOM05D003973 ORTHO05D004679 6.9e-30 134.4 114 64.9
Oeu011497.1 Olea europaea HOM05D004104 ORTHO05D004755 2.0e-29 132.9 102 66.7
Manes.13G033700 Manihot esculenta HOM05D004104 ORTHO05D004755 3.4e-29 132.1 97 70.1
MBI10_g37181_MAGBIO Magnolia biondii HOM05D004104 ORTHO05D004755 4.5e-29 131.7 81 84.0
HPP92_008311 Vanilla planifolia HOM05D004104 ORTHO05D004755 5.8e-29 131.3 126 57.9
Ah.04g155820 Amaranthus hybridus HOM05D004104 ORTHO05D004755 1.3e-28 130.2 92 72.8
EL10Ac3g05008 Beta vulgaris HOM05D004104 ORTHO05D004755 1.7e-28 129.8 93 72.0
AagrBONN_evm.TU.Sc2ySwM_368.1944 Anthoceros agrestis HOM05D004104 ORTHO05D004755 2.2e-28 129.4 125 56.8
CBR_g31961 Chara braunii HOM05D004104 ORTHO05D004755 2.2e-28 129.4 135 56.3
Sc24g0003130 Simmondsia chinensis HOM05D004104 ORTHO05D004755 2.9e-28 129.0 93 69.9
HPP92_004791 Vanilla planifolia HOM05D004104 ORTHO05D004755 2.9e-28 129.0 91 73.6
Pp3c8_15220 Physcomitrium patens HOM05D004104 ORTHO05D004755 6.4e-28 127.9 139 55.4
Gohir.A07G212800 Gossypium hirsutum HOM05D004104 ORTHO05D004755 1.1e-27 127.1 117 60.7
THA.LOC104825278 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 1.1e-27 127.1 93 67.7
HanXRQChr04g0112651 Helianthus annuus HOM05D004104 ORTHO05D004755 2.4e-27 125.9 117 59.0
Actinidia32304 Actinidia chinensis HOM05D004104 ORTHO05D004755 1.6e-26 123.2 108 59.3
Gohir.D07G218900 Gossypium hirsutum HOM05D004104 ORTHO05D004755 1.6e-26 123.2 94 68.1
Lj1A66T60 Lonicera japonica HOM05D004104 ORTHO05D004755 1.6e-26 123.2 116 59.5
Gorai.001G253400 Gossypium raimondii HOM05D004104 ORTHO05D004755 2.1e-26 122.9 125 56.8
Pp3c24_15450 Physcomitrium patens HOM05D004104 ORTHO05D004755 6.0e-26 121.3 139 54.0
Lsat_1_v5_gn_8_92980 Lactuca sativa HOM05D004104 ORTHO05D004755 4.3e-24 115.2 117 58.1
ECA236G2125 Erigeron canadensis HOM05D004104 ORTHO05D004755 3.7e-23 112.1 100 62.0
Ah.11g049720 Amaranthus hybridus HOM05D004104 ORTHO05D004755 4.8e-23 111.7 101 59.4
Peaxi162Scf00855g00233 Petunia axillaris HOM05D004104 ORTHO05D004755 5.3e-22 108.2 95 60.0
arahy.Tifrunner.gnm1.ann1.2HR6HW Arachis hypogaea HOM05D004104 ORTHO05D004755 9.0e-22 107.5 152 46.1
THA.LOC104825277 Tarenaya hassleriana HOM05D004104 ORTHO05D004755 9.0e-22 107.5 82 63.4
MELO3C015732.2 Cucumis melo HOM05D004104 ORTHO05D004755 1.5e-21 106.7 237 35.4
Thhalv10002280m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 4.5e-21 105.1 97 67.0
Peaxi162Scf00543g00310 Petunia axillaris HOM05D004104 ORTHO05D004755 7.6e-21 104.4 133 48.9
SGA_v2.0_scaffold67G22747 Striga asiatica HOM05D004104 ORTHO05D004755 1.7e-20 103.2 140 42.9
PGSC0003DMG400017224 Solanum tuberosum HOM05D004104 ORTHO05D004755 8.4e-20 100.9 146 44.5
MCO10G151 Micromonas commoda HOM05D004104 ORTHO05D004755 5.5e-19 98.2 75 64.0
Thhalv10029502m.g Eutrema salsugineum HOM05D004104 ORTHO05D004755 9.3e-19 97.4 91 62.6
Duzib138G1233 Durio zibethinus HOM05D004104 ORTHO05D004755 3.0e-17 92.4 73 63.0
Dinv34620 Davidia involucrata HOM05D004104 ORTHO05D004755 3.3e-16 89.0 69 63.8
PRCOL_00002727 Prasinoderma coloniale HOM05D004104 ORTHO05D004755 8.2e-15 84.3 83 49.4
Gohir.D03G080833 Gossypium hirsutum HOM05D004104 ORTHO05D004755 1.4e-14 83.6 64 67.2
CAN.G2012.3 Capsicum annuum HOM05D004104 ORTHO05D004755 2.4e-14 82.8 75 60.0
Gorai.003G083000 Gossypium raimondii HOM05D004104 ORTHO05D004755 5.3e-14 81.6 64 67.2
Zm00001eb188390 Zea mays HOM05D004104 ORTHO05D004755 2.6e-13 79.3 60 63.3
Actinidia11346 Actinidia chinensis HOM05D004104 ORTHO05D004755 2.2e-12 76.3 67 58.2
Cre07.g328450 Chlamydomonas reinhardtii HOM05D004104 ORTHO05D004755 3.3e-08 62.4 76 46.1
THA.LOC104825261 Tarenaya hassleriana HOM05D013951 ORTHO05D021024 9.7e-08 60.8 88 44.3
CAN.G896.9 Capsicum annuum HOM05D004104 ORTHO05D004755 1.3e-07 60.5 48 72.9
Cre06.g291200 Chlamydomonas reinhardtii HOM05D004104 ORTHO05D004755 3.7e-07 58.9 84 41.7
arahy.Tifrunner.gnm1.ann1.A8QM82 Arachis hypogaea HOM05D004104 ORTHO05D004755 1.4e-06 57.0 36 69.4


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