Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.27763 Avicennia marina HOM05D002133 ORTHO05D002256 3.2e-69 265.0 137 100.0
Migut.N01141 Erythranthe guttata HOM05D002133 ORTHO05D002256 6.9e-40 167.5 162 56.8
SGA_v2.0_scaffold219G42529 Striga asiatica HOM05D002133 ORTHO05D002256 6.7e-35 151.0 162 53.1
Oeu037279.1 Olea europaea HOM05D002133 ORTHO05D002256 8.0e-20 100.9 160 42.5
Lj5A219T39 Lonicera japonica HOM05D002133 ORTHO05D002256 1.6e-12 76.6 160 33.8
Prupe.1G423700 Prunus persica HOM05D002133 ORTHO05D002256 2.1e-12 76.3 159 32.7
TAR376G1139 Trochodendron aralioides HOM05D002133 ORTHO05D002256 2.1e-12 76.3 163 33.1
TAR376G0191 Trochodendron aralioides HOM05D002133 ORTHO05D002256 2.7e-12 75.9 163 33.1
CsaV3_4G035010 Cucumis sativus L. HOM05D002133 ORTHO05D002256 4.7e-12 75.1 150 33.3
CiPaw.07G175700 Carya illinoinensis HOM05D002133 ORTHO05D002256 8.0e-12 74.3 151 32.5
QL12p037925 Quercus lobata HOM05D002133 ORTHO05D002256 8.0e-12 74.3 153 33.3
SGA_v2.0_scaffold28G11825 Striga asiatica HOM05D002133 ORTHO05D002256 2.3e-11 72.8 147 32.0
Gohir.D05G265300 Gossypium hirsutum HOM05D002133 ORTHO05D002256 3.0e-11 72.4 159 32.1
TAR625G0071 Trochodendron aralioides HOM05D002133 ORTHO05D002256 3.0e-11 72.4 160 34.4
ClCG05G020570 Citrullus lanatus HOM05D002133 ORTHO05D002256 4.0e-11 72.0 150 32.7
MD08G1085800 Malus domestica HOM05D002133 ORTHO05D002256 4.0e-11 72.0 146 33.6
MD15G1071000 Malus domestica HOM05D002133 ORTHO05D002256 5.2e-11 71.6 146 34.2
Thecc.08G089800 Theobroma cacao HOM05D002133 ORTHO05D002256 5.2e-11 71.6 146 34.2
TAR381G1089 Trochodendron aralioides HOM05D002133 ORTHO05D002256 5.2e-11 71.6 160 34.4
Duzib093G0932 Durio zibethinus HOM05D002133 ORTHO05D002256 6.8e-11 71.2 146 33.6
RcHm_v2.0_Chr6g0309471 Rosa chinensis HOM05D002133 ORTHO05D002256 6.8e-11 71.2 146 34.9
FvH4_2g33200 Fragaria vesca HOM05D002133 ORTHO05D002256 8.8e-11 70.9 146 34.9
FAN20G2377 Fragaria x ananassa HOM05D002133 ORTHO05D002256 8.8e-11 70.9 146 34.9
FAN24G1433 Fragaria x ananassa HOM05D002133 ORTHO05D002256 8.8e-11 70.9 146 34.9
Glyma.06G046300 Glycine max HOM05D002133 ORTHO05D002256 8.8e-11 70.9 152 32.9
FAN15G1988 Fragaria x ananassa HOM05D002133 ORTHO05D002256 1.2e-10 70.5 146 34.9
Gohir.D05G212800 Gossypium hirsutum HOM05D002133 ORTHO05D002256 1.2e-10 70.5 146 33.6
CAN.G724.13 Capsicum annuum HOM05D002133 ORTHO05D002256 1.5e-10 70.1 151 31.8
MELO3C016813.2 Cucumis melo HOM05D002133 ORTHO05D002256 1.5e-10 70.1 150 32.0
Glyma.17G235100 Glycine max HOM05D002133 ORTHO05D002256 1.5e-10 70.1 146 32.9
Gorai.009G219300 Gossypium raimondii HOM05D002133 ORTHO05D002256 1.5e-10 70.1 146 33.6
Nitab4.5_0000164g0130 Nicotiana tabacum HOM05D002133 ORTHO05D002256 1.5e-10 70.1 150 32.7
PSO675G6693 Papaver somniferum HOM05D002133 ORTHO05D002256 1.5e-10 70.1 174 32.2
Peaxi162Scf00081g01710 Petunia axillaris HOM05D002133 ORTHO05D002256 2.0e-10 69.7 149 33.6
FAN27G0263 Fragaria x ananassa HOM05D002133 ORTHO05D002256 2.6e-10 69.3 146 34.2
Gorai.009G277100 Gossypium raimondii HOM05D002133 ORTHO05D002256 2.6e-10 69.3 146 32.9
Phvul.001G027600 Phaseolus vulgaris HOM05D002133 ORTHO05D002256 2.6e-10 69.3 146 33.6
Phvul.009G071500 Phaseolus vulgaris HOM05D002133 ORTHO05D002256 2.6e-10 69.3 146 31.5
Actinidia10193 Actinidia chinensis HOM05D002133 ORTHO05D002256 3.4e-10 68.9 152 33.6
Actinidia22690 Actinidia chinensis HOM05D002133 ORTHO05D002256 3.4e-10 68.9 152 34.2
Gohir.A05G209400 Gossypium hirsutum HOM05D002133 ORTHO05D002256 3.4e-10 68.9 146 33.6
Hma1.2p1_0819F.1_g223760 Hydrangea macrophylla HOM05D002133 ORTHO05D002256 3.4e-10 68.9 146 32.2
Lalb_Chr23g0267501 Lupinus albus HOM05D002133 ORTHO05D002256 3.4e-10 68.9 154 32.5
Solyc04g077920.3 Solanum lycopersicum HOM05D002133 ORTHO05D002256 4.4e-10 68.6 154 31.2
Sopen04g031520 Solanum pennellii HOM05D002133 ORTHO05D002256 4.4e-10 68.6 154 31.2
Glyma.14G089009 Glycine max HOM05D002133 ORTHO05D002256 5.7e-10 68.2 148 31.8
PGSC0003DMG400021507 Solanum tuberosum HOM05D002133 ORTHO05D002256 5.7e-10 68.2 154 31.2
TWI12G0489 Tripterygium wilfordii HOM05D002133 ORTHO05D002256 5.7e-10 68.2 153 33.3
VMungo0647G0922 Vigna mungo HOM05D002133 ORTHO05D002256 5.7e-10 68.2 147 33.3
Manes.18G045800 Manihot esculenta HOM05D002133 ORTHO05D002256 7.5e-10 67.8 146 30.1
Actinidia38102 Actinidia chinensis HOM05D002133 ORTHO05D002256 9.8e-10 67.4 158 29.7
Eucgr.F02256 Eucalyptus grandis HOM05D002133 ORTHO05D002256 9.8e-10 67.4 149 30.2
Glyma.04G045600 Glycine max HOM05D002133 ORTHO05D002256 1.3e-09 67.0 152 31.6
Gohir.D02G088900 Gossypium hirsutum HOM05D002133 ORTHO05D002256 1.3e-09 67.0 147 32.0
Gorai.005G099600 Gossypium raimondii HOM05D002133 ORTHO05D002256 1.3e-09 67.0 147 32.0
Sed0019340 Sechium edule HOM05D002133 ORTHO05D002256 1.3e-09 67.0 150 30.7
Aa31sc113G50 Aethionema arabicum HOM05D002133 ORTHO05D002256 1.7e-09 66.6 146 31.5
Lsat_1_v5_gn_4_131141 Lactuca sativa HOM05D002133 ORTHO05D002256 1.7e-09 66.6 150 32.0
Solyc12g088370.2 Solanum lycopersicum HOM05D002133 ORTHO05D002256 1.7e-09 66.6 150 33.3
PGSC0003DMG400011546 Solanum tuberosum HOM05D002133 ORTHO05D002256 2.2e-09 66.2 150 32.7
Ciclev10001181m.g Citrus clementina HOM05D002133 ORTHO05D002256 2.8e-09 65.9 152 34.2
Haze_22448 Corylus avellana HOM05D002133 ORTHO05D002256 2.8e-09 65.9 151 30.5
Nitab4.5_0002968g0020 Nicotiana tabacum HOM05D002133 ORTHO05D002256 2.8e-09 65.9 150 32.0
Aqoxy6G02657 Aquilegia oxysepala HOM05D002133 ORTHO05D002256 3.7e-09 65.5 147 32.7
arahy.Tifrunner.gnm1.ann1.KXTN9G Arachis hypogaea HOM05D002133 ORTHO05D002256 3.7e-09 65.5 148 30.4
Cc10_g05710 Coffea canephora HOM05D002133 ORTHO05D002256 3.7e-09 65.5 146 32.2
Thhalv10007663m.g Eutrema salsugineum HOM05D002133 ORTHO05D002256 3.7e-09 65.5 145 30.3
Psat5g039040 Pisum sativum HOM05D002133 ORTHO05D002256 3.7e-09 65.5 146 30.1
DCAR_020073 Daucus carota HOM05D002133 ORTHO05D002256 4.8e-09 65.1 147 31.3
Oeu048578.1 Olea europaea HOM05D002133 ORTHO05D002256 4.8e-09 65.1 148 31.1
CiPaw.08G049800 Carya illinoinensis HOM05D002133 ORTHO05D002256 6.3e-09 64.7 159 29.6
COL.COLO4_28515 Corchorus olitorius HOM05D002133 ORTHO05D002256 6.3e-09 64.7 160 30.6
Gohir.A02G081200 Gossypium hirsutum HOM05D002133 ORTHO05D002256 6.3e-09 64.7 147 31.3
Lalb_Chr08g0245541 Lupinus albus HOM05D002133 ORTHO05D002256 6.3e-09 64.7 148 30.4
Nitab4.5_0001298g0040 Nicotiana tabacum HOM05D002133 ORTHO05D002256 6.3e-09 64.7 132 31.8
Sp1g24010 Schrenkiella parvula HOM05D002133 ORTHO05D002256 6.3e-09 64.7 145 30.3
Sopen12g030350 Solanum pennellii HOM05D002133 ORTHO05D002256 6.3e-09 64.7 150 32.7
Atru.chr13.822 Acer truncatum HOM05D002133 ORTHO05D002256 8.3e-09 64.3 146 31.5
Duzib041G0730 Durio zibethinus HOM05D002133 ORTHO05D002256 8.3e-09 64.3 146 31.5
THA.LOC104814188 Tarenaya hassleriana HOM05D002133 ORTHO05D002256 8.3e-09 64.3 151 29.8
unitig_578.g16147 Utricularia gibba HOM05D002133 ORTHO05D002256 8.3e-09 64.3 153 30.7
HanXRQChr09g0266701 Helianthus annuus HOM05D002133 ORTHO05D002256 1.1e-08 63.9 147 30.6
Lj1g0026971 Lotus japonicus HOM05D002133 ORTHO05D002256 1.1e-08 63.9 148 31.8
Medtr3g103090 Medicago truncatula HOM05D002133 ORTHO05D002256 1.1e-08 63.9 148 31.1
TPR.G33694 Trifolium pratense HOM05D002133 ORTHO05D002256 1.1e-08 63.9 154 30.5
Aqoxy5G00879 Aquilegia oxysepala HOM05D002133 ORTHO05D002256 1.4e-08 63.5 154 31.8
CANSAT25G1442 Cannabis sativa HOM05D002133 ORTHO05D002256 1.4e-08 63.5 151 29.1
DCAR_009883 Daucus carota HOM05D002133 ORTHO05D002256 1.4e-08 63.5 147 31.3
Peaxi162Scf00003g04822 Petunia axillaris HOM05D002133 ORTHO05D002256 1.4e-08 63.5 53 50.9
THA.LOC104820516 Tarenaya hassleriana HOM05D002133 ORTHO05D002256 1.4e-08 63.5 153 30.1
arahy.Tifrunner.gnm1.ann1.68HS6I Arachis hypogaea HOM05D002133 ORTHO05D002256 1.8e-08 63.2 153 31.4
Ca_15902_v3 Cicer arietinum L. HOM05D002133 ORTHO05D002256 1.8e-08 63.2 153 31.4
Dinv04580 Davidia involucrata HOM05D002133 ORTHO05D002256 1.8e-08 63.2 131 35.9
Nitab4.5_0002314g0110 Nicotiana tabacum HOM05D002133 ORTHO05D002256 1.8e-08 63.2 150 30.7
unitig_8.g4879 Utricularia gibba HOM05D002133 ORTHO05D002256 1.8e-08 63.2 147 29.3
Potri.014G016800 Populus trichocarpa HOM05D002133 ORTHO05D002256 2.4e-08 62.8 155 30.3
Thhalv10009506m.g Eutrema salsugineum HOM05D002133 ORTHO05D002256 3.1e-08 62.4 145 29.0
arahy.Tifrunner.gnm1.ann1.C26UD9 Arachis hypogaea HOM05D002133 ORTHO05D002256 4.1e-08 62.0 153 31.4
Migut.N02776 Erythranthe guttata HOM05D002133 ORTHO05D002256 4.1e-08 62.0 147 27.9
PGR031G1293 Punica granatum HOM05D002133 ORTHO05D002256 4.1e-08 62.0 146 32.2
vmacro21437 Vaccinium macrocarpon HOM05D002133 ORTHO05D002256 4.1e-08 62.0 152 30.3
AL1G41310 Arabidopsis lyrata HOM05D002133 ORTHO05D002256 5.4e-08 61.6 145 29.0
Lalb_Chr22g0355651 Lupinus albus HOM05D002133 ORTHO05D002256 5.4e-08 61.6 148 28.4
MSTRG.24371 Avicennia marina HOM05D002133 ORTHO05D002256 7.0e-08 61.2 146 30.8
BcaB03g13968 Brassica carinata HOM05D002133 ORTHO05D002256 7.0e-08 61.2 145 28.3
ECA232G3220 Erigeron canadensis HOM05D002133 ORTHO05D002256 7.0e-08 61.2 159 29.6
Lsat_1_v5_gn_6_112361 Lactuca sativa HOM05D002133 ORTHO05D002256 7.0e-08 61.2 145 31.7
PSO541G1264 Papaver somniferum HOM05D002133 ORTHO05D002256 7.0e-08 61.2 174 30.5
BcaC06g35320 Brassica carinata HOM05D002133 ORTHO05D002256 9.1e-08 60.8 147 27.9
C07p17460 Brassica napus HOM05D002133 ORTHO05D002256 9.1e-08 60.8 147 27.9
BolC7t42251H Brassica oleracea HOM05D002133 ORTHO05D002256 9.1e-08 60.8 147 27.9
Potri.002G119100 Populus trichocarpa HOM05D002133 ORTHO05D002256 9.1e-08 60.8 146 28.1
Rhsim06G0061800 Rhododendron simsii HOM05D002133 ORTHO05D002256 9.1e-08 60.8 152 30.9
Sc15g0003510 Simmondsia chinensis HOM05D002133 ORTHO05D002256 9.1e-08 60.8 150 30.0
Solyc01g106150.1 Solanum lycopersicum HOM05D002133 ORTHO05D002256 9.1e-08 60.8 149 30.2
Sopen01g048530 Solanum pennellii HOM05D002133 ORTHO05D002256 9.1e-08 60.8 149 30.2
Oeu037500.1 Olea europaea HOM05D002133 ORTHO05D002256 1.2e-07 60.5 131 35.1
AT1G27760 Arabidopsis thaliana HOM05D002133 ORTHO05D002256 1.6e-07 60.1 145 29.0
BcaNung06154 Brassica carinata HOM05D002133 ORTHO05D002256 1.6e-07 60.1 147 29.3
C05p26460 Brassica napus HOM05D002133 ORTHO05D002256 1.6e-07 60.1 147 29.3
BolC5t31367H Brassica oleracea HOM05D002133 ORTHO05D002256 1.6e-07 60.1 142 29.6
BcaC01g01568 Brassica carinata HOM05D002133 ORTHO05D002256 2.0e-07 59.7 142 32.4
CSS0013335 Camellia sinensis var. sinensis HOM05D002133 ORTHO05D002256 2.0e-07 59.7 144 31.9
CDE04G2518 Ceratophyllum demersum HOM05D002133 ORTHO05D002256 2.0e-07 59.7 161 31.1
Thhalv10017549m.g Eutrema salsugineum HOM05D002133 ORTHO05D002256 2.0e-07 59.7 145 29.0
BcaC05g26776 Brassica carinata HOM05D002133 ORTHO05D002256 2.7e-07 59.3 147 28.6
C03p74600 Brassica napus HOM05D002133 ORTHO05D002256 2.7e-07 59.3 142 32.4
BolC3t19708H Brassica oleracea HOM05D002133 ORTHO05D002256 2.7e-07 59.3 142 32.4
CARHR027280 Cardamine hirsuta HOM05D002133 ORTHO05D002256 2.7e-07 59.3 146 27.4
Lj5g0009817 Lotus japonicus HOM05D002133 ORTHO05D002256 2.7e-07 59.3 148 31.1
Nn5g30562 Nelumbo nucifera HOM05D002133 ORTHO05D002256 2.7e-07 59.3 155 30.3
Nn8g39787 Nelumbo nucifera HOM05D002133 ORTHO05D002256 2.7e-07 59.3 117 34.2
TAR628G1204 Trochodendron aralioides HOM05D002133 ORTHO05D002256 2.7e-07 59.3 54 53.7
Peaxi162Scf00102g01358 Petunia axillaris HOM05D002133 ORTHO05D002256 3.5e-07 58.9 147 28.6
PGSC0003DMG400010671 Solanum tuberosum HOM05D002133 ORTHO05D002256 3.5e-07 58.9 146 30.1
A09p38330 Brassica napus HOM05D002133 ORTHO05D002256 4.5e-07 58.5 147 28.6
BraA09t39343Z Brassica rapa HOM05D002133 ORTHO05D002256 4.5e-07 58.5 147 28.6
ECA246G5024 Erigeron canadensis HOM05D005986 ORTHO05D007467 4.5e-07 58.5 138 32.6
PSO675G0857 Papaver somniferum HOM05D002133 ORTHO05D002256 4.5e-07 58.5 167 28.7
TWI56G0614 Tripterygium wilfordii HOM05D002133 ORTHO05D002256 4.5e-07 58.5 153 31.4
BcaB08g34833 Brassica carinata HOM05D002133 ORTHO05D002256 5.9e-07 58.2 151 29.1
BraA08t34556Z Brassica rapa HOM05D002133 ORTHO05D002256 5.9e-07 58.2 142 32.4
Carub.0001s2628 Capsella rubella HOM05D002133 ORTHO05D002256 5.9e-07 58.2 145 28.3
Thhalv10001793m.g Eutrema salsugineum HOM05D002133 ORTHO05D002256 5.9e-07 58.2 148 30.4
Thhalv10017670m.g Eutrema salsugineum HOM05D002133 ORTHO05D002256 5.9e-07 58.2 145 28.3
HanXRQChr06g0175321 Helianthus annuus HOM05D002133 ORTHO05D002256 5.9e-07 58.2 51 51.0
CDE02G2866 Ceratophyllum demersum HOM05D002133 ORTHO05D002256 7.7e-07 57.8 154 28.6
Dinv39230 Davidia involucrata HOM05D002133 ORTHO05D002256 1.0e-06 57.4 146 29.5
Lj4A70G38 Lonicera japonica HOM05D002133 ORTHO05D002256 1.3e-06 57.0 160 28.1
Peaxi162Scf00017g02838 Petunia axillaris HOM05D002133 ORTHO05D002256 1.3e-06 57.0 147 29.3
Aqoxy1G02669 Aquilegia oxysepala HOM05D002133 ORTHO05D002256 1.7e-06 56.6 137 27.0
BcaC01g01569 Brassica carinata HOM05D002133 ORTHO05D002256 1.7e-06 56.6 150 28.0
A08p26060 Brassica napus HOM05D002133 ORTHO05D002256 1.7e-06 56.6 142 31.7
Cpa.g.sc142.18 Carica papaya HOM05D002133 ORTHO05D002256 1.7e-06 56.6 146 27.4
HanXRQChr01g0027951 Helianthus annuus HOM05D002133 ORTHO05D002256 1.7e-06 56.6 138 31.2
Nitab4.5_0005301g0030 Nicotiana tabacum HOM05D002133 ORTHO05D002256 1.7e-06 56.6 138 31.2
MSTRG.22223 Avicennia marina HOM05D002133 ORTHO05D002256 2.3e-06 56.2 151 31.1
CSS0038052 Camellia sinensis var. sinensis HOM05D002133 ORTHO05D002256 2.3e-06 56.2 145 27.6
PSO017G4718 Papaver somniferum HOM05D002133 ORTHO05D002256 2.3e-06 56.2 144 29.9
PSO170G0233 Papaver somniferum HOM05D002133 ORTHO05D002256 2.3e-06 56.2 144 29.9
GSVIVG01009354001 Vitis vinifera HOM05D002133 ORTHO05D002256 2.9e-06 55.8 152 30.9
Hund24035 Selenicereus undatus HOM05D002133 ORTHO05D002256 5.0e-06 55.1 148 29.1
CSS0028243 Camellia sinensis var. sinensis HOM05D002133 ORTHO05D002256 6.6e-06 54.7 152 28.9
Manes.05G181400 Manihot esculenta HOM05D002133 ORTHO05D002256 6.6e-06 54.7 149 28.2
ECA246G3335 Erigeron canadensis HOM05D002133 ORTHO05D002256 8.6e-06 54.3 122 31.1
Thecc.02G116500 Theobroma cacao HOM05D002133 ORTHO05D002256 8.6e-06 54.3 163 31.3


User provided reference genes

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