Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.2678 Avicennia marina HOM05D005030 ORTHO05D006490 0.0e+00 1519.2 772 100.0
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 2.8e-287 991.9 727 71.8
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 1.8e-273 946.0 754 67.1
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 4.8e-263 911.4 747 67.5
Hma1.2p1_0006F.1_g004750 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 2.5e-251 872.5 757 62.7
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 7.9e-250 867.5 725 65.2
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 3.3e-248 862.1 692 66.3
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 6.9e-246 854.4 714 64.1
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 9.4e-243 844.0 680 65.9
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 1.0e-241 840.5 732 63.4
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 2.3e-241 839.3 726 63.4
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 3.9e-241 838.6 685 65.8
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 2.6e-240 835.9 716 63.0
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 1.2e-237 827.0 705 63.4
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 1.7e-236 823.2 735 61.2
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 3.8e-236 822.0 684 64.2
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 3.8e-236 822.0 738 61.8
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 2.5e-235 819.3 695 64.0
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 1.2e-234 817.0 703 62.0
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 1.6e-234 816.6 718 62.4
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 1.0e-233 813.9 685 64.8
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 2.6e-232 809.3 680 63.4
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 1.1e-230 803.9 684 64.3
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 1.0e-228 797.3 705 61.6
Solyc11g005690.3 Solanum lycopersicum HOM05D005030 ORTHO05D006490 1.5e-227 793.5 705 61.4
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 3.6e-226 788.9 681 62.4
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 2.0e-224 783.1 685 62.3
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 5.7e-224 781.6 683 63.1
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 8.5e-220 767.7 704 59.9
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 8.0e-218 761.1 728 58.7
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 2.0e-216 756.5 765 56.1
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 3.1e-214 749.2 687 60.0
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 7.0e-214 748.0 692 60.5
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 7.7e-213 744.6 709 58.3
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 2.8e-210 736.1 676 59.6
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 2.8e-210 736.1 707 56.3
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 4.4e-208 728.8 699 59.5
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 1.1e-206 724.2 672 58.9
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 1.8e-206 723.4 682 57.8
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 2.4e-206 723.0 687 58.7
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 7.0e-206 721.5 740 55.1
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 5.9e-205 718.4 678 57.7
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 3.9e-204 715.7 703 57.2
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 3.9e-204 715.7 680 56.9
SHI11439 Sapria himalayana HOM05D005030 ORTHO05D006490 1.6e-202 710.3 714 56.0
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 3.1e-201 706.1 739 54.7
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 4.4e-200 702.2 642 59.2
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 1.7e-199 700.3 735 54.3
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 8.3e-199 698.0 687 56.5
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 9.2e-198 694.5 690 55.2
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 5.0e-196 688.7 744 53.5
Cpa.g.sc42.107 Carica papaya HOM05D005030 ORTHO05D006490 2.1e-194 683.3 613 61.8
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 4.7e-194 682.2 673 56.9
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 4.7e-194 682.2 639 58.1
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 8.1e-194 681.4 702 56.4
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 2.3e-193 679.9 728 52.9
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 2.3e-193 679.9 653 56.5
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 4.4e-192 675.6 695 54.7
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 2.2e-191 673.3 709 54.4
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 1.4e-190 670.6 711 54.0
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 1.3e-188 664.1 677 56.7
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 6.6e-188 661.8 703 52.5
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 1.1e-187 661.0 632 57.0
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 1.5e-187 660.6 705 53.5
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 3.3e-187 659.4 678 53.5
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 5.6e-187 658.7 619 57.5
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 7.3e-187 658.3 677 56.0
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 9.5e-187 657.9 678 55.8
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 9.5e-187 657.9 703 52.3
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 9.5e-187 657.9 653 55.0
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 2.8e-186 656.4 676 55.2
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 8.1e-186 654.8 705 52.1
CiPaw.03G127100 Carya illinoinensis HOM05D005030 ORTHO05D006490 3.1e-185 652.9 475 69.9
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 8.9e-185 651.4 703 51.9
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 1.3e-183 647.5 633 55.8
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 1.3e-183 647.5 679 54.5
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 1.7e-183 647.1 637 56.5
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 2.2e-183 646.7 706 55.2
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 3.7e-183 646.0 633 55.6
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 3.2e-182 642.9 679 54.1
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 4.1e-182 642.5 632 54.9
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 5.4e-182 642.1 634 56.0
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 3.5e-181 639.4 639 55.2
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 3.5e-181 639.4 639 55.2
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 3.5e-181 639.4 639 55.2
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 6.0e-181 638.6 633 55.3
CiPaw.03G127600 Carya illinoinensis HOM05D005030 ORTHO05D006490 3.0e-180 636.3 488 67.6
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 1.1e-179 634.4 743 51.4
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 1.5e-179 634.0 635 54.8
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 1.5e-179 634.0 516 62.6
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 2.5e-179 633.3 689 52.8
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 1.6e-178 630.6 634 55.7
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 1.1e-177 627.9 632 53.8
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 5.2e-177 625.5 616 56.2
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 2.1e-173 613.6 679 52.6
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 8.1e-170 601.7 682 51.6
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 6.9e-169 598.6 637 53.2
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 7.1e-166 588.6 616 52.8
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 7.9e-165 585.1 710 50.0
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 2.4e-161 573.5 635 52.0
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 4.0e-153 546.2 608 53.0
Haze_25140 Corylus avellana HOM05D005030 ORTHO05D006490 6.0e-149 532.3 352 75.6
SEGI_29284 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 6.3e-146 522.3 534 50.2
MD17G1248700 Malus domestica HOM05D005030 ORTHO05D000105 8.5e-135 485.3 350 70.6
CDE08G0761 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 2.1e-133 480.7 353 68.3
EL10Ac6g15267 Beta vulgaris HOM05D005030 ORTHO05D006490 2.1e-125 454.1 496 53.4
SEGI_07118 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 7.7e-112 409.1 416 49.8
TAR381G0402 Trochodendron aralioides HOM05D005030 ORTHO05D006490 3.6e-109 400.2 416 54.8
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 9.1e-105 385.6 508 43.1
AagrBONN_evm.TU.Sc2ySwM_228.5700 Anthoceros agrestis HOM05D005030 ORTHO05D006490 1.4e-97 361.7 647 36.5
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 1.8e-97 361.3 537 37.8
ECA234G2315 Erigeron canadensis HOM05D005030 ORTHO05D006490 9.5e-94 349.0 440 44.3
SEGI_25247 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 3.4e-83 313.9 345 47.5
FAN23G1614 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.0e-71 275.8 351 46.7
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 5.8e-67 260.0 497 33.2
ECA234G1901 Erigeron canadensis HOM05D005030 ORTHO05D006490 8.7e-47 193.0 299 39.5
vmacro12843 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 3.4e-43 181.0 204 53.4
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 1.9e-41 175.3 281 43.4
TAR625G0665 Trochodendron aralioides HOM05D005030 ORTHO05D006490 4.2e-41 174.1 116 73.3
CBR_g36663 Chara braunii HOM05D005030 ORTHO05D006490 3.2e-33 147.9 697 24.4
CBR_g61481 Chara braunii HOM05D005030 ORTHO05D001575 1.8e-31 142.1 379 30.9
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 1.9e-25 122.1 235 38.7
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 7.4e-22 110.2 94 56.4
TAR376G0117 Trochodendron aralioides HOM05D005030 ORTHO05D006490 4.8e-21 107.5 134 48.5
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 3.8e-18 97.8 118 44.9
SEGI_13008 Sequoiadendron giganteum HOM05D005030 ORTHO05D050943 9.4e-17 93.2 112 42.9
CiPaw.03G127200 Carya illinoinensis HOM05D005030 ORTHO05D006490 6.5e-10 70.5 210 30.5
TAR625G0866 Trochodendron aralioides HOM05D005030 ORTHO05D006490 8.8e-07 60.1 39 76.9
MBI19_g06116_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D036548 1.5e-06 59.3 39 69.2


User provided reference genes

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