Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9602 Avicennia marina HOM05D001674 ORTHO05D008599 0.0e+00 3077.3 1662 100.0
Migut.D01672 Erythranthe guttata HOM05D001674 ORTHO05D008599 0.0e+00 1946.0 1690 66.7
SalBow7G3498 Salvia bowleyana HOM05D001674 ORTHO05D008599 0.0e+00 1882.8 1732 64.6
SGA_v2.0_scaffold3G01735 Striga asiatica HOM05D001674 ORTHO05D008599 0.0e+00 1701.4 1714 60.2
Oeu032213.1 Olea europaea HOM05D001674 ORTHO05D008599 0.0e+00 1647.5 1723 60.7
Cc00_g02250 Coffea canephora HOM05D001674 ORTHO05D008599 0.0e+00 1489.2 1760 54.5
Nitab4.5_0004511g0020 Nicotiana tabacum HOM05D001674 ORTHO05D008599 0.0e+00 1483.4 1673 57.9
QL10p018629 Quercus lobata HOM05D001674 ORTHO05D008599 0.0e+00 1471.4 1730 55.7
CAN.G479.33 Capsicum annuum HOM05D001674 ORTHO05D008599 0.0e+00 1468.0 1693 56.9
Sopen03g034510 Solanum pennellii HOM05D001674 ORTHO05D008599 0.0e+00 1458.0 1694 56.7
vmacro17586 Vaccinium macrocarpon HOM05D001674 ORTHO05D008599 0.0e+00 1451.8 1704 53.6
TAR629G0913 Trochodendron aralioides HOM05D001674 ORTHO05D008599 0.0e+00 1428.7 1766 53.5
Ciclev10018469m.g Citrus clementina HOM05D001674 ORTHO05D008599 0.0e+00 1425.2 1730 55.1
Hma1.2p1_0060F.1_g033350 Hydrangea macrophylla HOM05D001674 ORTHO05D008599 0.0e+00 1418.3 1697 55.6
Atru.chr9.280 Acer truncatum HOM05D001674 ORTHO05D008599 0.0e+00 1416.7 1730 54.4
Thecc.03G096700 Theobroma cacao HOM05D001674 ORTHO05D008599 0.0e+00 1412.9 1720 54.7
COL.COLO4_36885 Corchorus olitorius HOM05D001674 ORTHO05D008599 0.0e+00 1386.7 1715 53.9
Duzib068G0733 Durio zibethinus HOM05D001674 ORTHO05D008599 0.0e+00 1386.3 1730 54.4
Actinidia04849 Actinidia chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1383.2 1424 61.0
Gorai.007G039000 Gossypium raimondii HOM05D001674 ORTHO05D008599 0.0e+00 1377.5 1721 53.5
GSVIVG01007917001 Vitis vinifera HOM05D001674 ORTHO05D008599 0.0e+00 1368.6 1649 52.2
Gohir.A11G032900 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1346.3 1726 53.2
Nn4g23353 Nelumbo nucifera HOM05D001674 ORTHO05D008599 0.0e+00 1337.4 1743 50.7
DCAR_031671 Daucus carota HOM05D001674 ORTHO05D008599 0.0e+00 1331.6 1723 51.0
Glyma.17G076400 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1327.4 1720 51.6
CANSAT80G0851 Cannabis sativa HOM05D001674 ORTHO05D008599 0.0e+00 1326.2 1724 52.0
PGR083G0537 Punica granatum HOM05D001674 ORTHO05D008599 0.0e+00 1325.1 1721 49.6
TWI15G1152 Tripterygium wilfordii HOM05D001674 ORTHO05D008599 0.0e+00 1321.2 1706 53.0
Prupe.5G200400 Prunus persica HOM05D001674 ORTHO05D008599 0.0e+00 1313.5 1719 51.9
arahy.Tifrunner.gnm1.ann1.MMN4BF Arachis hypogaea HOM05D001674 ORTHO05D008599 0.0e+00 1312.4 1730 51.5
Manes.06G087600 Manihot esculenta HOM05D001674 ORTHO05D008599 0.0e+00 1312.4 1814 50.7
Glyma.05G023300 Glycine max HOM05D001674 ORTHO05D008599 0.0e+00 1307.7 1736 51.0
MELO3C017205.2 Cucumis melo HOM05D001674 ORTHO05D008599 0.0e+00 1304.7 1736 50.7
Sed0027646 Sechium edule HOM05D001674 ORTHO05D008599 0.0e+00 1303.1 1737 50.7
VMungo1215G3312 Vigna mungo HOM05D001674 ORTHO05D008599 0.0e+00 1299.6 1732 51.0
ECA247G0462 Erigeron canadensis HOM05D001674 ORTHO05D008599 0.0e+00 1298.5 1657 51.4
CsaV3_1G002700 Cucumis sativus L. HOM05D001674 ORTHO05D008599 0.0e+00 1298.1 1745 50.7
HanXRQChr04g0107361 Helianthus annuus HOM05D001674 ORTHO05D008599 0.0e+00 1297.3 1659 50.7
Medtr4g109230 Medicago truncatula HOM05D001674 ORTHO05D008599 0.0e+00 1294.6 1704 51.3
TPR.G2046 Trifolium pratense HOM05D001674 ORTHO05D008599 0.0e+00 1294.6 1724 51.3
ClCG06G015860 Citrullus lanatus HOM05D001674 ORTHO05D008599 0.0e+00 1291.9 1751 50.8
Lj4g0011824 Lotus japonicus HOM05D001674 ORTHO05D008599 0.0e+00 1287.3 1724 51.6
Phvul.003G186700 Phaseolus vulgaris HOM05D001674 ORTHO05D008599 0.0e+00 1285.8 1727 51.4
Sabra12G0048200 Salix brachista HOM05D001674 ORTHO05D008599 0.0e+00 1285.8 1933 46.7
Aqoxy3G00452 Aquilegia oxysepala HOM05D001674 ORTHO05D008599 0.0e+00 1284.6 1740 49.5
Lalb_Chr13g0302981 Lupinus albus HOM05D001674 ORTHO05D008599 0.0e+00 1279.2 1715 50.6
Psat4g048680 Pisum sativum HOM05D001674 ORTHO05D008599 0.0e+00 1266.1 1690 51.2
RcHm_v2.0_Chr7g0182421 Rosa chinensis HOM05D001674 ORTHO05D008599 0.0e+00 1251.9 1741 49.7
Ca_21793_v3 Cicer arietinum L. HOM05D001674 ORTHO05D008599 0.0e+00 1250.7 1691 51.4
FAN18G2329 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1250.0 1728 50.3
FvH4_5g14340 Fragaria vesca HOM05D001674 ORTHO05D008599 0.0e+00 1248.4 1728 50.3
FAN13G3105 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1248.4 1728 50.3
AUR62021608 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1244.6 1741 49.6
FAN08G0876 Fragaria x ananassa HOM05D001674 ORTHO05D008599 0.0e+00 1241.9 1723 50.0
Lsat_1_v5_gn_1_13760 Lactuca sativa HOM05D001674 ORTHO05D008599 0.0e+00 1239.9 1648 50.7
Peaxi162Scf00201g00021 Petunia axillaris HOM05D001674 ORTHO05D008599 0.0e+00 1238.8 1221 63.8
AUR62008489 Chenopodium quinoa HOM05D001674 ORTHO05D008599 0.0e+00 1229.2 1760 49.1
Solyc03g115510.3 Solanum lycopersicum HOM05D001674 ORTHO05D008599 0.0e+00 1228.0 1221 63.4
PSO478G4640 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1221.1 1789 47.8
PGSC0003DMG400024553 Solanum tuberosum HOM05D001674 ORTHO05D008599 0.0e+00 1214.9 1464 56.1
Eucgr.B00566 Eucalyptus grandis HOM05D001674 ORTHO05D008599 0.0e+00 1213.4 1515 53.6
Potri.012G066900 Populus trichocarpa HOM05D001674 ORTHO05D008599 0.0e+00 1209.1 1616 50.6
Hund02613 Selenicereus undatus HOM05D001674 ORTHO05D008599 0.0e+00 1208.4 1714 48.7
Haze_07676 Corylus avellana HOM05D001674 ORTHO05D008599 0.0e+00 1207.6 1508 54.3
Rhsim08G0149500 Rhododendron simsii HOM05D001674 ORTHO05D008599 0.0e+00 1201.0 1478 52.2
PSO017G4474 Papaver somniferum HOM05D001674 ORTHO05D008599 0.0e+00 1187.9 1791 47.8
ATR0064G082 Amborella trichopoda HOM05D001674 ORTHO05D008599 0.0e+00 1161.4 1411 54.6
Gohir.D11G036200 Gossypium hirsutum HOM05D001674 ORTHO05D008599 0.0e+00 1139.0 1191 59.5
Cpa.g.sc94.3 Carica papaya HOM05D001674 ORTHO05D008599 0.0e+00 1104.7 1239 58.4
CiPaw.11G049600 Carya illinoinensis HOM05D001674 ORTHO05D008599 0.0e+00 1092.4 1313 56.7
Sc12g0006570 Simmondsia chinensis HOM05D001674 ORTHO05D008599 5.2e-307 1058.5 1326 54.3
Dinv10682 Davidia involucrata HOM05D001674 ORTHO05D008599 6.0e-303 1045.0 954 63.0
Lj5A106T70 Lonicera japonica HOM05D001674 ORTHO05D008599 8.6e-302 1041.2 1248 54.9
Nitab4.5_0020510g0010 Nicotiana tabacum HOM05D001674 ORTHO05D008599 9.6e-293 1011.1 1002 65.5
unitig_37.g12722 Utricularia gibba HOM05D001674 ORTHO05D008599 1.2e-292 1010.7 1121 55.8
SEGI_10628 Sequoiadendron giganteum HOM05D001674 ORTHO05D008599 2.7e-287 993.0 1715 43.4
Zm00001eb108430 Zea mays HOM05D001674 ORTHO05D008599 3.3e-277 959.5 1480 46.7
Actinidia09243 Actinidia chinensis HOM05D001674 ORTHO05D008599 9.9e-274 948.0 946 60.8
MD14G1208500 Malus domestica HOM05D001674 ORTHO05D008599 1.5e-266 924.1 1235 52.3
Dinv38777 Davidia involucrata HOM05D001674 ORTHO05D008599 5.3e-251 872.5 827 60.9
Ah.02g113890 Amaranthus hybridus HOM05D001674 ORTHO05D008599 6.7e-246 855.5 1453 44.6
Pp3c11_9170 Physcomitrium patens HOM05D001674 ORTHO05D008599 7.7e-234 815.5 1382 44.3
SMO117G0045 Selaginella moellendorffii HOM05D001674 ORTHO05D008599 2.2e-220 770.8 1293 45.6
Os06g0235300 Oryza sativa ssp. japonica HOM05D001674 ORTHO05D008599 3.4e-165 587.4 726 55.8
AagrBONN_evm.TU.Sc2ySwM_228.3354 Anthoceros agrestis HOM05D001674 ORTHO05D008599 1.4e-150 538.9 866 42.4
Dinv10683 Davidia involucrata HOM05D001674 ORTHO05D008599 2.5e-144 518.1 717 49.8
CDE07G0766 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 6.1e-130 470.3 853 42.3
CDE07G0117 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.5e-125 455.7 522 53.1
Pp3c1_9760 Physcomitrium patens HOM05D001674 ORTHO05D008599 1.6e-117 429.1 1100 33.3
Actinidia09244 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.6e-114 419.1 732 43.2
Dinv38778 Davidia involucrata HOM05D001674 ORTHO05D008599 2.9e-87 328.6 717 39.2
Ah.02g113880 Amaranthus hybridus HOM05D001674 ORTHO05D008599 1.1e-73 283.5 257 56.4
Actinidia09199 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.5e-72 279.6 681 34.1
Lj5A106T69 Lonicera japonica HOM05D001674 ORTHO05D008599 5.2e-65 254.6 486 38.5
Nitab4.5_0002881g0120 Nicotiana tabacum HOM05D001674 ORTHO05D008599 3.6e-58 231.9 452 39.4
MD14G1208300 Malus domestica HOM05D001674 ORTHO05D008599 1.2e-56 226.9 244 52.5
Rhsim08G0149700 Rhododendron simsii HOM05D001674 ORTHO05D008599 4.4e-56 224.9 229 53.3
unitig_37.g12721 Utricularia gibba HOM05D001674 ORTHO05D008599 2.5e-51 209.1 193 58.5
CDE07G0655 Ceratophyllum demersum HOM05D001674 ORTHO05D008599 1.2e-37 163.7 171 53.8
PRCOL_00000483 Prasinoderma coloniale HOM05D001674 ORTHO05D008599 1.8e-36 159.8 1332 23.3
Cpa.g.sc94.4 Carica papaya HOM05D001674 ORTHO05D008599 8.7e-36 157.5 136 62.5
Actinidia09209 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.5e-32 146.7 166 50.6
CBR_g23198 Chara braunii HOM05D000019 ORTHO05D000048 3.0e-28 132.5 282 35.5
unitig_37.g12720 Utricularia gibba HOM05D001674 ORTHO05D008599 2.2e-26 126.3 248 37.1
MCO15G104 Micromonas commoda HOM05D001674 ORTHO05D008599 2.8e-26 125.9 223 36.8
Actinidia09203 Actinidia chinensis HOM05D001674 ORTHO05D008599 4.5e-24 118.6 117 59.0
Actinidia09211 Actinidia chinensis HOM05D001674 ORTHO05D008599 1.3e-23 117.1 278 35.6
PGSC0003DMG400006818 Solanum tuberosum HOM05D001674 ORTHO05D008599 2.2e-23 116.3 160 45.6
Cre16.g679400 Chlamydomonas reinhardtii HOM05D001674 ORTHO05D008599 7.9e-21 107.8 274 29.2
CBR_g23193 Chara braunii HOM05D000019 ORTHO05D000048 6.7e-20 104.8 106 56.6
TAR376G0971 Trochodendron aralioides HOM05D001674 ORTHO05D008599 8.2e-18 97.8 113 46.9
Actinidia09202 Actinidia chinensis HOM05D001674 ORTHO05D008599 2.4e-17 96.3 87 59.8
CBR_g23210 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-13 82.4 75 46.7
CBR_g23187 Chara braunii HOM05D001674 ORTHO05D000353 4.6e-13 82.0 75 57.3
Psat3g111480 Pisum sativum HOM05D001026 ORTHO05D008599 1.4e-12 80.5 63 60.3


User provided reference genes

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