Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.24142 Avicennia marina HOM05D003677 ORTHO05D004231 2.2e-68 262.3 145 100.0
MSTRG.24694 Avicennia marina HOM05D003677 ORTHO05D004231 1.2e-55 219.9 138 84.8
SGA_v2.0_scaffold28G12049 Striga asiatica HOM05D003677 ORTHO05D004231 1.4e-46 189.9 138 74.6
Migut.F01271 Erythranthe guttata HOM05D003677 ORTHO05D004231 1.5e-45 186.4 138 71.0
Oeu039587.1 Olea europaea HOM05D003677 ORTHO05D004231 2.0e-45 186.0 140 70.0
Oeu002000.1 Olea europaea HOM05D003677 ORTHO05D004231 2.3e-41 172.6 134 71.6
Dinv24683 Davidia involucrata HOM05D003677 ORTHO05D004231 4.0e-38 161.8 150 62.7
Dinv35470 Davidia involucrata HOM05D003677 ORTHO05D004231 5.3e-38 161.4 156 61.5
Cfa006347 Carpinus fangiana HOM05D003677 ORTHO05D004231 2.0e-37 159.5 144 61.8
Haze_04435 Corylus avellana HOM05D003677 ORTHO05D004231 2.0e-37 159.5 144 61.8
Actinidia34752 Actinidia chinensis HOM05D003677 ORTHO05D004231 9.9e-37 157.1 142 64.8
unitig_61.g26069 Utricularia gibba HOM05D003677 ORTHO05D004231 9.9e-37 157.1 133 73.7
Actinidia38938 Actinidia chinensis HOM05D003677 ORTHO05D004231 1.4e-35 153.3 142 65.5
Ciclev10021882m.g Citrus clementina HOM05D003677 ORTHO05D004231 1.4e-35 153.3 139 62.6
FAN05G3813 Fragaria x ananassa HOM05D003677 ORTHO05D004231 1.4e-35 153.3 139 65.5
Gohir.A11G247500 Gossypium hirsutum HOM05D003677 ORTHO05D004231 3.2e-35 152.1 140 60.0
Cc02_g08860 Coffea canephora HOM05D003677 ORTHO05D004231 4.2e-35 151.8 118 73.7
Gohir.D11G257800 Gossypium hirsutum HOM05D003677 ORTHO05D004231 4.2e-35 151.8 140 59.3
Gorai.007G276100 Gossypium raimondii HOM05D003677 ORTHO05D004231 4.2e-35 151.8 140 59.3
PGR004G1803 Punica granatum HOM05D003677 ORTHO05D004231 4.2e-35 151.8 142 61.3
CiPaw.02G020400 Carya illinoinensis HOM05D003677 ORTHO05D004231 7.1e-35 151.0 124 69.4
Nitab4.5_0003780g0080 Nicotiana tabacum HOM05D003677 ORTHO05D004231 7.1e-35 151.0 138 63.8
Sabra13G0042900 Salix brachista HOM05D003677 ORTHO05D004231 9.3e-35 150.6 143 65.0
Atru.chr4.2875 Acer truncatum HOM05D003677 ORTHO05D004231 1.2e-34 150.2 142 60.6
CANSAT54G2642 Cannabis sativa HOM05D003677 ORTHO05D004231 1.2e-34 150.2 125 67.2
EL10Ac4g09010 Beta vulgaris HOM05D003677 ORTHO05D004231 1.6e-34 149.8 145 60.0
ClCG11G010570 Citrullus lanatus HOM05D003677 ORTHO05D004231 2.7e-34 149.1 142 59.9
CsaV3_2G009740 Cucumis sativus L. HOM05D003677 ORTHO05D004231 2.7e-34 149.1 142 60.6
Hund22161 Selenicereus undatus HOM05D003677 ORTHO05D004231 3.5e-34 148.7 144 61.1
Atru.chr2.953 Acer truncatum HOM05D003677 ORTHO05D004231 4.6e-34 148.3 117 70.9
Peaxi162Scf00528g00119 Petunia axillaris HOM05D003677 ORTHO05D004231 4.6e-34 148.3 138 62.3
Gorai.013G187700 Gossypium raimondii HOM05D003677 ORTHO05D004231 6.0e-34 147.9 141 60.3
Lj2A42G39 Lonicera japonica HOM05D003677 ORTHO05D004231 6.0e-34 147.9 159 58.5
TWI81G0231 Tripterygium wilfordii HOM05D003677 ORTHO05D004231 7.9e-34 147.5 139 60.4
Sc20g0000650 Simmondsia chinensis HOM05D003677 ORTHO05D004231 1.0e-33 147.1 150 62.7
Nn3g19689 Nelumbo nucifera HOM05D003677 ORTHO05D004231 1.3e-33 146.7 146 58.9
Potri.013G046900 Populus trichocarpa HOM05D003677 ORTHO05D004231 1.3e-33 146.7 146 61.6
Sopen04g005150 Solanum pennellii HOM05D003677 ORTHO05D004231 1.3e-33 146.7 144 61.1
Cc11_g04280 Coffea canephora HOM05D003677 ORTHO05D004231 1.8e-33 146.4 122 70.5
Gohir.A13G167400 Gossypium hirsutum HOM05D003677 ORTHO05D004231 2.3e-33 146.0 141 61.0
Solyc04g010000.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 2.3e-33 146.0 144 61.1
Atru.chr2.976 Acer truncatum HOM05D003677 ORTHO05D004231 3.0e-33 145.6 117 69.2
Manes.09G148000 Manihot esculenta HOM05D003677 ORTHO05D004231 3.9e-33 145.2 140 60.0
Potri.019G018900 Populus trichocarpa HOM05D003677 ORTHO05D004231 5.1e-33 144.8 140 62.9
FAN09G1189 Fragaria x ananassa HOM05D003677 ORTHO05D004231 6.7e-33 144.4 139 61.9
Nn1g02804 Nelumbo nucifera HOM05D003677 ORTHO05D004231 1.1e-32 143.7 155 58.1
Hma1.2p1_1512F.1_g287960 Hydrangea macrophylla HOM05D003677 ORTHO05D004231 1.5e-32 143.3 125 68.0
Hund06908 Selenicereus undatus HOM05D003677 ORTHO05D004231 1.5e-32 143.3 143 61.5
Cpa.g.c35686 Carica papaya HOM05D003677 ORTHO05D004231 2.5e-32 142.5 120 69.2
Sopen04g005130 Solanum pennellii HOM05D003677 ORTHO05D004231 3.3e-32 142.1 144 57.6
Sed0020318 Sechium edule HOM05D003677 ORTHO05D004231 4.3e-32 141.7 131 62.6
Nitab4.5_0001372g0020 Nicotiana tabacum HOM05D003677 ORTHO05D004231 5.6e-32 141.4 123 65.0
Sopen04g005170 Solanum pennellii HOM05D003677 ORTHO05D004231 2.1e-31 139.4 119 60.5
COL.COLO4_15475 Corchorus olitorius HOM05D003677 ORTHO05D004231 3.7e-31 138.7 143 58.7
FAN02G0354 Fragaria x ananassa HOM05D000329 ORTHO05D000833 4.8e-31 138.3 139 61.2
RcHm_v2.0_Chr3g0449621 Rosa chinensis HOM05D003677 ORTHO05D004231 4.8e-31 138.3 140 60.7
CDE04G2392 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 1.1e-30 137.1 137 61.3
Duzib106G0879 Durio zibethinus HOM05D003677 ORTHO05D004231 1.1e-30 137.1 137 57.7
TAR633G1327 Trochodendron aralioides HOM05D003677 ORTHO05D004231 1.4e-30 136.7 135 59.3
Solyc04g010040.3 Solanum lycopersicum HOM05D003677 ORTHO05D004231 3.1e-30 135.6 115 65.2
Lsat_1_v5_gn_2_16040 Lactuca sativa HOM05D003677 ORTHO05D004231 4.0e-30 135.2 137 59.1
CSS0027708 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 5.3e-30 134.8 129 59.7
CSS0028631 Camellia sinensis var. sinensis HOM05D003677 ORTHO05D004231 5.3e-30 134.8 129 59.7
GSVIVG01016104001 Vitis vinifera HOM05D003677 ORTHO05D004231 6.9e-30 134.4 102 72.5
DCAR_009653 Daucus carota HOM05D003677 ORTHO05D004231 9.0e-30 134.0 147 56.5
vmacro10364 Vaccinium macrocarpon HOM05D003677 ORTHO05D004231 1.2e-29 133.7 174 51.7
Duzib128G0961 Durio zibethinus HOM05D003677 ORTHO05D004231 1.5e-29 133.3 140 62.1
Rhsim09G0137200 Rhododendron simsii HOM05D003677 ORTHO05D004231 1.5e-29 133.3 157 56.1
Thecc.05G271100 Theobroma cacao HOM05D003677 ORTHO05D004231 2.0e-29 132.9 137 55.5
Migut.I00390 Erythranthe guttata HOM05D003677 ORTHO05D004231 3.4e-29 132.1 122 60.7
Glyma.20G223000 Glycine max HOM05D003677 ORTHO05D004231 3.4e-29 132.1 143 56.6
QL03p030537 Quercus lobata HOM05D003677 ORTHO05D004231 3.4e-29 132.1 196 44.9
Psat6g142680 Pisum sativum HOM05D003677 ORTHO05D004231 4.5e-29 131.7 142 59.2
Medtr1g080150 Medicago truncatula HOM05D003677 ORTHO05D004231 5.8e-29 131.3 145 55.2
Nitab4.5_0010738g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 9.9e-29 130.6 122 63.1
PGSC0003DMG400023407 Solanum tuberosum HOM05D003677 ORTHO05D004231 9.9e-29 130.6 123 61.8
Aa31LG5G14940 Aethionema arabicum HOM05D003677 ORTHO05D004231 1.3e-28 130.2 102 66.7
AUR62004836 Chenopodium quinoa HOM05D003677 ORTHO05D004231 1.7e-28 129.8 144 56.2
PSO210G7560 Papaver somniferum HOM05D003677 ORTHO05D004231 1.7e-28 129.8 144 56.9
CDE07G1504 Ceratophyllum demersum HOM05D003677 ORTHO05D004231 2.2e-28 129.4 112 70.5
TAR362G0866 Trochodendron aralioides HOM05D003677 ORTHO05D004231 2.2e-28 129.4 153 54.2
PSO832G1483 Papaver somniferum HOM05D003677 ORTHO05D004231 2.9e-28 129.0 143 56.6
TPR.G9915 Trifolium pratense HOM05D003677 ORTHO05D004231 3.8e-28 128.6 143 56.6
HPP92_002516 Vanilla planifolia HOM05D003677 ORTHO05D004231 3.8e-28 128.6 98 70.4
HPP92_002535 Vanilla planifolia HOM05D003677 ORTHO05D004231 3.8e-28 128.6 98 70.4
THA.LOC104827474 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 4.9e-28 128.3 139 55.4
GSVIVG01023509001 Vitis vinifera HOM05D003677 ORTHO05D004231 4.9e-28 128.3 70 91.4
ATR0736G218 Amborella trichopoda HOM05D003677 ORTHO05D004231 8.4e-28 127.5 86 77.9
arahy.Tifrunner.gnm1.ann1.U10W7S Arachis hypogaea HOM05D003677 ORTHO05D004231 8.4e-28 127.5 129 60.5
Gohir.D13G172900 Gossypium hirsutum HOM05D003677 ORTHO05D004231 8.4e-28 127.5 80 80.0
Nitab4.5_0000687g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 8.4e-28 127.5 142 59.2
MD04G1229900 Malus domestica HOM05D003677 ORTHO05D004231 1.1e-27 127.1 139 59.7
Aqoxy5G00213 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 1.4e-27 126.7 125 58.4
Lj5g0022615 Lotus japonicus HOM05D003677 ORTHO05D004231 4.2e-27 125.2 138 57.2
MD12G1247000 Malus domestica HOM05D003677 ORTHO05D004231 4.2e-27 125.2 139 59.0
MD12G1247300 Malus domestica HOM05D003677 ORTHO05D004231 4.2e-27 125.2 139 59.0
PSO210G0146 Papaver somniferum HOM05D003677 ORTHO05D004231 4.2e-27 125.2 120 62.5
ECA238G1929 Erigeron canadensis HOM05D003677 ORTHO05D004231 5.5e-27 124.8 115 58.3
Lsat_1_v5_gn_1_9200 Lactuca sativa HOM05D003677 ORTHO05D004231 5.5e-27 124.8 124 59.7
MBI07_g16912_MAGBIO Magnolia biondii HOM05D003677 ORTHO05D004231 5.5e-27 124.8 138 54.3
Nitab4.5_0002915g0010 Nicotiana tabacum HOM05D003677 ORTHO05D004231 9.3e-27 124.0 139 66.9
PSO210G2652 Papaver somniferum HOM05D003677 ORTHO05D004231 9.3e-27 124.0 120 61.7
THA.LOC104802833 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 9.3e-27 124.0 123 60.2
Lalb_Chr02g0149101 Lupinus albus HOM05D003677 ORTHO05D004231 1.2e-26 123.6 142 58.5
Glyma.10G166200 Glycine max HOM05D003677 ORTHO05D004231 1.6e-26 123.2 143 53.1
VMungo0720G1875 Vigna mungo HOM05D003677 ORTHO05D004231 1.6e-26 123.2 142 53.5
arahy.Tifrunner.gnm1.ann1.5GL5JK Arachis hypogaea HOM05D003677 ORTHO05D004231 2.1e-26 122.9 126 60.3
SEGI_18661 Sequoiadendron giganteum HOM05D003677 ORTHO05D004231 2.1e-26 122.9 78 82.1
Eucgr.H04231 Eucalyptus grandis HOM05D003677 ORTHO05D004231 2.7e-26 122.5 160 48.8
Phvul.008G151836 Phaseolus vulgaris HOM05D003677 ORTHO05D004231 3.5e-26 122.1 142 52.8
Nitab4.5_0000718g0030 Nicotiana tabacum HOM05D003677 ORTHO05D004231 6.0e-26 121.3 123 64.2
Peaxi162Scf00015g00308 Petunia axillaris HOM05D003677 ORTHO05D004231 6.0e-26 121.3 119 57.1
AagrBONN_evm.TU.Sc2ySwM_228.2901 Anthoceros agrestis HOM05D003677 ORTHO05D004231 1.0e-25 120.6 119 58.8
Ca_10015_v3 Cicer arietinum L. HOM05D003677 ORTHO05D004231 1.0e-25 120.6 138 52.2
AL3G14510 Arabidopsis lyrata HOM05D003677 ORTHO05D004231 1.3e-25 120.2 129 57.4
Zm00001eb185100 Zea mays HOM05D003677 ORTHO05D004231 2.3e-25 119.4 120 53.3
Peaxi162Scf00152g00828 Petunia axillaris HOM05D003677 ORTHO05D004231 3.0e-25 119.0 146 52.7
Pp3c23_14650 Physcomitrium patens HOM05D003677 ORTHO05D004231 3.9e-25 118.6 165 47.9
AT3G04500 Arabidopsis thaliana HOM05D003677 ORTHO05D004231 5.1e-25 118.2 129 58.1
Prupe.6G350000 Prunus persica HOM05D003677 ORTHO05D004231 5.1e-25 118.2 69 87.0
BcaC05g29937 Brassica carinata HOM05D003677 ORTHO05D004231 6.7e-25 117.9 127 57.5
C05p62750 Brassica napus HOM05D003677 ORTHO05D004231 6.7e-25 117.9 127 57.5
BolC5t34928H Brassica oleracea HOM05D003677 ORTHO05D004231 6.7e-25 117.9 127 57.5
HanXRQChr04g0108621 Helianthus annuus HOM05D003677 ORTHO05D004231 1.5e-24 116.7 80 77.5
THA.LOC104805782 Tarenaya hassleriana HOM05D003677 ORTHO05D004231 1.5e-24 116.7 127 57.5
Sp3g03350 Schrenkiella parvula HOM05D003677 ORTHO05D004231 1.9e-24 116.3 84 71.4
ClCG06G009560 Citrullus lanatus HOM05D003677 ORTHO05D004231 4.3e-24 115.2 125 56.8
A05p42980 Brassica napus HOM05D003677 ORTHO05D004231 9.6e-24 114.0 124 55.6
BraA05t23042Z Brassica rapa HOM05D003677 ORTHO05D004231 9.6e-24 114.0 145 53.8
TPR.G22331 Trifolium pratense HOM05D003677 ORTHO05D004231 1.3e-23 113.6 138 50.0
Glyma.11G011000 Glycine max HOM05D003677 ORTHO05D004231 1.6e-23 113.2 139 49.6
Migut.I00391 Erythranthe guttata HOM05D003677 ORTHO05D004231 2.1e-23 112.8 86 69.8
FvH4_6g01880 Fragaria vesca HOM05D003677 ORTHO05D004231 2.1e-23 112.8 138 52.2
FAN14G1798 Fragaria x ananassa HOM05D003677 ORTHO05D004231 2.1e-23 112.8 138 52.2
FAN14G5891 Fragaria x ananassa HOM05D003677 ORTHO05D004231 2.1e-23 112.8 138 52.2
HanXRQChr13g0397681 Helianthus annuus HOM05D003677 ORTHO05D004231 2.1e-23 112.8 106 66.0
Sopen05g033470 Solanum pennellii HOM05D003677 ORTHO05D004231 2.8e-23 112.5 120 57.5
CAN.G1465.9 Capsicum annuum HOM05D003677 ORTHO05D004231 3.7e-23 112.1 123 52.8
CARHR078690 Cardamine hirsuta HOM05D003677 ORTHO05D004231 4.8e-23 111.7 100 65.0
Lj4g0016038 Lotus japonicus HOM05D003677 ORTHO05D004231 6.2e-23 111.3 124 57.3
Mapoly0213s0004 Marchantia polymorpha HOM05D003677 ORTHO05D004231 1.1e-22 110.5 150 44.7
Solyc05g055010.4 Solanum lycopersicum HOM05D003677 ORTHO05D004231 1.8e-22 109.8 110 59.1
Thhalv10021407m.g Eutrema salsugineum HOM05D003677 ORTHO05D004231 4.0e-22 108.6 79 70.9
DCAR_024364 Daucus carota HOM05D003677 ORTHO05D004231 9.0e-22 107.5 68 82.4
Os02g0622500 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 1.2e-21 107.1 127 49.6
AUR62040925 Chenopodium quinoa HOM05D003677 ORTHO05D004231 2.0e-21 106.3 59 86.4
Lalb_Chr16g0386451 Lupinus albus HOM05D003677 ORTHO05D004231 2.6e-21 105.9 122 50.8
FAN05G1443 Fragaria x ananassa HOM05D003677 ORTHO05D004231 5.8e-21 104.8 138 48.6
BcaC01g04372 Brassica carinata HOM05D003677 ORTHO05D004231 7.6e-21 104.4 60 83.3
Carub.0003s0366 Capsella rubella HOM05D003677 ORTHO05D004231 7.6e-21 104.4 117 53.8
Nitab4.5_0003780g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 7.6e-21 104.4 139 51.1
Zm00001eb108490 Zea mays HOM05D003677 ORTHO05D004231 6.5e-20 101.3 124 50.8
Os08g0567200 Oryza sativa ssp. japonica HOM05D003677 ORTHO05D004231 2.7e-18 95.9 126 48.4
Lalb_Chr09g0329801 Lupinus albus HOM05D003677 ORTHO05D004231 3.5e-18 95.5 59 74.6
arahy.Tifrunner.gnm1.ann1.64W5EF Arachis hypogaea HOM05D003677 ORTHO05D004231 1.8e-17 93.2 117 46.2
C03p40840 Brassica napus HOM05D003677 ORTHO05D004231 1.8e-17 93.2 55 81.8
SMO367G0071 Selaginella moellendorffii HOM05D003677 ORTHO05D004231 5.1e-17 91.7 60 75.0
CBR_g52330 Chara braunii HOM05D003677 ORTHO05D004231 1.5e-16 90.1 75 64.0
BcaC05g30193 Brassica carinata HOM05D003677 ORTHO05D004231 3.3e-16 89.0 127 49.6
Zm00001eb326740 Zea mays HOM05D003677 ORTHO05D004231 2.2e-15 86.3 120 45.8
Aqoxy2G03669 Aquilegia oxysepala HOM05D003677 ORTHO05D004231 2.4e-14 82.8 110 49.1
BolC3t16355H Brassica oleracea HOM05D003677 ORTHO05D004231 7.7e-13 77.8 45 80.0
Dinv36116 Davidia involucrata HOM05D003677 ORTHO05D004231 3.2e-11 72.4 131 44.3
arahy.Tifrunner.gnm1.ann1.UY3EWL Arachis hypogaea HOM05D003677 ORTHO05D004231 1.1e-08 63.9 40 65.0
Nitab4.5_0006737g0100 Nicotiana tabacum HOM05D003677 ORTHO05D004231 8.2e-07 57.8 36 77.8
A03p33640 Brassica napus HOM05D003677 ORTHO05D004231 1.1e-06 57.4 47 63.8
BraA03t12539Z Brassica rapa HOM05D003677 ORTHO05D004231 1.1e-06 57.4 47 63.8
BcaC01g03318 Brassica carinata HOM05D003677 ORTHO05D004231 1.4e-06 57.0 37 62.2


User provided reference genes

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