Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 7.7e-247 856.7 427 100.0
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 3.1e-211 738.4 430 85.8
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 6.4e-209 730.7 422 85.8
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 5.1e-206 721.1 422 84.8
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.1e-205 719.9 421 82.9
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 3.1e-203 711.8 427 81.5
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 8.4e-201 703.7 427 81.3
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 6.6e-198 694.1 419 82.8
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 6.6e-198 694.1 423 81.3
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 8.7e-198 693.7 421 82.2
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 5.6e-197 691.0 424 80.2
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 2.1e-196 689.1 427 78.5
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 2.1e-196 689.1 431 77.7
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 4.8e-196 688.0 421 80.8
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 6.2e-196 687.6 419 80.4
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 1.8e-195 686.0 458 75.5
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 2.4e-195 685.6 427 79.2
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 9.9e-194 680.2 419 79.5
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 1.6e-191 672.9 422 78.0
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 1.3e-190 669.8 420 78.1
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 3.0e-190 668.7 426 77.2
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.1e-189 666.8 421 77.9
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 4.3e-189 664.8 427 76.1
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 5.6e-189 664.5 429 76.0
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 7.4e-189 664.1 427 76.6
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 9.6e-189 663.7 419 76.8
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.1e-188 662.5 419 76.8
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 2.8e-188 662.1 427 76.3
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 3.1e-187 658.7 420 76.0
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 5.3e-187 657.9 429 75.8
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 5.3e-187 657.9 429 75.8
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 6.9e-187 657.5 425 77.9
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 9.0e-187 657.1 437 75.5
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 1.5e-186 656.4 428 74.8
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 2.0e-186 656.0 426 76.5
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 1.7e-185 652.9 429 75.1
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 2.9e-185 652.1 427 75.6
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 6.4e-185 651.0 422 74.6
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 7.1e-184 647.5 427 75.4
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 2.1e-183 646.0 433 73.2
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 2.1e-183 646.0 431 73.8
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 7.9e-183 644.0 418 76.6
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 1.8e-182 642.9 418 76.3
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 3.9e-182 641.7 429 72.7
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 6.7e-182 641.0 412 76.9
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 2.5e-181 639.0 422 75.6
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 5.6e-181 637.9 426 74.4
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 7.4e-181 637.5 419 75.2
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 1.3e-180 636.7 433 72.7
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 3.7e-180 635.2 433 71.4
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 8.2e-180 634.0 419 75.2
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 8.2e-180 634.0 433 71.1
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 1.1e-179 633.6 418 72.2
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.1e-179 633.6 420 73.3
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.1e-179 633.6 418 75.8
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.1e-179 633.6 433 70.9
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 2.4e-179 632.5 456 68.9
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 5.3e-179 631.3 433 72.3
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 5.3e-179 631.3 433 72.3
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 6.9e-179 630.9 433 72.3
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 1.5e-178 629.8 431 71.9
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.5e-178 629.8 418 73.4
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 2.0e-178 629.4 435 70.8
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 2.0e-178 629.4 441 70.5
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 3.4e-178 628.6 433 72.3
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.0e-177 627.1 419 74.2
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 1.3e-177 626.7 424 71.2
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 3.8e-177 625.2 430 70.7
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 3.8e-177 625.2 448 70.3
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.9e-177 624.8 419 74.0
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 4.9e-177 624.8 429 72.0
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 8.4e-177 624.0 423 73.5
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 1.4e-176 623.2 431 73.1
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.4e-176 623.2 429 72.0
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 3.2e-176 622.1 431 70.8
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 5.5e-176 621.3 424 72.4
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 5.5e-176 621.3 430 70.0
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 7.1e-176 620.9 424 72.6
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 4.6e-175 618.2 419 71.4
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 4.6e-175 618.2 418 71.8
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 4.6e-175 618.2 418 71.8
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 4.6e-175 618.2 434 69.8
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 5.1e-174 614.8 424 71.9
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 3.7e-172 608.6 529 61.4
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 3.4e-170 602.1 420 69.0
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 5.5e-168 594.7 466 63.1
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 7.2e-168 594.3 430 68.1
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 7.2e-168 594.3 429 67.4
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.2e-167 593.6 419 69.5
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 3.6e-167 592.0 429 66.4
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 3.6e-167 592.0 419 70.4
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 6.1e-167 591.3 420 68.6
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 7.9e-167 590.9 427 69.3
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 8.8e-166 587.4 429 67.1
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 1.9e-165 586.3 421 69.1
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 4.3e-165 585.1 421 69.1
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 1.8e-163 579.7 427 64.6
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 1.5e-157 560.1 421 65.1
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 2.9e-153 545.8 423 61.9
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 2.5e-152 542.7 416 65.6
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 6.1e-151 538.1 334 79.3
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 3.0e-150 535.8 432 60.9
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 2.9e-145 519.2 355 69.9
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 2.4e-139 499.6 430 57.4
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 2.2e-137 493.0 421 56.1
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 5.5e-136 488.4 444 57.9
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.0e-134 484.2 350 70.3
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 8.8e-134 481.1 425 58.8
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 2.2e-132 476.5 422 55.2
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 2.7e-130 469.5 423 53.7
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 2.5e-128 463.0 431 58.9
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 2.3e-126 456.4 298 73.2
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 6.6e-121 438.3 265 80.0
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 2.5e-120 436.4 426 49.5
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 4.4e-117 425.6 430 54.2
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 1.6e-114 417.2 244 82.0
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 3.9e-89 332.8 192 83.3
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 1.1e-83 314.7 423 43.3
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 3.4e-77 293.1 245 57.6
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 6.9e-70 268.9 183 73.2
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 2.0e-69 267.3 291 51.2
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 2.8e-55 220.3 137 81.0
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 4.7e-34 149.8 101 68.3
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 2.3e-33 147.5 101 70.3
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 1.2e-29 135.2 103 60.2
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 2.2e-23 114.4 89 57.3
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 1.4e-14 85.1 361 24.4
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 4.5e-13 80.1 100 45.0
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 5.7e-08 63.2 41 65.9


User provided reference genes

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