Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 5.2e-152 541.2 311 100.0
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 1.7e-86 323.6 305 63.6
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 5.8e-50 202.2 330 44.5
CsaV3_6G015830 Cucumis sativus L. HOM05D006785 ORTHO05D006259 2.8e-44 183.3 316 42.4
ClCG02G018390 Citrullus lanatus HOM05D006785 ORTHO05D006259 6.8e-43 178.7 328 41.8
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 1.7e-38 164.1 332 39.5
Potri.005G201400 Populus trichocarpa HOM05D006785 ORTHO05D006259 2.3e-38 163.7 306 42.5
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 1.2e-36 157.9 338 41.1
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 2.1e-36 157.1 320 37.8
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 2.8e-36 156.8 329 41.0
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 8.1e-36 155.2 321 41.4
MD09G1151900 Malus domestica HOM05D006785 ORTHO05D006259 2.2e-33 147.1 241 44.4
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 8.4e-33 145.2 343 37.9
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 1.1e-32 144.8 328 35.1
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 1.4e-32 144.4 320 39.1
MELO3C019688.2 Cucumis melo HOM05D006785 ORTHO05D006259 4.2e-32 142.9 316 37.7
AT1G06530 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 5.4e-32 142.5 329 34.7
MD17G1139500 Malus domestica HOM05D006785 ORTHO05D006259 1.2e-31 141.4 243 44.0
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.6e-31 141.0 346 36.4
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.6e-31 141.0 346 36.4
Sed0007746 Sechium edule HOM05D006785 ORTHO05D006259 3.5e-31 139.8 329 36.5
Haze_13495 Corylus avellana HOM05D006785 ORTHO05D006259 1.0e-30 138.3 322 39.1
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.0e-30 138.3 314 38.5
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 5.1e-30 136.0 311 38.3
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 8.7e-30 135.2 321 36.1
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.5e-29 133.7 311 37.9
Lalb_Chr10g0106721 Lupinus albus HOM05D006785 ORTHO05D006259 4.3e-29 132.9 290 37.2
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 2.1e-28 130.6 320 36.6
Lalb_Chr17g0348301 Lupinus albus HOM05D006785 ORTHO05D006259 6.2e-28 129.0 290 37.6
Sabra02G0048700 Salix brachista HOM05D006785 ORTHO05D006259 1.8e-27 127.5 305 37.7
FAN02G2853 Fragaria x ananassa HOM05D006785 ORTHO05D006259 5.3e-27 125.9 329 36.5
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 6.9e-27 125.6 361 33.5
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 9.0e-27 125.2 327 34.3
Sp4g24990 Schrenkiella parvula HOM05D006785 ORTHO05D006259 1.2e-26 124.8 325 33.5
FAN14G2666 Fragaria x ananassa HOM05D006785 ORTHO05D006259 1.7e-25 120.9 329 36.2
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 1.7e-25 120.9 350 33.4
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 3.8e-25 119.8 329 34.0
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 1.4e-24 117.9 190 37.9
THA.LOC104802276 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 5.4e-24 115.9 327 34.9
CARHR006150 Cardamine hirsuta HOM05D006785 ORTHO05D006259 7.1e-24 115.5 210 39.0
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 1.2e-23 114.8 308 37.3
Prupe.3G172600 Prunus persica HOM05D006785 ORTHO05D006259 1.6e-23 114.4 309 37.2
Thhalv10006112m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 3.5e-23 113.2 233 39.5
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 6.0e-23 112.5 340 33.5
Atru.chr6.2094 Acer truncatum HOM05D006785 ORTHO05D006259 7.9e-23 112.1 315 32.7
BraA05t19307Z Brassica rapa HOM05D006785 ORTHO05D006259 1.7e-22 110.9 238 37.8
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 1.7e-22 110.9 306 34.0
C04p03820 Brassica napus HOM05D006785 ORTHO05D006259 3.0e-22 110.2 236 37.3
Glyma.02G287000 Glycine max HOM05D006785 ORTHO05D006259 5.1e-22 109.4 329 35.3
arahy.Tifrunner.gnm1.ann1.PX2Y9B Arachis hypogaea HOM05D006785 ORTHO05D006259 1.1e-21 108.2 295 32.5
RcHm_v2.0_Chr2g0151481 Rosa chinensis HOM05D006785 ORTHO05D006259 1.5e-21 107.8 309 35.6
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.9e-21 107.5 174 46.0
BolC4t22018H Brassica oleracea HOM05D006785 ORTHO05D006259 2.5e-21 107.1 236 36.9
Glyma.14G027900 Glycine max HOM05D006785 ORTHO05D006259 2.5e-21 107.1 321 33.0
Phvul.008G191300 Phaseolus vulgaris HOM05D006785 ORTHO05D006259 2.5e-21 107.1 329 35.9
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.3e-21 106.7 174 46.0
Carub.0005s2562 Capsella rubella HOM05D006785 ORTHO05D006259 5.6e-21 105.9 319 32.3
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 9.6e-21 105.1 174 45.4
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 1.8e-19 100.9 265 34.3
Thhalv10009835m.g Eutrema salsugineum HOM05D006785 ORTHO05D006259 2.6e-18 97.1 334 31.1
Ca_06284_v3 Cicer arietinum L. HOM05D006785 ORTHO05D006259 2.2e-17 94.0 326 33.4
Potri.002G060200 Populus trichocarpa HOM05D006785 ORTHO05D006259 3.8e-17 93.2 304 32.9
arahy.Tifrunner.gnm1.ann1.SE4LXZ Arachis hypogaea HOM05D006785 ORTHO05D006259 4.9e-17 92.8 233 33.9
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 4.9e-17 92.8 310 34.2
Ciclev10032336m.g Citrus clementina HOM05D006785 ORTHO05D006259 1.1e-16 91.7 322 32.0
arahy.Tifrunner.gnm1.ann1.W4MS3F Arachis hypogaea HOM05D006785 ORTHO05D006259 2.4e-16 90.5 301 30.9
Lalb_Chr05g0211951 Lupinus albus HOM05D006785 ORTHO05D006259 4.2e-16 89.7 201 36.8
AT3G58840 Arabidopsis thaliana HOM05D006785 ORTHO05D006259 7.1e-16 89.0 229 33.6
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 1.6e-15 87.8 323 30.7
Gohir.A11G224802 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.1e-15 87.4 302 34.4
LjContig00310g0014416 Lotus japonicus HOM05D006785 ORTHO05D006259 2.7e-15 87.0 333 29.4
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 3.5e-15 86.7 360 29.7
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 3.5e-15 86.7 295 26.8
TPR.G12660 Trifolium pratense HOM05D006785 ORTHO05D006259 1.0e-14 85.1 290 31.0
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 1.3e-14 84.7 140 41.4
Psat2g015800 Pisum sativum HOM05D006785 ORTHO05D006259 3.0e-14 83.6 310 29.7
CARHR169250 Cardamine hirsuta HOM05D006785 ORTHO05D006259 5.1e-14 82.8 152 37.5
Duzib147G0591 Durio zibethinus HOM05D006785 ORTHO05D006259 1.1e-13 81.6 311 35.7
Medtr5g091710 Medicago truncatula HOM05D006785 ORTHO05D006259 1.5e-13 81.3 322 29.5
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 2.5e-13 80.5 259 30.5
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 5.6e-13 79.3 335 28.1
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 7.4e-13 79.0 132 39.4
Aa31LG10G13400 Aethionema arabicum HOM05D006785 ORTHO05D006259 3.7e-12 76.6 297 30.6
AL1G16560 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 4.8e-12 76.3 329 27.1
Aa31LG1G7630 Aethionema arabicum HOM05D006785 ORTHO05D006259 8.1e-12 75.5 151 35.1
C05p04790 Brassica napus HOM05D006785 ORTHO05D006259 3.1e-11 73.6 174 31.0
BraA10t42785Z Brassica rapa HOM05D006785 ORTHO05D006259 1.5e-10 71.2 111 37.8
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 1.5e-10 71.2 351 31.1
ATR0568G074 Amborella trichopoda HOM05D006785 ORTHO05D006259 2.6e-10 70.5 319 30.1
PSO104G0025 Papaver somniferum HOM05D006785 ORTHO05D006259 2.6e-10 70.5 104 40.4
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 3.4e-10 70.1 141 37.6
BcaB02g07495 Brassica carinata HOM05D006785 ORTHO05D006259 4.5e-10 69.7 300 27.7
BcaB02g06783 Brassica carinata HOM05D006785 ORTHO05D006259 7.6e-10 68.9 240 29.6
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 1.7e-09 67.8 231 34.2
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 2.9e-09 67.0 160 36.9
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 2.9e-09 67.0 138 34.1
TPR.G15576 Trifolium pratense HOM05D021759 ORTHO05D020454 3.8e-09 66.6 196 33.2
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 1.1e-08 65.1 318 31.4
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 3.2e-08 63.5 319 27.3
A07p24380 Brassica napus HOM05D006785 ORTHO05D006259 1.2e-07 61.6 232 29.7
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 3.5e-07 60.1 317 26.5
Phvul.006G033700 Phaseolus vulgaris HOM05D067041 ORTHO05D020454 3.5e-07 60.1 185 29.7
TPR.G28029 Trifolium pratense HOM05D021759 ORTHO05D020454 4.6e-07 59.7 96 47.9
AL5G40640 Arabidopsis lyrata HOM05D006785 ORTHO05D006259 6.0e-07 59.3 102 34.3
Sp1g05290 Schrenkiella parvula HOM05D006785 ORTHO05D006259 6.0e-07 59.3 203 28.6
Duzib187G1417 Durio zibethinus HOM05D006785 ORTHO05D006259 1.3e-06 58.2 130 42.3
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 1.8e-06 57.8 312 29.8
Sp5g04020 Schrenkiella parvula HOM05D006785 ORTHO05D006259 2.3e-06 57.4 150 33.3
Aqoxy4G00148 Aquilegia oxysepala HOM05D006785 ORTHO05D006259 3.9e-06 56.6 277 29.6
BolC5t29251H Brassica oleracea HOM05D006785 ORTHO05D006259 5.1e-06 56.2 94 33.0
CDE07G0721 Ceratophyllum demersum HOM05D050733 ORTHO05D006259 5.1e-06 56.2 84 44.0
BraA07t30085Z Brassica rapa HOM05D006785 ORTHO05D023842 8.7e-06 55.5 233 30.0
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 8.7e-06 55.5 163 36.2


User provided reference genes

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