Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.28084 Avicennia marina HOM05D001331 ORTHO05D001157 4.9e-82 307.8 156 100.0
SalBow4G2752 Salvia bowleyana HOM05D001331 ORTHO05D001157 9.6e-46 187.2 184 57.1
Oeu047541.1 Olea europaea HOM05D001331 ORTHO05D001157 2.0e-43 179.5 158 63.3
SGA_v2.0_scaffold4G02244 Striga asiatica HOM05D001331 ORTHO05D001157 3.4e-43 178.7 153 62.1
Oeu010360.1 Olea europaea HOM05D001331 ORTHO05D001157 2.3e-39 166.0 158 61.4
Migut.N01488 Erythranthe guttata HOM05D001331 ORTHO05D001157 9.0e-36 154.1 156 56.4
SGA_v2.0_scaffold95G28786 Striga asiatica HOM05D001331 ORTHO05D001157 2.6e-35 152.5 144 56.2
Nitab4.5_0000892g0020 Nicotiana tabacum HOM05D001331 ORTHO05D001157 1.1e-33 147.1 151 55.6
Peaxi162Scf00058g00049 Petunia axillaris HOM05D001331 ORTHO05D001157 2.1e-32 142.9 154 53.2
Sopen01g033690 Solanum pennellii HOM05D001331 ORTHO05D001157 3.6e-32 142.1 153 52.9
PGSC0003DMG400025255 Solanum tuberosum HOM05D001331 ORTHO05D001157 1.0e-31 140.6 150 53.3
Cc02_g27380 Coffea canephora HOM05D001331 ORTHO05D001157 1.4e-31 140.2 158 52.5
Solyc01g086690.2 Solanum lycopersicum HOM05D001331 ORTHO05D001157 1.8e-31 139.8 153 50.3
Nitab4.5_0008598g0010 Nicotiana tabacum HOM05D001331 ORTHO05D001157 3.9e-31 138.7 150 52.0
CAN.G1393.14 Capsicum annuum HOM05D001331 ORTHO05D001157 1.3e-29 133.7 150 52.0
Lj5C342T6 Lonicera japonica HOM05D001331 ORTHO05D001157 2.9e-26 122.5 156 51.3
Lj9C627T10 Lonicera japonica HOM05D001331 ORTHO05D001157 6.5e-26 121.3 156 50.0
unitig_8.g3409 Utricularia gibba HOM05D001331 ORTHO05D001157 8.5e-26 120.9 120 53.3
DCAR_015685 Daucus carota HOM05D001331 ORTHO05D001157 2.6e-22 109.4 146 51.4
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 4.8e-21 105.1 150 49.3
Dinv00376 Davidia involucrata HOM05D001331 ORTHO05D001157 1.4e-20 103.6 156 45.5
Lsat_1_v5_gn_1_108760 Lactuca sativa HOM05D001331 ORTHO05D001157 5.3e-20 101.7 152 43.4
Dinv43910 Davidia involucrata HOM05D001331 ORTHO05D001157 9.1e-20 100.9 152 47.4
Manes.03G096000 Manihot esculenta HOM05D001331 ORTHO05D001157 1.2e-19 100.5 158 47.5
Dinv43475 Davidia involucrata HOM05D001331 ORTHO05D001157 2.6e-19 99.4 155 45.2
TAR623G0247 Trochodendron aralioides HOM05D001331 ORTHO05D001157 3.5e-19 99.0 158 46.8
QL04p004796 Quercus lobata HOM05D001331 ORTHO05D001157 1.3e-18 97.1 141 48.2
FvH4_7g00520 Fragaria vesca HOM05D001331 ORTHO05D001157 3.8e-18 95.5 149 43.6
FAN10G4137 Fragaria x ananassa HOM05D001331 ORTHO05D001157 1.1e-17 94.0 148 43.2
PGR044G0531 Punica granatum HOM05D001331 ORTHO05D001157 1.1e-17 94.0 159 42.1
FAN03G2484 Fragaria x ananassa HOM05D001331 ORTHO05D001157 1.4e-17 93.6 148 43.2
Rhsim07G0053200 Rhododendron simsii HOM05D001331 ORTHO05D001157 1.9e-17 93.2 147 45.6
Haze_03244 Corylus avellana HOM05D001331 ORTHO05D001157 3.2e-17 92.4 144 44.4
TWI09G0060 Tripterygium wilfordii HOM05D001331 ORTHO05D001157 3.2e-17 92.4 156 42.9
Eucgr.J01249 Eucalyptus grandis HOM05D001331 ORTHO05D001157 4.2e-17 92.0 146 44.5
FAN06G3408 Fragaria x ananassa HOM05D001331 ORTHO05D001157 4.2e-17 92.0 148 42.6
TAR369G1001 Trochodendron aralioides HOM05D001331 ORTHO05D001157 9.4e-17 90.9 144 46.5
MD02G1316900 Malus domestica HOM05D001331 ORTHO05D001157 1.2e-16 90.5 144 45.8
MD07G1005000 Malus domestica HOM05D001331 ORTHO05D001157 3.6e-16 89.0 149 45.6
Sopen02g031270 Solanum pennellii HOM05D018915 ORTHO05D019375 1.0e-15 87.4 139 41.0
Solyc02g086540.3 Solanum lycopersicum HOM05D001331 ORTHO05D001157 1.8e-15 86.7 123 44.7
EL10Ac9g21830 Beta vulgaris HOM05D001331 ORTHO05D001157 2.3e-15 86.3 141 41.8
ClCG04G000290 Citrullus lanatus HOM05D001331 ORTHO05D001157 6.7e-15 84.7 123 46.3
RcHm_v2.0_Chr1g0314311 Rosa chinensis HOM05D001331 ORTHO05D001157 8.8e-15 84.3 148 41.9
Nitab4.5_0002468g0080 Nicotiana tabacum HOM05D001331 ORTHO05D001157 1.1e-14 84.0 136 41.2
AUR62011440 Chenopodium quinoa HOM05D001331 ORTHO05D001157 2.6e-14 82.8 142 41.5
Gohir.A08G026800 Gossypium hirsutum HOM05D001331 ORTHO05D001157 2.6e-14 82.8 124 44.4
Nn2g12130 Nelumbo nucifera HOM05D001331 ORTHO05D001157 3.3e-14 82.4 152 42.1
CANSAT54G2734 Cannabis sativa HOM05D001331 ORTHO05D001157 5.7e-14 81.6 144 42.4
Lj3g0027015 Lotus japonicus HOM05D001331 ORTHO05D001157 5.7e-14 81.6 149 42.3
Gohir.D08G037601 Gossypium hirsutum HOM05D001331 ORTHO05D001157 7.4e-14 81.3 124 43.5
Duzib268G0738 Durio zibethinus HOM05D001331 ORTHO05D001157 9.7e-14 80.9 107 46.7
CiPaw.11G071700 Carya illinoinensis HOM05D001331 ORTHO05D001157 1.7e-13 80.1 126 44.4
Sed0024883 Sechium edule HOM05D001331 ORTHO05D001157 1.7e-13 80.1 110 47.3
Gorai.004G035600 Gossypium raimondii HOM05D001331 ORTHO05D001157 3.7e-13 79.0 124 42.7
CsaV3_4G010560 Cucumis sativus L. HOM05D001331 ORTHO05D001157 6.3e-13 78.2 122 44.3
Sc08g0004370 Simmondsia chinensis HOM05D001331 ORTHO05D001157 8.2e-13 77.8 148 41.2
Sc09g0004140 Simmondsia chinensis HOM05D001331 ORTHO05D001157 8.2e-13 77.8 132 42.4
AUR62016622 Chenopodium quinoa HOM05D001331 ORTHO05D001157 1.1e-12 77.4 105 48.6
MBI01_g15754_MAGBIO Magnolia biondii HOM05D001331 ORTHO05D001157 1.1e-12 77.4 158 38.6
Aqoxy3G00783 Aquilegia oxysepala HOM05D001331 ORTHO05D001157 4.1e-12 75.5 124 44.4
Potri.001G225600 Populus trichocarpa HOM05D001331 ORTHO05D001157 4.1e-12 75.5 114 43.0
DCAR_032395 Daucus carota HOM05D001331 ORTHO05D001157 5.3e-12 75.1 99 45.5
Atru.chr11.2669 Acer truncatum HOM05D001331 ORTHO05D001157 9.1e-12 74.3 145 40.7
Aqoxy1G00187 Aquilegia oxysepala HOM05D001331 ORTHO05D001157 9.1e-12 74.3 136 41.2
arahy.Tifrunner.gnm1.ann1.6E2RRN Arachis hypogaea HOM05D001331 ORTHO05D001157 1.6e-11 73.6 158 39.2
CAN.G1184.4 Capsicum annuum HOM05D001331 ORTHO05D001157 2.6e-11 72.8 116 40.5
MBI04_g27129_MAGBIO Magnolia biondii HOM05D001331 ORTHO05D001157 2.6e-11 72.8 184 36.4
ECA248G2009 Erigeron canadensis HOM05D001331 ORTHO05D001157 3.5e-11 72.4 157 37.6
PSO384G4319 Papaver somniferum HOM05D001331 ORTHO05D001157 3.5e-11 72.4 137 38.7
PSO339G3524 Papaver somniferum HOM05D001331 ORTHO05D001157 4.5e-11 72.0 137 41.6
Ah.01g020180 Amaranthus hybridus HOM05D001331 ORTHO05D001157 1.0e-10 70.9 138 41.3
Sed0008374 Sechium edule HOM05D001331 ORTHO05D001157 1.7e-10 70.1 123 39.8
Lalb_Chr01g0015201 Lupinus albus HOM05D001331 ORTHO05D001157 2.2e-10 69.7 88 53.4
Sabra16G0134000 Salix brachista HOM05D001331 ORTHO05D001157 2.2e-10 69.7 125 40.0
THA.LOC104809869 Tarenaya hassleriana HOM05D001331 ORTHO05D001157 2.2e-10 69.7 106 48.1
arahy.Tifrunner.gnm1.ann1.X4L9I4 Arachis hypogaea HOM05D001331 ORTHO05D001157 2.9e-10 69.3 154 38.3
MELO3C023173.2 Cucumis melo HOM05D001331 ORTHO05D001157 3.8e-10 68.9 67 53.7
HanXRQChr01g0018521 Helianthus annuus HOM05D001331 ORTHO05D001157 3.8e-10 68.9 162 35.8
MBI02_g11457_MAGBIO Magnolia biondii HOM05D001331 ORTHO05D001157 3.8e-10 68.9 158 37.3
GSVIVG01032038001 Vitis vinifera HOM05D001331 ORTHO05D001157 5.0e-10 68.6 146 37.7
CAN.G1799.1 Capsicum annuum HOM05D001331 ORTHO05D001157 1.1e-09 67.4 89 46.1
CAN.G1799.6 Capsicum annuum HOM05D001331 ORTHO05D001157 1.1e-09 67.4 89 46.1
Carub.0006s3326 Capsella rubella HOM05D001331 ORTHO05D001157 1.5e-09 67.0 101 46.5
Ca_24264_v3 Cicer arietinum L. HOM05D001331 ORTHO05D001157 1.5e-09 67.0 141 34.8
Psat1g000360 Pisum sativum HOM05D001331 ORTHO05D001157 7.2e-09 64.7 93 43.0
Medtr3g005770 Medicago truncatula HOM05D001331 ORTHO05D001157 1.2e-08 63.9 122 39.3
Dinv32389 Davidia involucrata HOM05D001331 ORTHO05D001157 1.6e-08 63.5 60 55.0
Ciclev10030924m.g Citrus clementina HOM05D001331 ORTHO05D001157 2.1e-08 63.2 147 36.1
Aa31LG11G7500 Aethionema arabicum HOM05D001331 ORTHO05D001157 4.7e-08 62.0 101 42.6
TPR.G17841 Trifolium pratense HOM05D001331 ORTHO05D001157 4.7e-08 62.0 128 38.3
CARHR169950 Cardamine hirsuta HOM05D001331 ORTHO05D001157 1.4e-07 60.5 110 40.0
Thhalv10005819m.g Eutrema salsugineum HOM05D001331 ORTHO05D001157 1.8e-07 60.1 101 43.6
AL6G48950 Arabidopsis lyrata HOM05D001331 ORTHO05D001157 3.0e-07 59.3 89 44.9
Zm00001eb412050 Zea mays HOM05D001331 ORTHO05D001157 4.0e-07 58.9 91 41.8
Glyma.08G151600 Glycine max HOM05D001331 ORTHO05D001157 5.2e-07 58.5 112 40.2
AT3G59550 Arabidopsis thaliana HOM05D001331 ORTHO05D001157 6.7e-07 58.2 98 43.9
BcaB02g08215 Brassica carinata HOM05D001331 ORTHO05D001157 6.7e-07 58.2 102 43.1
BraA09t40618Z Brassica rapa HOM05D001331 ORTHO05D001157 6.7e-07 58.2 101 41.6
BcaC07g40483 Brassica carinata HOM05D001331 ORTHO05D001157 8.8e-07 57.8 101 41.6
BolC4t24898H Brassica oleracea HOM05D001331 ORTHO05D001157 8.8e-07 57.8 106 43.4
Sp5g03590 Schrenkiella parvula HOM05D001331 ORTHO05D001157 8.8e-07 57.8 102 43.1
AL5G41480 Arabidopsis lyrata HOM05D001331 ORTHO05D001157 1.2e-06 57.4 98 42.9
BcaC07g40481 Brassica carinata HOM05D001331 ORTHO05D001157 1.2e-06 57.4 101 41.6
C08p34550 Brassica napus HOM05D001331 ORTHO05D001157 1.2e-06 57.4 101 41.6
BolC8t51057H Brassica oleracea HOM05D001331 ORTHO05D001157 1.2e-06 57.4 101 41.6
Hund03688 Selenicereus undatus HOM05D001331 ORTHO05D001157 1.2e-06 57.4 148 33.8
A09p51830 Brassica napus HOM05D001331 ORTHO05D001157 1.5e-06 57.0 101 41.6
Carub.0005s2629 Capsella rubella HOM05D001331 ORTHO05D001157 1.5e-06 57.0 117 38.5
BcaC02g10061 Brassica carinata HOM05D001331 ORTHO05D001157 2.0e-06 56.6 100 44.0
C04p33350 Brassica napus HOM05D001331 ORTHO05D001157 2.6e-06 56.2 55 56.4
Phvul.005G038800 Phaseolus vulgaris HOM05D001331 ORTHO05D001157 4.4e-06 55.5 113 39.8


User provided reference genes

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