Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 0.0e+00 1240.3 666 100.0
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 2.7e-262 908.7 668 72.6
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 3.6e-259 898.3 668 71.7
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 2.1e-254 882.5 668 71.6
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 4.1e-247 858.2 664 70.2
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 3.5e-246 855.1 673 70.0
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 3.0e-245 852.0 668 69.5
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 1.1e-244 850.1 668 69.2
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 2.5e-244 849.0 671 68.1
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 2.8e-243 845.5 659 65.9
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 2.9e-240 835.5 664 69.7
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 4.9e-240 834.7 659 66.5
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 1.6e-235 819.7 667 68.7
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 6.9e-234 814.3 661 66.4
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 3.8e-232 808.5 664 65.1
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 1.1e-231 807.0 678 65.9
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 1.3e-229 800.0 659 63.3
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.6e-227 793.1 587 72.1
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 4.8e-227 791.6 677 68.2
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 6.2e-227 791.2 680 64.7
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 1.4e-226 790.0 673 67.0
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 9.0e-226 787.3 659 64.9
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 6.4e-224 781.2 666 63.7
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 1.1e-223 780.4 691 61.6
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 2.4e-223 779.2 602 69.3
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 5.5e-223 778.1 659 63.0
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 5.5e-223 778.1 674 63.2
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 2.3e-221 772.7 582 69.4
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 1.9e-220 769.6 582 68.6
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 2.5e-220 769.2 659 62.2
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 4.3e-220 768.5 581 70.2
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 9.6e-220 767.3 658 64.1
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 1.6e-219 766.5 581 69.0
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 8.1e-219 764.2 673 63.0
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 8.1e-219 764.2 664 63.6
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 2.4e-218 762.7 672 64.1
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 3.1e-218 762.3 670 62.2
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 9.0e-218 760.8 586 67.7
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 2.0e-217 759.6 653 62.8
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 2.6e-217 759.2 659 63.3
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 3.4e-217 758.8 669 62.9
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 1.3e-216 756.9 585 66.7
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 3.8e-216 755.4 670 63.4
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 3.8e-216 755.4 664 61.9
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 4.9e-216 755.0 581 68.3
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 8.4e-216 754.2 669 62.9
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 2.5e-215 752.7 581 66.6
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 4.2e-215 751.9 669 62.6
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 5.1e-213 745.0 596 66.9
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 9.6e-212 740.7 653 64.5
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 9.6e-212 740.7 551 71.1
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 2.8e-211 739.2 653 60.5
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 3.1e-210 735.7 677 60.0
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 5.3e-210 734.9 668 62.1
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 9.0e-210 734.2 661 61.9
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 1.2e-209 733.8 672 59.8
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 2.6e-209 732.6 676 60.4
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 3.8e-208 728.8 612 63.7
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 1.4e-207 726.9 676 60.1
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 4.2e-207 725.3 676 59.3
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 4.6e-206 721.8 676 60.1
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 1.3e-203 713.8 678 59.3
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 2.2e-203 713.0 615 64.7
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 3.7e-203 712.2 665 61.1
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 2.0e-201 706.4 664 61.9
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 9.4e-199 697.6 581 65.9
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 1.2e-198 697.2 685 58.5
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 2.1e-198 696.4 597 62.5
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 1.0e-197 694.1 670 59.6
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.4e-197 693.7 587 60.8
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 3.0e-197 692.6 665 60.2
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 6.7e-197 691.4 594 63.3
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 6.7e-197 691.4 693 55.7
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.1e-194 682.6 676 60.5
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 5.3e-194 681.8 595 64.0
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 1.5e-193 680.2 592 64.7
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 1.7e-192 676.8 538 66.7
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 8.5e-192 674.5 612 59.2
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 1.1e-191 674.1 535 66.7
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 1.9e-191 673.3 563 66.4
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 5.2e-189 665.2 646 60.5
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 7.7e-185 651.4 462 72.7
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 2.2e-184 649.8 474 68.4
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 1.5e-183 647.1 608 62.3
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 1.5e-183 647.1 622 60.1
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.8e-181 640.2 671 54.8
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 1.8e-181 640.2 658 53.8
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 1.2e-180 637.5 614 56.4
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 1.5e-180 637.1 585 60.7
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 4.5e-177 625.5 586 58.9
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 5.9e-177 625.2 619 56.4
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 3.8e-176 622.5 546 63.4
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 2.1e-174 616.7 483 67.3
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 7.7e-169 598.2 552 61.6
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 3.7e-163 579.3 664 49.2
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 2.7e-153 546.6 551 60.3
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 7.8e-153 545.0 570 55.8
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 2.4e-133 480.3 612 50.3
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 4.5e-108 396.4 286 66.4
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 2.9e-83 313.9 440 43.0
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 2.9e-83 313.9 440 43.0
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 1.8e-72 278.1 453 37.7
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 2.1e-57 228.0 427 34.7
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 2.7e-36 157.9 190 49.5
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.7e-35 155.2 143 56.6
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 1.1e-26 125.9 149 46.3
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 7.3e-26 123.2 195 43.1
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 5.4e-21 107.1 104 52.9
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 4.3e-18 97.4 207 30.0
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 3.8e-14 84.3 297 30.6
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 8.7e-11 73.2 133 34.6
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.1e-10 72.8 99 45.5
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 1.1e-10 72.8 50 58.0
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 1.5e-10 72.4 115 32.2
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 7.3e-10 70.1 85 38.8
VMungo0464G0544 Vigna mungo HOM05D006787 ORTHO05D008366 1.2e-09 69.3 104 37.5
VMungo0647G0587 Vigna mungo HOM05D006787 ORTHO05D008366 1.4e-08 65.9 104 33.7
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 4.0e-08 64.3 194 29.4


User provided reference genes

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