Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 2.8e-213 745.0 370 100.0
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 9.0e-151 537.3 360 74.2
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 3.8e-149 531.9 376 73.9
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 8.4e-149 530.8 368 73.9
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 9.3e-148 527.3 370 72.7
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 2.7e-147 525.8 329 77.5
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 3.5e-147 525.4 323 78.3
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 7.9e-147 524.2 327 75.5
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 1.3e-146 523.5 327 76.8
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 1.3e-146 523.5 326 79.1
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 3.9e-146 521.9 335 75.2
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 3.9e-146 521.9 332 76.5
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 5.1e-146 521.5 361 72.0
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 6.7e-146 521.2 361 72.3
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 1.1e-145 520.4 338 75.7
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 3.3e-145 518.8 324 76.2
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 4.3e-145 518.5 326 77.0
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 2.8e-144 515.8 366 69.1
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.1e-143 513.8 330 74.8
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 1.8e-143 513.1 331 75.2
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 2.4e-143 512.7 365 68.8
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 4.0e-143 511.9 339 73.7
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 4.0e-143 511.9 366 70.2
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 1.5e-142 510.0 388 66.2
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 1.5e-142 510.0 352 69.9
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 2.0e-142 509.6 335 73.4
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 3.4e-142 508.8 373 70.5
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 7.6e-142 507.7 327 74.3
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 1.0e-141 507.3 351 70.9
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 2.2e-141 506.1 387 65.9
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 2.5e-140 502.7 351 69.8
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 7.1e-140 501.1 326 74.5
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 9.3e-140 500.7 351 70.1
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 3.5e-139 498.8 326 75.5
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 6.1e-139 498.0 369 66.9
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 1.0e-138 497.3 368 66.0
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 2.3e-138 496.1 368 65.8
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 2.3e-138 496.1 329 70.5
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 5.1e-138 495.0 356 66.9
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 5.1e-138 495.0 323 75.5
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 8.7e-138 494.2 324 72.2
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 1.9e-137 493.0 329 71.7
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 2.5e-137 492.7 365 68.5
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 3.3e-137 492.3 327 70.9
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 3.3e-137 492.3 328 70.1
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 3.3e-137 492.3 329 69.9
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 4.3e-137 491.9 350 70.3
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 4.3e-137 491.9 325 70.8
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 9.7e-137 490.7 353 69.1
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 1.3e-136 490.3 335 72.2
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 2.2e-136 489.6 329 70.8
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 2.8e-136 489.2 324 70.7
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 3.7e-136 488.8 337 72.1
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 8.2e-136 487.6 326 70.6
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 1.1e-135 487.3 372 65.3
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.4e-135 486.1 312 76.3
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 4.1e-135 485.3 372 64.8
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 4.5e-134 481.9 326 73.0
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 3.8e-133 478.8 312 72.8
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 3.2e-132 475.7 328 70.7
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 4.2e-132 475.3 380 64.7
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 1.2e-131 473.8 360 65.8
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 2.7e-131 472.6 327 67.3
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 7.4e-129 464.5 387 63.8
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 1.7e-128 463.4 364 64.8
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 1.8e-127 459.9 341 64.2
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 3.4e-126 455.7 338 65.7
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 3.4e-126 455.7 389 58.9
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 5.9e-126 454.9 315 69.5
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 7.7e-126 454.5 337 64.4
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 1.0e-125 454.1 338 65.4
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 3.8e-125 452.2 362 61.9
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 3.8e-125 452.2 307 71.0
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 1.4e-124 450.3 322 68.3
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 7.2e-124 448.0 353 63.5
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 1.2e-123 447.2 313 68.7
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 1.2e-123 447.2 326 66.0
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 3.6e-123 445.7 326 66.3
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 6.1e-123 444.9 349 64.2
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 1.8e-122 443.4 316 68.0
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 3.9e-122 442.2 332 65.7
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 6.7e-122 441.4 322 68.3
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 2.0e-121 439.9 332 64.8
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 2.6e-121 439.5 322 66.5
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 7.4e-121 438.0 322 65.5
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 1.7e-120 436.8 324 65.1
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 2.0e-118 429.9 324 64.8
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 4.5e-118 428.7 324 63.9
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 1.0e-117 427.6 332 63.6
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 1.3e-117 427.2 291 70.8
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 2.5e-116 422.9 313 68.4
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 2.5e-116 422.9 313 68.4
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 7.2e-116 421.4 365 57.8
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 1.2e-115 420.6 289 72.7
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 3.6e-115 419.1 324 62.7
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 6.1e-115 418.3 320 66.9
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 8.0e-115 417.9 314 65.0
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 8.0e-115 417.9 602 43.0
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 6.7e-114 414.8 323 61.6
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 6.7e-114 414.8 280 69.3
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 2.4e-111 406.4 287 67.2
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 1.2e-110 404.1 328 62.5
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 1.3e-109 400.6 330 58.5
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 6.5e-109 398.3 238 74.4
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 3.0e-106 389.4 330 60.0
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 4.0e-106 389.0 318 62.3
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 1.2e-105 387.5 279 64.9
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 1.5e-105 387.1 332 56.3
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 2.0e-105 386.7 316 61.7
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 4.4e-105 385.6 263 69.6
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 9.8e-105 384.4 327 57.5
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 1.9e-100 370.2 372 54.0
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 1.9e-100 370.2 264 66.3
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 4.2e-100 369.0 295 62.0
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 6.1e-99 365.2 275 65.1
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 2.3e-98 363.2 349 54.2
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 7.2e-92 341.7 251 62.9
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 1.4e-90 337.4 199 79.4
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 6.8e-90 335.1 333 50.2
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 2.6e-89 333.2 204 76.0
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 4.6e-86 322.4 300 54.0
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 6.8e-82 308.5 324 46.0
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 4.9e-80 302.4 176 81.2
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 3.2e-71 273.1 313 48.6
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.3e-69 267.7 205 65.9
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 1.3e-69 267.7 213 69.0
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 1.3e-69 267.7 381 44.1
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 5.1e-69 265.8 304 48.4
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 2.8e-67 260.0 245 51.4
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 1.5e-65 254.2 289 43.6
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 1.7e-56 224.2 256 45.3
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 9.3e-55 218.4 136 75.0
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 3.9e-53 213.0 248 44.4
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.8e-51 206.8 196 56.1
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 1.8e-50 204.1 160 60.0
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 5.4e-47 192.6 289 36.0
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 1.6e-46 191.0 209 49.3
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 2.1e-46 190.7 211 49.3
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.7e-45 187.6 131 69.5
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 1.2e-38 164.9 346 34.7
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 3.3e-36 156.8 163 47.9
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 4.0e-34 149.8 81 86.4
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 3.0e-29 133.7 156 50.6
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 3.5e-22 110.2 117 48.7
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 1.8e-21 107.8 180 36.7
Haze_27035 Corylus avellana HOM05D000050 ORTHO05D005451 6.7e-21 105.9 273 30.4
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 9.0e-18 95.5 87 57.5
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 9.0e-18 95.5 87 57.5
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 2.5e-15 87.4 57 75.4
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 1.6e-14 84.7 48 83.3
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 5.1e-13 79.7 71 53.5
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 7.4e-12 75.9 112 42.9
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 9.1e-10 68.9 55 63.6
Nn1g08661 Nelumbo nucifera HOM05D004729 ORTHO05D005451 5.9e-09 66.2 46 58.7
CSS0043726 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 4.7e-06 56.6 27 88.9


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