Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7589 Avicennia marina HOM05D000604 ORTHO05D004856 1.5e-56 222.6 113 100.0
MSTRG.7607 Avicennia marina HOM05D000604 ORTHO05D004856 1.0e-28 130.2 82 85.4
Nitab4.5_0000844g0350 Nicotiana tabacum HOM05D000604 ORTHO05D004856 9.5e-27 123.6 81 79.0
Dinv05871 Davidia involucrata HOM05D000604 ORTHO05D004856 1.6e-26 122.9 83 77.1
Peaxi162Scf00036g01624 Petunia axillaris HOM05D000604 ORTHO05D004856 8.0e-26 120.6 81 76.5
Actinidia13225 Actinidia chinensis HOM05D000604 ORTHO05D004856 2.3e-25 119.0 89 73.0
Duzib235G1121 Durio zibethinus HOM05D000604 ORTHO05D004856 3.0e-25 118.6 82 74.4
Solyc02g081940.3 Solanum lycopersicum HOM05D000604 ORTHO05D004856 3.0e-25 118.6 81 75.3
Sopen02g026570 Solanum pennellii HOM05D000604 ORTHO05D004856 3.0e-25 118.6 81 75.3
PGSC0003DMG400007320 Solanum tuberosum HOM05D000604 ORTHO05D004856 3.0e-25 118.6 81 75.3
Cc09_g04940 Coffea canephora HOM05D000604 ORTHO05D004856 4.0e-25 118.2 84 72.6
Migut.B01297 Erythranthe guttata HOM05D000604 ORTHO05D004856 5.2e-25 117.9 82 76.8
COL.COLO4_30935 Corchorus olitorius HOM05D000604 ORTHO05D004856 6.8e-25 117.5 87 69.0
Lj2A328T81 Lonicera japonica HOM05D000604 ORTHO05D004856 8.9e-25 117.1 76 80.3
PSO017G6514 Papaver somniferum HOM05D000604 ORTHO05D004856 1.5e-24 116.3 86 69.8
PSO724G1052 Papaver somniferum HOM05D000604 ORTHO05D004856 1.5e-24 116.3 86 69.8
Thecc.06G136200 Theobroma cacao HOM05D000604 ORTHO05D004856 2.0e-24 115.9 77 77.9
CiPaw.04G077700 Carya illinoinensis HOM05D000604 ORTHO05D004856 2.6e-24 115.5 83 71.1
unitig_37.g13055 Utricularia gibba HOM05D000604 ORTHO05D004856 2.6e-24 115.5 88 68.2
PSO063G6978 Papaver somniferum HOM05D000604 ORTHO05D004856 3.4e-24 115.2 86 68.6
Hma1.2p1_0589F.1_g184700 Hydrangea macrophylla HOM05D000604 ORTHO05D004856 4.4e-24 114.8 83 72.3
Manes.13G073400 Manihot esculenta HOM05D000604 ORTHO05D004856 5.7e-24 114.4 77 76.6
MELO3C016321.2 Cucumis melo HOM05D000604 ORTHO05D004856 7.5e-24 114.0 77 74.0
Gohir.D10G047700 Gossypium hirsutum HOM05D000604 ORTHO05D004856 7.5e-24 114.0 77 75.3
Gorai.011G050800 Gossypium raimondii HOM05D000604 ORTHO05D004856 7.5e-24 114.0 77 75.3
CsaV3_4G006300 Cucumis sativus L. HOM05D000604 ORTHO05D004856 9.8e-24 113.6 77 74.0
PSO135G0531 Papaver somniferum HOM05D000604 ORTHO05D004856 9.8e-24 113.6 86 67.4
SalBow8G1358 Salvia bowleyana HOM05D000604 ORTHO05D004856 9.8e-24 113.6 81 75.3
Cfa008710 Carpinus fangiana HOM05D000604 ORTHO05D004856 1.7e-23 112.8 83 69.9
Migut.M00474 Erythranthe guttata HOM05D000604 ORTHO05D004856 1.7e-23 112.8 76 78.9
Migut.M00477 Erythranthe guttata HOM05D000604 ORTHO05D004856 1.7e-23 112.8 76 78.9
Prupe.4G106000 Prunus persica HOM05D000604 ORTHO05D004856 1.7e-23 112.8 81 72.8
Sed0014227 Sechium edule HOM05D000604 ORTHO05D004856 1.7e-23 112.8 77 74.0
ClCG07G014770 Citrullus lanatus HOM05D000604 ORTHO05D004856 2.2e-23 112.5 77 74.0
Haze_11719 Corylus avellana HOM05D000604 ORTHO05D004856 2.2e-23 112.5 83 68.7
Gohir.A10G046400 Gossypium hirsutum HOM05D000604 ORTHO05D004856 2.9e-23 112.1 77 74.0
Phvul.001G070900 Phaseolus vulgaris HOM05D000604 ORTHO05D004856 3.7e-23 111.7 77 72.7
MD10G1238300 Malus domestica HOM05D000604 ORTHO05D004856 6.4e-23 110.9 81 69.1
CDE05G3452 Ceratophyllum demersum HOM05D000604 ORTHO05D004856 8.3e-23 110.5 82 68.3
Migut.M00563 Erythranthe guttata HOM05D000604 ORTHO05D004856 8.3e-23 110.5 76 77.6
Aqoxy5G00580 Aquilegia oxysepala HOM05D000604 ORTHO05D004856 1.1e-22 110.2 80 71.2
Ciclev10017571m.g Citrus clementina HOM05D000604 ORTHO05D004856 1.1e-22 110.2 81 70.4
Glyma.13G032300 Glycine max HOM05D000604 ORTHO05D004856 1.1e-22 110.2 77 74.0
PGR119G0174 Punica granatum HOM05D000604 ORTHO05D004856 1.1e-22 110.2 84 66.7
TWI73G0328 Tripterygium wilfordii HOM05D000604 ORTHO05D004856 1.1e-22 110.2 76 75.0
Cpa.g.sc192.5 Carica papaya HOM05D000604 ORTHO05D004856 1.4e-22 109.8 77 74.0
Migut.O00375 Erythranthe guttata HOM05D000604 ORTHO05D004856 1.8e-22 109.4 76 76.3
Lj1g0003644 Lotus japonicus HOM05D001476 ORTHO05D004856 1.8e-22 109.4 86 66.3
Glyma.14G154500 Glycine max HOM05D000604 ORTHO05D004856 3.2e-22 108.6 105 59.0
Eucgr.K02063 Eucalyptus grandis HOM05D000604 ORTHO05D004856 4.1e-22 108.2 83 68.7
GSVIVG01012163001 Vitis vinifera HOM05D000604 ORTHO05D004856 4.1e-22 108.2 80 68.8
Oeu014816.1 Olea europaea HOM05D000604 ORTHO05D004856 5.4e-22 107.8 78 73.1
QL06p028587 Quercus lobata HOM05D000604 ORTHO05D004856 5.4e-22 107.8 77 72.7
Hund20696 Selenicereus undatus HOM05D000604 ORTHO05D004856 5.4e-22 107.8 96 60.4
Lalb_Chr19g0132151 Lupinus albus HOM05D000604 ORTHO05D004856 9.2e-22 107.1 88 65.9
Nitab4.5_0000632g0160 Nicotiana tabacum HOM05D000604 ORTHO05D004856 9.2e-22 107.1 113 56.6
Atru.BG.155.p Acer truncatum HOM05D000604 ORTHO05D004856 1.6e-21 106.3 87 65.5
Medtr2g018390 Medicago truncatula HOM05D000604 ORTHO05D004856 1.6e-21 106.3 75 69.3
Sabra03G0108600 Salix brachista HOM05D000604 ORTHO05D004856 1.6e-21 106.3 83 67.5
TPR.G6171 Trifolium pratense HOM05D000604 ORTHO05D004856 1.6e-21 106.3 91 61.5
VMungo0647G0785 Vigna mungo HOM05D000604 ORTHO05D004856 2.0e-21 105.9 77 68.8
arahy.Tifrunner.gnm1.ann1.2H30NS Arachis hypogaea HOM05D000604 ORTHO05D004856 2.7e-21 105.5 77 68.8
arahy.Tifrunner.gnm1.ann1.GY8SZ4 Arachis hypogaea HOM05D000604 ORTHO05D004856 2.7e-21 105.5 77 68.8
CSS0014014 Camellia sinensis var. sinensis HOM05D000604 ORTHO05D004856 3.5e-21 105.1 68 79.4
DCAR_007039 Daucus carota HOM05D000604 ORTHO05D004856 3.5e-21 105.1 85 62.4
SHI01960 Sapria himalayana HOM05D000604 ORTHO05D004856 3.5e-21 105.1 77 68.8
Ca_08573_v3 Cicer arietinum L. HOM05D000604 ORTHO05D004856 5.9e-21 104.4 80 67.5
MBI18_g32818_MAGBIO Magnolia biondii HOM05D000604 ORTHO05D004856 5.9e-21 104.4 75 69.3
TAR371G0160 Trochodendron aralioides HOM05D000604 ORTHO05D004856 5.9e-21 104.4 73 72.6
Potri.003G149600 Populus trichocarpa HOM05D000604 ORTHO05D004856 1.7e-20 102.8 83 65.1
Ah.04g154050 Amaranthus hybridus HOM05D000604 ORTHO05D004856 3.0e-20 102.1 75 66.7
AL7G34450 Arabidopsis lyrata HOM05D000604 ORTHO05D004856 3.0e-20 102.1 77 66.2
HanXRQChr04g0119081 Helianthus annuus HOM05D000604 ORTHO05D004856 3.0e-20 102.1 75 69.3
Lsat_1_v5_gn_7_29360 Lactuca sativa HOM05D000604 ORTHO05D004856 3.0e-20 102.1 75 68.0
Lj1g0003482 Lotus japonicus HOM05D000604 ORTHO05D004856 3.0e-20 102.1 77 70.1
AUR62039584 Chenopodium quinoa HOM05D000604 ORTHO05D004856 3.9e-20 101.7 75 66.7
Carub.0007s2157 Capsella rubella HOM05D000604 ORTHO05D004856 6.6e-20 100.9 77 66.2
Sp7g18180 Schrenkiella parvula HOM05D000604 ORTHO05D004856 6.6e-20 100.9 77 64.9
Aa31LG6G2170 Aethionema arabicum HOM05D000604 ORTHO05D004856 8.6e-20 100.5 74 67.6
ATR0680G306 Amborella trichopoda HOM05D000604 ORTHO05D004856 8.6e-20 100.5 77 67.5
AUR62019648 Chenopodium quinoa HOM05D000604 ORTHO05D004856 8.6e-20 100.5 75 65.3
THA.LOC104806210 Tarenaya hassleriana HOM05D000604 ORTHO05D004856 8.6e-20 100.5 78 64.1
AT4G19610 Arabidopsis thaliana HOM05D000604 ORTHO05D004856 1.1e-19 100.1 77 64.9
Thhalv10024436m.g Eutrema salsugineum HOM05D000604 ORTHO05D004856 1.1e-19 100.1 77 64.9
ECA236G3264 Erigeron canadensis HOM05D000604 ORTHO05D004856 1.5e-19 99.8 75 68.0
BcaNung01771 Brassica carinata HOM05D000604 ORTHO05D004856 1.9e-19 99.4 77 64.9
AUR62026050 Chenopodium quinoa HOM05D000604 ORTHO05D004856 1.9e-19 99.4 77 62.3
Sc24g0002870 Simmondsia chinensis HOM05D000604 ORTHO05D004856 1.9e-19 99.4 87 55.2
Ah.10g032170 Amaranthus hybridus HOM05D000604 ORTHO05D004856 5.6e-19 97.8 78 61.5
AUR62006166 Chenopodium quinoa HOM05D000604 ORTHO05D004856 1.6e-18 96.3 77 61.0
AL6G15620 Arabidopsis lyrata HOM05D000604 ORTHO05D004856 2.1e-18 95.9 84 58.3
AL6G21620 Arabidopsis lyrata HOM05D000604 ORTHO05D004856 2.1e-18 95.9 77 59.7
EL10Ac6g13453 Beta vulgaris HOM05D000604 ORTHO05D004856 2.1e-18 95.9 81 59.3
BcaC09g51398 Brassica carinata HOM05D000604 ORTHO05D004856 2.1e-18 95.9 91 54.9
C01p13560 Brassica napus HOM05D000604 ORTHO05D004856 2.1e-18 95.9 91 54.9
BolC1t01328H Brassica oleracea HOM05D000604 ORTHO05D004856 2.1e-18 95.9 91 54.9
BraA01t01094Z Brassica rapa HOM05D000604 ORTHO05D004856 2.1e-18 95.9 91 54.9
A01p11470 Brassica napus HOM05D000604 ORTHO05D004856 3.6e-18 95.1 91 54.9
Zm00001eb430700 Zea mays HOM05D000604 ORTHO05D004856 6.2e-18 94.4 86 60.5
Zm00001eb442350 Zea mays HOM05D000604 ORTHO05D004856 6.2e-18 94.4 86 60.5
AT5G08695 Arabidopsis thaliana HOM05D000604 ORTHO05D004856 8.0e-18 94.0 77 58.4
Os04g0611500 Oryza sativa ssp. japonica HOM05D000604 ORTHO05D004856 1.8e-17 92.8 99 52.5
CANSAT56G2059 Cannabis sativa HOM05D000604 ORTHO05D004856 2.3e-17 92.4 81 56.8
FAN16G0408 Fragaria x ananassa HOM05D000604 ORTHO05D004856 3.1e-17 92.0 77 58.4
RcHm_v2.0_Chr5g0019271 Rosa chinensis HOM05D000604 ORTHO05D004856 3.1e-17 92.0 81 55.6
AagrBONN_evm.TU.Sc2ySwM_117.1847 Anthoceros agrestis HOM05D000604 ORTHO05D004856 5.2e-17 91.3 84 54.8
FvH4_3g11840 Fragaria vesca HOM05D000604 ORTHO05D004856 8.9e-17 90.5 77 57.1
Medtr7g094670 Medicago truncatula HOM05D001476 ORTHO05D002681 1.5e-16 89.7 92 54.3
Mapoly0030s0107 Marchantia polymorpha HOM05D000604 ORTHO05D004856 2.0e-16 89.4 75 57.3
Pp3c7_9260 Physcomitrium patens HOM05D000604 ORTHO05D004856 2.0e-16 89.4 99 46.5
FAN21G2591 Fragaria x ananassa HOM05D000604 ORTHO05D004856 2.6e-16 89.0 77 55.8
Medtr7g096260 Medicago truncatula HOM05D000604 ORTHO05D004856 4.4e-16 88.2 80 57.5
CARHR226400 Cardamine hirsuta HOM05D000604 ORTHO05D004856 5.8e-16 87.8 77 58.4
FAN25G0854 Fragaria x ananassa HOM05D000604 ORTHO05D004856 7.5e-16 87.4 79 54.4
Medtr7g094660 Medicago truncatula HOM05D000604 ORTHO05D004856 1.7e-15 86.3 80 57.5
CARHR207550 Cardamine hirsuta HOM05D000604 ORTHO05D004856 4.9e-15 84.7 84 54.8
SMO301G0078 Selaginella moellendorffii HOM05D000604 ORTHO05D004856 4.9e-15 84.7 71 54.9
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 8.3e-15 84.0 71 59.2
Migut.M00571 Erythranthe guttata HOM05D000604 ORTHO05D004856 1.4e-14 83.2 52 78.8
vmacro11016 Vaccinium macrocarpon HOM05D000604 ORTHO05D004856 4.6e-13 78.2 147 38.1
Rhsim02G0169700 Rhododendron simsii HOM05D000604 ORTHO05D004856 3.0e-12 75.5 152 36.2
EL10Ac2g02981 Beta vulgaris HOM05D000604 ORTHO05D004856 8.6e-12 73.9 129 38.0
MD05G1258600 Malus domestica HOM05D000604 ORTHO05D004856 1.9e-11 72.8 42 88.1
Ah.04g154070 Amaranthus hybridus HOM05D000604 ORTHO05D004856 5.6e-11 71.2 42 78.6
TAR626G0202 Trochodendron aralioides HOM05D000604 ORTHO05D004856 5.6e-11 71.2 43 81.4
Nn1g08459 Nelumbo nucifera HOM05D000604 ORTHO05D004856 6.8e-09 64.3 42 76.2
CANSAT35G1381 Cannabis sativa HOM05D000604 ORTHO05D004856 3.4e-08 62.0 49 57.1
MCO07G708 Micromonas commoda HOM05D000604 ORTHO05D004856 2.2e-07 59.3 68 47.1


User provided reference genes

Program Settings