Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.8e-187 659.1 325 100.0
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 2.1e-151 539.3 302 84.1
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 2.7e-151 538.9 301 85.4
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.5e-149 533.1 302 83.1
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 5.7e-149 531.2 308 82.1
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 3.7e-148 528.5 305 82.3
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 4.8e-148 528.1 303 82.5
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 1.1e-147 526.9 308 81.8
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 2.4e-147 525.8 300 82.7
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 4.1e-147 525.0 308 81.5
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 2.6e-146 522.3 308 81.2
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 4.5e-146 521.5 337 77.4
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 5.9e-146 521.2 284 84.9
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 1.0e-145 520.4 302 80.8
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 2.9e-145 518.8 307 80.8
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 6.5e-145 517.7 302 80.8
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.4e-144 516.5 303 78.2
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.4e-144 516.5 303 78.2
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 1.4e-144 516.5 296 80.7
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 1.9e-144 516.2 304 80.9
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 3.2e-144 515.4 303 78.9
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 4.2e-144 515.0 303 77.9
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 7.2e-144 514.2 302 80.8
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 9.4e-144 513.8 303 77.6
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 1.6e-143 513.1 302 78.8
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 2.1e-143 512.7 303 77.6
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 2.7e-143 512.3 299 79.9
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 3.6e-143 511.9 312 78.5
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 6.1e-143 511.1 303 80.2
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 6.1e-143 511.1 304 79.3
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 6.1e-143 511.1 302 81.1
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 1.0e-142 510.4 298 79.9
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 1.8e-142 509.6 298 80.2
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.3e-142 509.2 301 79.4
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 3.9e-142 508.4 302 78.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 6.7e-142 507.7 353 72.0
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 2.0e-141 506.1 301 79.1
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 7.4e-141 504.2 298 77.5
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 7.4e-141 504.2 301 79.1
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 1.7e-140 503.1 303 77.9
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 6.3e-140 501.1 303 76.2
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 6.3e-140 501.1 321 77.3
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.1e-139 500.4 303 77.6
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.1e-139 500.4 304 78.0
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 1.4e-139 500.0 299 79.6
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 1.8e-139 499.6 293 80.5
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 2.4e-139 499.2 296 78.4
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 4.1e-139 498.4 302 78.1
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 1.5e-138 496.5 320 75.3
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 2.0e-138 496.1 302 77.8
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 2.0e-138 496.1 302 77.8
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 2.6e-138 495.7 297 78.5
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 3.4e-138 495.4 307 77.9
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 4.5e-138 495.0 318 73.6
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 4.5e-138 495.0 304 76.6
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 2.2e-137 492.7 303 79.2
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 2.9e-137 492.3 298 75.2
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 2.3e-134 482.6 324 72.2
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 3.3e-133 478.8 277 79.4
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 5.7e-133 478.0 290 78.3
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 7.4e-133 477.6 302 73.5
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 1.7e-132 476.5 302 73.5
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 2.8e-132 475.7 302 74.2
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 6.3e-132 474.6 300 72.3
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.4e-131 473.4 298 74.8
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 2.4e-131 472.6 305 72.1
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 3.1e-131 472.2 301 76.4
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 4.1e-131 471.9 308 72.4
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 5.3e-131 471.5 293 73.0
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 5.3e-131 471.5 296 73.0
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 5.3e-131 471.5 293 73.0
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 2.0e-130 469.5 289 75.4
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 2.0e-130 469.5 289 75.4
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 2.0e-130 469.5 303 72.9
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 3.5e-130 468.8 297 74.4
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 3.5e-130 468.8 263 81.7
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 5.9e-130 468.0 289 75.1
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.0e-129 467.2 289 75.1
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.0e-129 467.2 289 75.1
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.3e-129 466.8 301 70.4
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 3.8e-129 465.3 293 72.7
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 4.2e-128 461.8 301 69.1
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 1.2e-127 460.3 302 72.2
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 1.6e-127 459.9 293 72.4
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 3.0e-126 455.7 293 73.4
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 1.5e-125 453.4 314 69.1
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 5.7e-125 451.4 298 72.5
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 7.5e-125 451.1 292 70.9
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 1.1e-123 447.2 302 67.5
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 5.3e-123 444.9 293 72.4
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 3.5e-122 442.2 300 72.0
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 6.8e-118 427.9 268 71.6
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 5.0e-113 411.8 296 67.2
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 5.2e-102 375.2 288 60.4
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 3.4e-101 372.5 308 58.4
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 2.2e-100 369.8 224 75.9
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 1.1e-96 357.5 305 58.7
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 3.1e-94 349.4 202 82.2
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 8.9e-94 347.8 202 79.2
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 2.0e-93 346.7 287 58.9
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 2.6e-85 319.7 192 75.5
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.3e-76 290.8 187 72.2
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 2.1e-71 273.5 170 77.6
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 4.7e-71 272.3 259 52.9
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 4.4e-69 265.8 144 84.0
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 2.7e-58 229.9 151 70.9
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 3.6e-55 219.5 150 70.7
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 9.3e-51 204.9 142 71.8
CAN.G298.53 Capsicum annuum HOM05D006814 ORTHO05D008613 4.0e-46 189.5 114 78.9
CAN.G298.50 Capsicum annuum HOM05D006814 ORTHO05D008613 8.4e-44 181.8 105 81.0
CAN.G2435.1 Capsicum annuum HOM05D006814 ORTHO05D008613 3.6e-34 149.8 88 80.7
Actinidia25984 Actinidia chinensis HOM05D006814 ORTHO05D008613 3.7e-31 139.8 99 70.7
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 1.2e-26 124.8 117 56.4
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 3.0e-25 120.2 336 26.2
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 3.0e-25 120.2 73 75.3
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 5.7e-24 115.9 66 81.8
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 1.7e-23 114.4 332 27.1
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 3.7e-23 113.2 297 27.3
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 6.5e-12 75.9 41 82.9


User provided reference genes

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