Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 4.4e-155 551.2 273 100.0
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.3e-133 479.9 267 89.5
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 6.2e-133 477.6 265 89.8
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 1.1e-132 476.9 265 87.9
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 1.4e-132 476.5 273 86.1
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.8e-132 476.1 273 86.4
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 3.1e-132 475.3 265 87.5
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 1.5e-131 473.0 271 85.2
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 4.5e-131 471.5 265 86.4
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 4.5e-131 471.5 273 85.0
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 7.6e-131 470.7 273 85.3
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 1.3e-130 469.9 268 85.4
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 2.2e-130 469.2 271 84.5
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 2.9e-130 468.8 271 85.6
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 8.4e-130 467.2 271 84.1
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 8.4e-130 467.2 271 84.1
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 1.1e-129 466.8 265 86.0
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 1.4e-129 466.5 265 86.4
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 1.9e-129 466.1 271 83.8
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 4.2e-129 464.9 262 87.4
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 5.5e-129 464.5 265 86.0
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 9.3e-129 463.8 267 85.8
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 9.3e-129 463.8 267 85.8
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 9.3e-129 463.8 273 85.0
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 3.5e-128 461.8 273 84.6
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 4.6e-128 461.5 265 85.3
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 6.7e-127 457.6 271 82.3
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 6.7e-127 457.6 269 85.1
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.5e-126 456.4 264 85.2
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 1.5e-126 456.4 264 84.8
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 4.3e-126 454.9 265 84.2
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 2.2e-125 452.6 268 83.6
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 2.2e-125 452.6 265 83.0
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 2.8e-125 452.2 268 82.8
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 3.7e-125 451.8 268 81.3
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 4.8e-125 451.4 268 82.8
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 4.8e-125 451.4 268 82.8
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 6.3e-125 451.1 269 80.3
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 6.3e-125 451.1 268 82.5
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 6.3e-125 451.1 268 82.1
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 8.2e-125 450.7 264 85.6
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.4e-124 449.9 264 83.3
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 1.4e-124 449.9 265 83.4
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 1.8e-124 449.5 268 82.1
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 2.4e-124 449.1 265 81.5
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.4e-124 449.1 268 81.0
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 2.4e-124 449.1 270 80.0
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 2.4e-124 449.1 286 79.7
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.1e-124 448.7 265 82.3
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 1.2e-123 446.8 265 81.1
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 2.0e-123 446.0 265 82.6
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 2.0e-123 446.0 264 81.8
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 2.6e-123 445.7 268 81.7
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.6e-123 445.7 259 83.0
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 4.5e-123 444.9 263 81.4
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 5.9e-123 444.5 265 82.3
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.7e-122 443.0 268 80.2
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 3.8e-122 441.8 263 81.0
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 3.8e-122 441.8 263 81.0
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 5.0e-122 441.4 268 81.0
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 1.1e-121 440.3 263 80.6
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.9e-121 439.5 268 80.6
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 9.4e-121 437.2 268 81.3
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 9.4e-121 437.2 265 79.6
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 1.2e-120 436.8 265 80.0
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 2.1e-120 436.0 265 79.2
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 2.1e-120 436.0 264 79.2
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.7e-120 435.6 269 78.8
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 6.7e-119 431.0 268 78.4
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 6.7e-119 431.0 268 77.2
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 6.7e-119 431.0 292 73.3
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 8.8e-119 430.6 246 86.6
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 1.1e-118 430.3 265 79.2
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 1.5e-118 429.9 268 78.0
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 3.3e-118 428.7 265 78.1
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 5.7e-118 427.9 264 77.3
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 9.7e-118 427.2 293 74.1
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 9.7e-118 427.2 288 73.6
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 1.7e-117 426.4 270 75.9
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 3.7e-117 425.2 272 76.5
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 6.3e-117 424.5 264 77.3
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 1.4e-116 423.3 269 76.6
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 2.4e-116 422.5 265 77.7
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 3.1e-116 422.2 265 76.6
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 5.3e-116 421.4 246 83.3
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 6.9e-116 421.0 262 75.2
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 1.2e-115 420.2 265 77.4
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 1.5e-115 419.9 247 83.4
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 2.0e-115 419.5 264 76.5
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 3.4e-115 418.7 246 83.7
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 5.9e-115 417.9 264 78.0
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.3e-114 416.8 270 75.6
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.8e-114 415.2 265 76.2
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.9e-113 412.9 263 76.8
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.2e-113 412.1 264 78.0
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 4.2e-113 411.8 265 75.8
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 5.5e-113 411.4 262 76.7
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 2.7e-112 409.1 278 75.2
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 2.7e-112 409.1 263 76.4
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 1.8e-111 406.4 269 73.6
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 1.8e-111 406.4 260 75.0
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 5.1e-111 404.8 260 75.0
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 8.8e-111 404.1 247 80.6
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 1.1e-110 403.7 260 75.4
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 1.1e-110 403.7 247 78.9
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 2.6e-110 402.5 260 75.0
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 3.3e-110 402.1 261 74.7
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 4.4e-110 401.7 270 73.3
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 4.4e-110 401.7 260 74.2
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 5.7e-110 401.4 265 74.0
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 7.4e-110 401.0 268 71.3
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 7.4e-110 401.0 261 74.7
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 2.2e-109 399.4 261 74.3
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 2.8e-109 399.1 270 72.6
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 4.8e-109 398.3 291 68.7
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 1.1e-108 397.1 263 73.8
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 5.3e-108 394.8 260 73.1
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.2e-106 389.4 247 76.5
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 2.2e-106 389.4 247 76.5
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 6.5e-106 387.9 307 65.8
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 8.5e-106 387.5 271 69.4
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 1.6e-104 383.3 273 71.8
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 1.6e-104 383.3 242 77.3
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 4.7e-104 381.7 257 70.8
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.1e-102 377.1 261 74.3
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 4.1e-100 368.6 464 46.3
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 9.1e-100 367.5 265 70.2
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 4.5e-99 365.2 232 76.7
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 3.8e-98 362.1 280 67.5
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 5.0e-98 361.7 268 69.4
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 1.1e-92 344.0 192 89.1
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 2.4e-92 342.8 202 86.1
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.3e-90 337.0 267 66.3
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 9.4e-89 330.9 208 77.4
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 1.5e-86 323.6 266 59.8
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 1.2e-83 313.9 269 57.6
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 7.7e-83 311.2 263 63.1
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 8.0e-80 301.2 259 58.7
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 7.8e-75 284.6 163 85.9
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.9e-73 280.0 162 83.3
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 4.3e-65 252.3 212 61.8
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.6e-64 250.4 165 73.3
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 1.6e-64 250.4 149 78.5
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 6.8e-63 245.0 147 80.3
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 7.5e-62 241.5 161 71.4
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.6e-56 223.8 147 75.5
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 3.6e-56 222.6 288 43.8
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 3.9e-50 202.6 197 55.3
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 5.2e-47 192.2 120 81.7
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.2e-45 186.8 102 89.2
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 7.8e-43 178.3 279 40.9
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 9.6e-41 171.4 103 80.6
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 9.9e-38 161.4 194 47.9
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.9e-37 159.8 100 73.0
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.5e-27 126.3 213 38.5
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 4.6e-27 125.9 71 88.7
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 7.9e-27 125.2 250 32.8
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 3.7e-24 116.3 61 93.4
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 3.7e-24 116.3 252 34.5
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 4.8e-24 115.9 71 76.1
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 2.9e-21 106.7 204 36.3
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 3.8e-21 106.3 63 76.2
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 2.7e-19 100.1 57 82.5
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 1.1e-17 94.7 56 83.9
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 2.4e-07 60.5 35 74.3


User provided reference genes

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