Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.7507 Avicennia marina HOM05D004841 ORTHO05D005874 8.4e-188 660.2 338 100.0
Migut.M00886 Erythranthe guttata HOM05D004841 ORTHO05D005874 6.1e-154 547.7 335 82.4
Oeu013128.1 Olea europaea HOM05D004841 ORTHO05D005874 1.4e-150 536.6 339 81.7
SGA_v2.0_scaffold146G36131 Striga asiatica HOM05D004841 ORTHO05D005874 2.3e-145 519.2 315 82.2
Hma1.2p1_0594F.1_g185890 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 1.4e-137 493.4 334 72.2
GSVIVG01034157001 Vitis vinifera HOM05D004841 ORTHO05D005874 4.0e-137 491.9 337 70.6
Solyc02g078830.4 Solanum lycopersicum HOM05D004841 ORTHO05D005874 6.8e-137 491.1 338 72.2
PGSC0003DMG400022420 Solanum tuberosum HOM05D004841 ORTHO05D005874 1.2e-136 490.3 338 71.6
Nitab4.5_0004020g0010 Nicotiana tabacum HOM05D004841 ORTHO05D005874 2.6e-136 489.2 319 74.0
CSS0019612 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.4e-136 488.8 338 72.2
CSS0027900 Camellia sinensis var. sinensis HOM05D004841 ORTHO05D005874 3.4e-136 488.8 338 72.2
Sopen02g023650 Solanum pennellii HOM05D004841 ORTHO05D005874 3.4e-136 488.8 338 71.6
Nitab4.5_0000501g0020 Nicotiana tabacum HOM05D004841 ORTHO05D005874 2.4e-134 482.6 319 73.7
Cc02_g29720 Coffea canephora HOM05D004841 ORTHO05D005874 5.9e-133 478.0 341 71.3
Peaxi162Scf00465g00119 Petunia axillaris HOM05D004841 ORTHO05D005874 3.8e-132 475.3 321 73.2
Rhsim13G0116700 Rhododendron simsii HOM05D004841 ORTHO05D005874 2.5e-131 472.6 343 68.8
Manes.17G073300 Manihot esculenta HOM05D004841 ORTHO05D005874 7.2e-131 471.1 337 68.5
PGR031G1170 Punica granatum HOM05D004841 ORTHO05D005874 6.8e-129 464.5 330 68.2
Sed0021741 Sechium edule HOM05D004841 ORTHO05D005874 8.8e-129 464.2 330 69.4
MD05G1280700 Malus domestica HOM05D004841 ORTHO05D005874 4.4e-128 461.8 325 68.3
Prupe.4G084200 Prunus persica HOM05D004841 ORTHO05D005874 9.8e-128 460.7 337 66.2
vmacro03353 Vaccinium macrocarpon HOM05D004841 ORTHO05D005874 1.4e-126 456.8 340 67.1
DCAR_027897 Daucus carota HOM05D004841 ORTHO05D005874 3.1e-126 455.7 333 70.0
Potri.012G107400 Populus trichocarpa HOM05D004841 ORTHO05D005874 3.1e-126 455.7 340 67.4
Lj2A321T65 Lonicera japonica HOM05D004841 ORTHO05D005874 5.4e-126 454.9 318 72.0
MD10G1259100 Malus domestica HOM05D004841 ORTHO05D005874 7.0e-126 454.5 325 68.0
CANSAT11G1247 Cannabis sativa HOM05D004841 ORTHO05D005874 1.2e-125 453.8 338 64.5
Duzib235G0160 Durio zibethinus HOM05D004841 ORTHO05D005874 1.6e-125 453.4 337 68.0
Lsat_1_v5_gn_4_29561 Lactuca sativa HOM05D004841 ORTHO05D005874 1.6e-125 453.4 334 68.0
COL.COLO4_31030 Corchorus olitorius HOM05D004841 ORTHO05D005874 4.5e-125 451.8 325 68.3
Atru.chr10.1099 Acer truncatum HOM05D004841 ORTHO05D005874 7.7e-125 451.1 328 68.6
Cfa000914 Carpinus fangiana HOM05D004841 ORTHO05D005874 7.7e-125 451.1 339 66.7
Eucgr.E02427 Eucalyptus grandis HOM05D004841 ORTHO05D005874 1.0e-124 450.7 326 67.5
CiPaw.10G089600 Carya illinoinensis HOM05D004841 ORTHO05D005874 2.9e-124 449.1 337 66.2
SalBow8G2637 Salvia bowleyana HOM05D004841 ORTHO05D005874 3.8e-124 448.7 339 69.9
QL05p055481 Quercus lobata HOM05D004841 ORTHO05D005874 5.0e-124 448.4 324 67.9
Dinv21532 Davidia involucrata HOM05D004841 ORTHO05D005874 6.6e-124 448.0 337 67.4
HanXRQChr17g0564621 Helianthus annuus HOM05D004841 ORTHO05D005874 8.6e-124 447.6 321 70.7
THA.LOC104821761 Tarenaya hassleriana HOM05D004841 ORTHO05D005874 1.1e-123 447.2 329 66.3
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 1.9e-123 446.4 319 68.7
TWI63G0939 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 2.5e-123 446.0 335 65.1
Actinidia01573 Actinidia chinensis HOM05D004841 ORTHO05D005874 3.3e-123 445.7 336 67.9
Ciclev10015824m.g Citrus clementina HOM05D004841 ORTHO05D005874 3.3e-123 445.7 327 67.3
FvH4_3g05180 Fragaria vesca HOM05D004841 ORTHO05D005874 4.3e-123 445.3 327 65.4
RcHm_v2.0_Chr5g0014571 Rosa chinensis HOM05D004841 ORTHO05D005874 4.3e-123 445.3 326 65.0
FAN11G3214 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.6e-123 444.9 327 65.1
FAN25G3271 Fragaria x ananassa HOM05D004841 ORTHO05D005874 5.6e-123 444.9 327 65.1
FAN21G1690 Fragaria x ananassa HOM05D004841 ORTHO05D005874 7.3e-123 444.5 327 64.8
CsaV3_6G051930 Cucumis sativus L. HOM05D004841 ORTHO05D005874 9.5e-123 444.1 338 65.4
CiPaw.09G120900 Carya illinoinensis HOM05D004841 ORTHO05D005874 1.2e-122 443.7 336 66.4
TWI34G1122 Tripterygium wilfordii HOM05D004841 ORTHO05D005874 1.2e-122 443.7 325 66.5
MELO3C007114.2 Cucumis melo HOM05D004841 ORTHO05D005874 2.8e-122 442.6 338 64.8
FAN16G1445 Fragaria x ananassa HOM05D004841 ORTHO05D005874 3.6e-122 442.2 327 64.5
FAN16G2733 Fragaria x ananassa HOM05D004841 ORTHO05D005874 4.7e-122 441.8 327 64.5
TAR628G1076 Trochodendron aralioides HOM05D004841 ORTHO05D005874 8.0e-122 441.0 322 67.4
Gorai.011G046600 Gossypium raimondii HOM05D004841 ORTHO05D005874 1.4e-121 440.3 325 67.4
Haze_05641 Corylus avellana HOM05D004841 ORTHO05D005874 4.0e-121 438.7 333 66.4
Gohir.A10G042800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 6.8e-121 438.0 325 67.1
Gohir.D10G043800 Gossypium hirsutum HOM05D004841 ORTHO05D005874 1.2e-120 437.2 325 67.1
TPR.G29935 Trifolium pratense HOM05D004841 ORTHO05D005874 1.5e-120 436.8 342 64.6
Thecc.06G146500 Theobroma cacao HOM05D004841 ORTHO05D005874 2.0e-120 436.4 325 68.0
BcaB05g24290 Brassica carinata HOM05D004841 ORTHO05D005874 2.6e-120 436.0 344 62.2
BcaB03g15189 Brassica carinata HOM05D004841 ORTHO05D005874 3.4e-120 435.6 339 63.1
Lalb_Chr11g0073321 Lupinus albus HOM05D004841 ORTHO05D005874 4.4e-120 435.3 316 68.0
Nn3g20436 Nelumbo nucifera HOM05D004841 ORTHO05D005874 4.4e-120 435.3 325 65.8
Sp5g22530 Schrenkiella parvula HOM05D004841 ORTHO05D005874 5.7e-120 434.9 329 65.0
Psat1g020080 Pisum sativum HOM05D004841 ORTHO05D005874 9.8e-120 434.1 333 65.8
arahy.Tifrunner.gnm1.ann1.0DR3QG Arachis hypogaea HOM05D004841 ORTHO05D005874 1.3e-119 433.7 320 67.2
Ca_03447_v3 Cicer arietinum L. HOM05D004841 ORTHO05D005874 1.7e-119 433.3 321 66.0
arahy.Tifrunner.gnm1.ann1.9IA9LY Arachis hypogaea HOM05D004841 ORTHO05D005874 2.9e-119 432.6 316 67.4
C06p42730 Brassica napus HOM05D004841 ORTHO05D005874 3.7e-119 432.2 339 62.2
A07p34060 Brassica napus HOM05D004841 ORTHO05D005874 4.9e-119 431.8 339 61.9
BraA02t06489Z Brassica rapa HOM05D004841 ORTHO05D005874 6.4e-119 431.4 339 61.9
Aa31LG2G2230 Aethionema arabicum HOM05D004841 ORTHO05D005874 1.1e-118 430.6 329 63.5
arahy.Tifrunner.gnm1.ann1.4L8DWS Arachis hypogaea HOM05D004841 ORTHO05D005874 1.4e-118 430.3 327 66.4
BraA07t31032Z Brassica rapa HOM05D004841 ORTHO05D005874 1.4e-118 430.3 333 62.5
AL2G19660 Arabidopsis lyrata HOM05D004841 ORTHO05D005874 1.8e-118 429.9 345 62.9
AT1G65030 Arabidopsis thaliana HOM05D004841 ORTHO05D005874 2.4e-118 429.5 342 62.6
Medtr2g049300 Medicago truncatula HOM05D004841 ORTHO05D005874 2.4e-118 429.5 327 65.7
A02p14280 Brassica napus HOM05D004841 ORTHO05D005874 3.2e-118 429.1 339 61.7
ECA234G4271 Erigeron canadensis HOM05D004841 ORTHO05D005874 4.1e-118 428.7 338 65.4
arahy.Tifrunner.gnm1.ann1.V1DCF9 Arachis hypogaea HOM05D004841 ORTHO05D005874 9.2e-118 427.6 316 67.1
Thhalv10018816m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 1.6e-117 426.8 329 63.8
C02p23090 Brassica napus HOM05D004841 ORTHO05D005874 4.6e-117 425.2 329 63.2
Sc02g0001540 Simmondsia chinensis HOM05D004841 ORTHO05D005874 4.6e-117 425.2 321 65.4
C06p42780 Brassica napus HOM05D004841 ORTHO05D005874 1.3e-116 423.7 329 62.6
BolC2t08451H Brassica oleracea HOM05D004841 ORTHO05D005874 1.3e-116 423.7 329 62.9
MBI02_g29870_MAGBIO Magnolia biondii HOM05D004841 ORTHO05D005874 5.0e-116 421.8 326 65.0
Carub.0002s1024 Capsella rubella HOM05D004841 ORTHO05D005874 6.6e-116 421.4 339 60.8
CARHR056500 Cardamine hirsuta HOM05D004841 ORTHO05D005874 1.9e-115 419.9 339 60.2
EL10Ac7g16662 Beta vulgaris HOM05D004841 ORTHO05D005874 5.6e-115 418.3 334 63.5
BolC6t39162H Brassica oleracea HOM05D004841 ORTHO05D005874 1.6e-114 416.8 358 58.4
ClCG01G024810 Citrullus lanatus HOM05D004841 ORTHO05D005874 2.1e-114 416.4 331 63.7
Ah.08g211520 Amaranthus hybridus HOM05D004841 ORTHO05D005874 3.6e-114 415.6 330 63.3
Dinv32222 Davidia involucrata HOM05D004841 ORTHO05D005874 2.3e-113 412.9 261 76.2
PSO541G1633 Papaver somniferum HOM05D004841 ORTHO05D005874 6.8e-113 411.4 326 62.0
PSO675G7289 Papaver somniferum HOM05D004841 ORTHO05D005874 6.8e-113 411.4 326 62.0
Glyma.09G086200 Glycine max HOM05D004841 ORTHO05D005874 1.2e-112 410.6 322 63.0
Glyma.15G195000 Glycine max HOM05D004841 ORTHO05D005874 1.2e-112 410.6 323 62.8
Phvul.009G215400 Phaseolus vulgaris HOM05D004841 ORTHO05D005874 2.9e-111 406.0 316 63.3
Lj6g0003285 Lotus japonicus HOM05D004841 ORTHO05D005874 8.3e-111 404.4 315 63.2
Hund20587 Selenicereus undatus HOM05D004841 ORTHO05D005874 1.4e-110 403.7 340 60.6
BcaNung05075 Brassica carinata HOM05D004841 ORTHO05D005874 1.9e-110 403.3 339 60.8
Aqoxy5G03944 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 4.1e-110 402.1 329 60.5
VMungo1309G2918 Vigna mungo HOM05D004841 ORTHO05D005874 1.6e-109 400.2 316 62.3
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 2.7e-109 399.4 326 60.4
PSO017G5522 Papaver somniferum HOM05D004841 ORTHO05D005874 1.3e-108 397.1 322 61.2
SHI02861 Sapria himalayana HOM05D004841 ORTHO05D005874 1.6e-98 363.6 291 61.5
HPP92_012189 Vanilla planifolia HOM05D004841 ORTHO05D005874 2.1e-98 363.2 318 58.8
AUR62026924 Chenopodium quinoa HOM05D004841 ORTHO05D005874 6.0e-93 345.1 252 68.7
ATR0772G214 Amborella trichopoda HOM05D004841 ORTHO05D005874 4.2e-86 322.4 324 48.1
Zm00001eb328580 Zea mays HOM05D004841 ORTHO05D005874 2.8e-82 309.7 330 50.6
SEGI_08519 Sequoiadendron giganteum HOM05D004841 ORTHO05D005874 1.4e-81 307.4 343 44.0
Mapoly0001s0498 Marchantia polymorpha HOM05D004841 ORTHO05D005874 8.4e-71 271.6 338 42.6
unitig_749.g13802 Utricularia gibba HOM05D004841 ORTHO05D005874 3.7e-66 256.1 180 72.8
CDE07G1158 Ceratophyllum demersum HOM05D004841 ORTHO05D005874 3.2e-62 243.0 223 54.7
BcaNung05071 Brassica carinata HOM05D004841 ORTHO05D005874 5.5e-62 242.3 184 62.5
AUR62042056 Chenopodium quinoa HOM05D004841 ORTHO05D005874 9.3e-62 241.5 180 67.2
BcaNung05072 Brassica carinata HOM05D004841 ORTHO05D005874 2.1e-61 240.4 184 62.0
Os12g0615900 Oryza sativa ssp. japonica HOM05D004841 ORTHO05D005874 1.6e-58 230.7 253 49.8
SMO358G0291 Selaginella moellendorffii HOM05D004841 ORTHO05D005874 9.0e-57 224.9 335 39.4
Sabra13G0018400 Salix brachista HOM05D004841 ORTHO05D004358 2.7e-53 213.4 144 71.5
Cpa.g.sc17.34 Carica papaya HOM05D004841 ORTHO05D005874 1.4e-49 201.1 142 68.3
Oeu062572.1 Olea europaea HOM05D004841 ORTHO05D005874 1.4e-49 201.1 138 75.4
Cre03.g205800 Chlamydomonas reinhardtii HOM05D004841 ORTHO05D005874 1.6e-45 187.6 285 36.5
Oeu030952.1 Olea europaea HOM05D004841 ORTHO05D005874 1.8e-41 174.1 280 43.6
unitig_749.g13803 Utricularia gibba HOM05D004841 ORTHO05D005874 4.1e-41 172.9 122 66.4
Hma1.2p1_0594F.1_g185900 Hydrangea macrophylla HOM05D004841 ORTHO05D005874 5.0e-39 166.0 99 81.8
Sabra13G0018300 Salix brachista HOM05D004841 ORTHO05D005874 3.6e-37 159.8 124 65.3
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 1.1e-35 154.8 98 74.5
C06p41890 Brassica napus HOM05D004841 ORTHO05D005874 1.5e-35 154.5 118 61.0
Sabra13G0015400 Salix brachista HOM05D004841 ORTHO05D005874 2.6e-35 153.7 98 73.5
Sabra13G0014300 Salix brachista HOM05D004841 ORTHO05D005874 7.4e-35 152.1 98 72.4
Sabra13G0014700 Salix brachista HOM05D000070 ORTHO05D000047 7.4e-35 152.1 98 72.4
Pp3c9_24890 Physcomitrium patens HOM05D004841 ORTHO05D005874 2.2e-34 150.6 190 46.8
BolC6t39240H Brassica oleracea HOM05D004841 ORTHO05D005874 4.8e-34 149.4 116 60.3
MCO15G572 Micromonas commoda HOM05D004841 ORTHO05D005874 1.6e-32 144.4 368 28.5
CBR_g4467 Chara braunii HOM05D004841 ORTHO05D005874 2.9e-31 140.2 284 31.3
Pp3c15_25070 Physcomitrium patens HOM05D004841 ORTHO05D005874 6.5e-31 139.0 171 44.4
Cpa.g.c47956 Carica papaya HOM05D004841 ORTHO05D005874 5.5e-30 136.0 99 62.6
Sabra13G0015100 Salix brachista HOM05D004841 ORTHO05D005874 1.3e-26 124.8 84 70.2
Sabra13G0019300 Salix brachista HOM05D004841 ORTHO05D005874 1.3e-26 124.8 84 70.2
ATR1098G095 Amborella trichopoda HOM05D004841 ORTHO05D005874 1.1e-25 121.7 164 38.4
VMungo0251G1518 Vigna mungo HOM05D005230 ORTHO05D051605 2.4e-25 120.6 135 51.9
AagrBONN_evm.TU.Sc2ySwM_117.2336 Anthoceros agrestis HOM05D004841 ORTHO05D005874 1.2e-24 118.2 156 41.7
VMungo0720G0475 Vigna mungo HOM05D005230 ORTHO05D051605 1.3e-23 114.8 120 54.2
VMungo0331G1481 Vigna mungo HOM05D004841 ORTHO05D005874 1.6e-21 107.8 113 48.7
Thhalv10019798m.g Eutrema salsugineum HOM05D004841 ORTHO05D005874 1.0e-20 105.1 130 46.2
VMungo1382G0002 Vigna mungo HOM05D004841 ORTHO05D005874 2.8e-18 97.1 99 50.5
Oeu030951.1 Olea europaea HOM05D004841 ORTHO05D005874 3.1e-17 93.6 122 47.5
Sabra13G0018600 Salix brachista HOM05D004841 ORTHO05D005874 1.8e-12 77.8 82 53.7
Actinidia16778 Actinidia chinensis HOM05D004841 ORTHO05D005874 9.8e-11 72.0 49 67.3
BcaC03g14843 Brassica carinata HOM05D004841 ORTHO05D005874 1.7e-10 71.2 57 64.9
VMungo0712G0001 Vigna mungo HOM05D004841 ORTHO05D005874 3.7e-10 70.1 144 38.2
BcaC08g46242 Brassica carinata HOM05D004841 ORTHO05D005874 1.5e-06 58.2 40 62.5


User provided reference genes

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