Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G211261 Manihot esculenta HOM05D007305 ORTHO05D009886 1.7e-131 472.6 234 100.0
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 2.3e-104 382.5 246 80.9
Manes.15G058801 Manihot esculenta HOM05D007305 ORTHO05D009886 3.5e-76 288.9 196 76.0
Manes.09G001301 Manihot esculenta HOM05D007305 ORTHO05D009886 1.3e-73 280.4 233 66.1
Manes.07G072314 Manihot esculenta HOM05D007305 ORTHO05D009886 5.6e-66 255.0 202 70.8
Sabra06G0016700 Salix brachista HOM05D000027 ORTHO05D000066 1.3e-62 243.8 245 55.5
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 4.9e-62 241.9 246 54.9
Sabra17G0125400 Salix brachista HOM05D007305 ORTHO05D009886 4.9e-62 241.9 246 54.9
Sabra16G0035300 Salix brachista HOM05D007305 ORTHO05D009886 1.1e-61 240.7 246 54.9
Sabra04G0080000 Salix brachista HOM05D007305 ORTHO05D009886 2.3e-59 233.0 246 54.5
Manes.06G147450 Manihot esculenta HOM05D007305 ORTHO05D009886 3.9e-59 232.3 163 76.1
Sabra07G0082100 Salix brachista HOM05D007305 ORTHO05D009886 1.3e-57 227.3 231 54.5
Manes.13G079525 Manihot esculenta HOM05D007305 ORTHO05D009886 3.7e-57 225.7 143 81.1
Manes.06G030066 Manihot esculenta HOM05D007305 ORTHO05D009886 9.0e-56 221.1 203 63.5
Sabra18G0102700 Salix brachista HOM05D007305 ORTHO05D009886 2.0e-55 219.9 232 53.9
Manes.13G089260 Manihot esculenta HOM05D007305 ORTHO05D009886 1.0e-54 217.6 177 68.4
Manes.09G019650 Manihot esculenta HOM05D007305 ORTHO05D009886 6.5e-54 214.9 166 68.7
Manes.01G039012 Manihot esculenta HOM05D007305 ORTHO05D009886 1.1e-53 214.2 129 84.5
Manes.15G168650 Manihot esculenta HOM05D007305 ORTHO05D009886 1.2e-47 194.1 129 78.3
Manes.08G072166 Manihot esculenta HOM05D007305 ORTHO05D009886 2.5e-45 186.4 146 68.5
Manes.18G035550 Manihot esculenta HOM05D007305 ORTHO05D009886 7.2e-45 184.9 139 71.9
Manes.18G104116 Manihot esculenta HOM05D007305 ORTHO05D009886 5.1e-43 178.7 107 83.2
Sabra11G0081600 Salix brachista HOM05D007305 ORTHO05D009886 2.6e-42 176.4 246 45.5
Manes.05G187732 Manihot esculenta HOM05D007305 ORTHO05D009886 6.9e-40 168.3 111 76.6
Manes.13G105340 Manihot esculenta HOM05D007305 ORTHO05D009886 3.8e-38 162.5 131 67.2
SHI07334 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-37 159.5 191 47.6
Cpa.g.sc74.28 Carica papaya HOM05D007305 ORTHO05D009886 4.7e-36 155.6 146 58.9
Sed0002096 Sechium edule HOM05D007305 ORTHO05D009886 4.8e-33 145.6 229 39.7
Cpa.g.sc37.32 Carica papaya HOM05D007305 ORTHO05D009886 7.0e-32 141.7 122 60.7
CANSAT78G2514 Cannabis sativa HOM05D007305 ORTHO05D009886 1.6e-31 140.6 155 51.6
SHI27433 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-31 140.6 154 47.4
SHI35106 Sapria himalayana HOM05D007305 ORTHO05D009886 4.5e-31 139.0 240 38.8
Manes.16G035125 Manihot esculenta HOM05D007305 ORTHO05D009886 1.3e-30 137.5 109 66.1
SHI11625 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-30 135.2 225 38.2
CANSAT35G1669 Cannabis sativa HOM05D007305 ORTHO05D009886 2.0e-26 123.6 115 60.0
TWI79G0335 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 3.3e-26 122.9 259 33.6
SHI26716 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-26 122.5 132 47.0
SHI36811 Sapria himalayana HOM05D007305 ORTHO05D009886 1.8e-24 117.1 123 48.0
SHI36830 Sapria himalayana HOM05D007305 ORTHO05D009886 1.8e-24 117.1 123 48.0
SHI25004 Sapria himalayana HOM05D007305 ORTHO05D009886 5.3e-24 115.5 208 37.0
Gohir.D03G068902 Gossypium hirsutum HOM05D007305 ORTHO05D009886 5.9e-23 112.1 145 44.8
Gorai.003G091400 Gossypium raimondii HOM05D007305 ORTHO05D009886 3.8e-22 109.4 145 43.4
SHI26075 Sapria himalayana HOM05D007305 ORTHO05D009886 1.8e-19 100.5 134 43.3
SHI27171 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-19 100.5 158 38.6
SHI26584 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-18 95.9 154 37.7
SHI17822 Sapria himalayana HOM05D000002 ORTHO05D009886 7.5e-18 95.1 154 36.4
SHI21345 Sapria himalayana HOM05D000002 ORTHO05D009886 7.5e-18 95.1 210 32.4
TWI74G0014 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 8.3e-17 91.7 179 32.4
TWI14G0936 Tripterygium wilfordii HOM05D007305 ORTHO05D009886 3.1e-16 89.7 180 31.1
vmacro13138 Vaccinium macrocarpon HOM05D001282 ORTHO05D009886 7.7e-15 85.1 161 34.8
Eucgr.G01582 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.0e-14 84.7 256 27.0
SHI14083 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-14 84.3 154 36.4
Eucgr.H03782 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.7e-14 84.0 256 27.0
Oeu056823.1 Olea europaea HOM05D023524 ORTHO05D009886 1.7e-14 84.0 156 34.6
vmacro12534 Vaccinium macrocarpon HOM05D000671 ORTHO05D004414 2.3e-14 83.6 161 32.3
vmacro14864 Vaccinium macrocarpon HOM05D001069 ORTHO05D009886 5.0e-14 82.4 155 32.9
SHI24240 Sapria himalayana HOM05D007305 ORTHO05D009886 6.5e-14 82.0 77 53.2
SHI26071 Sapria himalayana HOM05D000002 ORTHO05D009886 2.1e-12 77.0 80 47.5
vmacro15092 Vaccinium macrocarpon HOM05D005784 ORTHO05D007803 3.6e-12 76.3 201 29.4
SHI32097 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-12 75.1 251 29.5
Oeu036242.1 Olea europaea HOM05D007305 ORTHO05D009886 1.0e-11 74.7 147 31.3
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 1.0e-11 74.7 214 27.1
ECA236G1318 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-11 74.3 188 28.2
SHI17283 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-11 74.3 106 40.6
Sopen11g020850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-11 73.9 147 32.0
SHI29753 Sapria himalayana HOM05D001030 ORTHO05D000001 2.3e-11 73.6 247 28.7
vmacro05505 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 2.3e-11 73.6 153 30.1
SHI30681 Sapria himalayana HOM05D000002 ORTHO05D000001 4.0e-11 72.8 101 39.6
SHI10701 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-11 72.4 251 29.5
SHI12381 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-11 72.4 66 56.1
SHI17232 Sapria himalayana HOM05D000002 ORTHO05D000001 5.2e-11 72.4 253 27.7
SHI09975 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-10 70.9 246 29.3
vmacro23149 Vaccinium macrocarpon HOM05D064014 ORTHO05D000047 1.5e-10 70.9 213 27.7
Sopen07g006560 Solanum pennellii HOM05D000002 ORTHO05D000001 3.4e-10 69.7 211 26.1
vmacro23376 Vaccinium macrocarpon HOM05D001558 ORTHO05D003061 5.7e-10 68.9 220 29.1
Oeu019485.1 Olea europaea HOM05D023524 ORTHO05D009886 9.8e-10 68.2 148 33.1
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 1.3e-09 67.8 153 28.8
Manes.16G056009 Manihot esculenta HOM05D000002 ORTHO05D000001 1.7e-09 67.4 232 28.4
SHI21600 Sapria himalayana HOM05D000002 ORTHO05D009886 2.2e-09 67.0 244 26.2
SHI49787 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-09 67.0 244 27.9
CiPaw.06G151000 Carya illinoinensis HOM05D007305 ORTHO05D009886 2.8e-09 66.6 98 36.7
SHI17479 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-09 66.6 85 45.9
vmacro19208 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 3.7e-09 66.2 147 27.2
SHI35060 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-09 65.5 241 27.0
SHI27000 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 64.7 97 37.1
SHI47361 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 64.7 174 30.5
Gohir.D02G188650 Gossypium hirsutum HOM05D062835 ORTHO05D009886 2.4e-08 63.5 71 52.1
Gohir.D09G054350 Gossypium hirsutum HOM05D056255 ORTHO05D047221 2.4e-08 63.5 122 36.1
Gorai.005G211400 Gossypium raimondii HOM05D062835 ORTHO05D009886 4.1e-08 62.8 71 52.1
SHI21873 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-08 62.8 198 28.3
Sopen12g009620 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-08 62.8 147 27.2
QL05p014573 Quercus lobata HOM05D000002 ORTHO05D000001 5.4e-08 62.4 224 25.0
QL11p016085 Quercus lobata HOM05D000002 ORTHO05D000001 5.4e-08 62.4 224 25.0
vmacro22188 Vaccinium macrocarpon HOM05D005356 ORTHO05D006596 5.4e-08 62.4 210 29.0
Sopen11g023560 Solanum pennellii HOM05D000002 ORTHO05D000001 9.2e-08 61.6 66 56.1
Lalb_Chr23g0273761 Lupinus albus HOM05D000002 ORTHO05D000047 1.2e-07 61.2 177 27.1
vmacro10451 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 1.2e-07 61.2 207 28.0
CAN.G710.25 Capsicum annuum HOM05D000011 ORTHO05D007164 1.6e-07 60.8 169 26.6
SEGI_10748 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.6e-07 60.8 229 21.8
Ah.07g205280 Amaranthus hybridus HOM05D000002 ORTHO05D000001 2.0e-07 60.5 182 26.9
SHI32606 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-07 60.5 174 27.6
vmacro07032 Vaccinium macrocarpon HOM05D030287 ORTHO05D018099 2.0e-07 60.5 106 33.0
FvH4_2g04952 Fragaria vesca HOM05D000002 ORTHO05D000047 2.7e-07 60.1 237 23.2
Sopen01g036790 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 60.1 244 25.0
Sopen01g037740 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 60.1 245 24.9
Sopen10g020710 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-07 60.1 245 24.9
SEGI_17012 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.5e-07 59.7 229 21.8
Sopen05g009210 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-07 59.7 227 24.7
Sopen09g007300 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-07 59.7 227 24.7
Cpa.g.sc114.45 Carica papaya HOM05D007305 ORTHO05D009886 4.5e-07 59.3 63 52.4
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 4.5e-07 59.3 240 27.1
Manes.13G009802 Manihot esculenta HOM05D000002 ORTHO05D000001 4.5e-07 59.3 161 28.6
SHI07176 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-07 59.3 152 32.9
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 4.5e-07 59.3 71 46.5
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 4.5e-07 59.3 106 31.1
TAR129G0002 Trochodendron aralioides HOM05D007305 ORTHO05D009886 5.9e-07 58.9 77 41.6
vmacro11232 Vaccinium macrocarpon HOM05D000104 ORTHO05D003467 5.9e-07 58.9 141 30.5
Ciclev10017996m.g Citrus clementina HOM05D000002 ORTHO05D000047 7.8e-07 58.5 139 23.0
SEGI_27629 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.0e-06 58.2 149 24.2
Sopen07g026850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-06 58.2 227 24.7
Sopen02g013170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.3e-06 57.8 245 24.5
CAN.G1676.14 Capsicum annuum HOM05D000002 ORTHO05D000001 1.7e-06 57.4 147 29.3
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 1.7e-06 57.4 243 24.3
Sopen03g025810 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-06 57.4 239 24.7
Sopen09g015780 Solanum pennellii HOM05D000002 ORTHO05D000001 1.7e-06 57.4 192 25.5
vmacro03330 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 1.7e-06 57.4 106 35.8
ECA246G4200 Erigeron canadensis HOM05D001707 ORTHO05D000001 2.3e-06 57.0 190 26.8
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 2.9e-06 56.6 223 24.7
vmacro00602 Vaccinium macrocarpon HOM05D007305 ORTHO05D009886 2.9e-06 56.6 250 24.4
Sopen06g011710 Solanum pennellii HOM05D000002 ORTHO05D000001 3.8e-06 56.2 219 23.3
TWI73G0357 Tripterygium wilfordii HOM05D023524 ORTHO05D009886 3.8e-06 56.2 142 30.3
CANSAT01G0665 Cannabis sativa HOM05D000002 ORTHO05D000047 5.0e-06 55.8 184 23.9
CANSAT50G0003 Cannabis sativa HOM05D000002 ORTHO05D000047 5.0e-06 55.8 241 23.2
RcHm_v2.0_Chr1g0341931 Rosa chinensis HOM05D000002 ORTHO05D000047 5.0e-06 55.8 228 26.3
SHI31578 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-06 55.8 72 43.1
SEGI_33603 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.0e-06 55.8 249 22.1
Sopen11g013670 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 55.8 244 25.0
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 6.6e-06 55.5 223 24.7
Lalb_Chr15g0078731 Lupinus albus HOM05D000002 ORTHO05D000047 6.6e-06 55.5 207 27.1
SHI20378 Sapria himalayana HOM05D000002 ORTHO05D009886 6.6e-06 55.5 123 34.1
SEGI_41209 Sequoiadendron giganteum HOM05D001800 ORTHO05D000047 6.6e-06 55.5 191 22.0
Thecc.04G308500 Theobroma cacao HOM05D007305 ORTHO05D009886 6.6e-06 55.5 54 55.6
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 8.6e-06 55.1 223 24.7
SHI20230 Sapria himalayana HOM05D000002 ORTHO05D000001 8.6e-06 55.1 93 34.4
SEGI_03840 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 8.6e-06 55.1 223 21.5
Solyc04g025283.1 Solanum lycopersicum HOM05D007305 ORTHO05D009886 8.6e-06 55.1 83 45.8


User provided reference genes

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