Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 6.4e-151 537.3 265 100.0
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 1.2e-107 393.7 265 74.7
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 5.5e-94 348.2 263 65.8
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 7.8e-88 327.8 271 64.9
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 5.8e-83 311.6 260 60.4
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 7.5e-83 311.2 260 60.0
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 5.4e-81 305.1 258 58.9
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 3.5e-80 302.4 259 57.5
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 4.6e-80 302.0 260 59.2
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 6.0e-80 301.6 261 57.5
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.3e-79 300.4 260 58.5
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 1.7e-79 300.1 263 58.2
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 2.3e-79 299.7 261 57.9
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.3e-79 299.7 260 58.5
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 3.0e-79 299.3 258 55.8
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 3.0e-79 299.3 260 58.1
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 3.0e-79 299.3 260 58.1
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 5.0e-79 298.5 257 58.0
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 5.0e-79 298.5 263 57.8
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.9e-78 296.6 260 58.5
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.9e-78 296.6 260 58.5
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 2.5e-78 296.2 263 57.0
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 4.3e-78 295.4 259 57.1
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 5.6e-78 295.0 261 57.1
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 7.3e-78 294.7 258 56.2
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 7.3e-78 294.7 239 59.8
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 9.5e-78 294.3 265 57.4
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 1.2e-77 293.9 239 61.1
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 2.1e-77 293.1 259 59.1
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 4.7e-77 292.0 263 56.3
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 4.7e-77 292.0 259 57.9
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 6.2e-77 291.6 263 55.9
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 6.2e-77 291.6 263 54.8
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 8.0e-77 291.2 239 58.2
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 1.4e-76 290.4 259 57.5
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 1.4e-76 290.4 242 59.5
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 1.8e-76 290.0 259 58.3
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 2.3e-76 289.7 263 57.0
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 3.1e-76 289.3 257 55.6
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 6.8e-76 288.1 263 56.7
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 2.0e-75 286.6 239 59.8
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 2.0e-75 286.6 239 58.6
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 3.4e-75 285.8 259 59.5
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 5.8e-75 285.0 260 54.2
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 7.5e-75 284.6 259 56.8
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 2.9e-74 282.7 267 54.3
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 3.7e-74 282.3 258 55.0
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 3.7e-74 282.3 260 56.2
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 3.7e-74 282.3 258 56.6
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 4.9e-74 282.0 265 52.8
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 6.4e-74 281.6 227 62.1
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 8.3e-74 281.2 262 54.2
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 1.1e-73 280.8 260 55.4
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 1.1e-73 280.8 255 52.5
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 1.4e-73 280.4 262 56.1
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 1.9e-73 280.0 315 47.6
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 4.1e-73 278.9 262 54.6
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 3.5e-72 275.8 260 53.5
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 3.5e-72 275.8 261 54.8
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 4.6e-72 275.4 260 52.7
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 6.0e-72 275.0 258 53.1
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 6.0e-72 275.0 260 55.0
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 1.0e-71 274.2 260 53.8
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 1.7e-71 273.5 269 52.4
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 1.7e-71 273.5 261 53.6
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 2.3e-71 273.1 260 53.1
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 2.3e-71 273.1 260 52.7
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 8.6e-71 271.2 260 52.7
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 1.5e-70 270.4 258 52.3
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 1.5e-70 270.4 258 54.3
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 1.5e-70 270.4 258 54.3
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 1.5e-70 270.4 258 54.3
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 1.5e-70 270.4 257 52.1
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 1.5e-70 270.4 260 54.2
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 3.3e-70 269.2 258 53.5
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 3.3e-70 269.2 260 54.2
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 4.3e-70 268.9 264 53.0
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 4.3e-70 268.9 265 52.5
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 2.1e-69 266.5 261 52.5
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 2.1e-69 266.5 259 52.1
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 6.2e-69 265.0 262 51.5
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 2.0e-67 260.0 258 50.4
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 1.9e-65 253.4 229 58.1
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 4.1e-65 252.3 256 48.4
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 4.1e-65 252.3 219 58.4
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 9.2e-65 251.1 279 49.1
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 1.2e-64 250.8 235 50.2
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 6.0e-64 248.4 259 49.4
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 1.0e-63 247.7 218 58.7
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 6.6e-63 245.0 225 54.2
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 1.9e-62 243.4 234 52.6
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 2.1e-61 240.0 226 56.2
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 3.6e-61 239.2 256 44.9
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 1.5e-59 233.8 248 48.8
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 2.0e-59 233.4 234 52.1
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 4.8e-53 212.2 258 46.5
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 6.2e-53 211.8 188 55.3
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 8.1e-53 211.5 260 43.8
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 3.1e-52 209.5 156 66.0
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 4.4e-51 205.7 165 62.4
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.2e-48 197.6 165 58.8
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 6.6e-47 191.8 251 44.2
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 3.4e-43 179.5 181 51.4
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.3e-42 177.6 153 58.8
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 5.1e-39 165.6 124 66.1
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 1.6e-37 160.6 281 35.6
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 2.0e-35 153.7 159 45.3
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 5.8e-35 152.1 156 45.5
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 5.8e-35 152.1 156 45.5
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 5.8e-35 152.1 156 45.5
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 1.1e-33 147.9 273 36.3
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 1.6e-32 144.1 145 49.0
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 1.5e-30 137.5 206 38.8
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 8.4e-26 121.7 110 52.7
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 8.4e-26 121.7 118 45.8
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 3.5e-24 116.3 114 52.6
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.0e-23 114.8 162 45.7
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 1.0e-23 114.8 167 41.9
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 1.6e-21 107.5 95 52.6
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 2.0e-19 100.5 95 50.5
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.9e-17 94.0 77 61.0
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 9.4e-17 91.7 95 48.4
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 2.7e-16 90.1 158 40.5
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 2.7e-16 90.1 74 58.1
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 8.8e-15 85.1 74 55.4
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 2.8e-13 80.1 59 57.6
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 8.2e-13 78.6 95 43.2
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 6.9e-12 75.5 67 52.2
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 1.1e-09 68.2 48 64.6


User provided reference genes

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