Gene: Sopen02g026570

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g026570
  • Transcript Identifier Sopen02g026570.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 49465964-49473192 : positive

Gene Family Information

  • ID HOM05D000604
  • #Genes/#Species 936/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g026570.1

Descriptions

  • Description nucleotide binding, nucleic acid binding, RNA binding | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: biological_process unknown | LOCATED IN: nucleolus | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait , RNA recognition, domain 1 | BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
ISO
PLAZA Homology (enrichment)regulation of transcription by RNA polymerase II HOM05D000604

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0016538
ISO
PLAZA Homology (enrichment)cyclin-dependent protein serine/threonine kinase regulator activity HOM05D000604

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT4G19610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034423 Probable RNA-binding protein 19, RNA recognition motif 5
IPR035979 RNA-binding domain superfamily
IPR003954 RNA recognition motif domain, eukaryote
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated