Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 0.0e+00 1095.9 537 100.0
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 3.0e-256 888.3 538 81.6
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.1e-255 886.3 539 81.1
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 8.5e-251 870.2 543 79.6
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 5.0e-227 791.2 486 77.6
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.9e-226 789.3 463 80.6
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 4.2e-226 788.1 480 78.5
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 1.2e-225 786.6 513 73.5
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 8.0e-225 783.9 538 71.6
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 1.0e-224 783.5 461 79.8
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 2.3e-224 782.3 460 79.6
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 3.0e-224 781.9 473 78.6
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 8.9e-224 780.4 537 71.5
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.5e-223 779.6 469 78.9
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 2.0e-223 779.2 550 71.3
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 5.7e-223 777.7 473 77.4
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 7.5e-223 777.3 467 78.2
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 9.8e-223 776.9 520 73.1
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 1.3e-222 776.5 479 77.7
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 1.3e-222 776.5 485 76.5
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.7e-222 776.2 483 76.6
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 2.9e-222 775.4 499 74.5
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 3.7e-222 775.0 468 78.0
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 3.7e-222 775.0 537 70.0
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 4.9e-222 774.6 535 70.5
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 8.3e-222 773.9 547 69.1
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.1e-221 773.5 544 70.8
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.1e-221 773.5 539 70.5
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.1e-221 773.5 473 77.8
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 1.1e-221 773.5 547 68.9
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.4e-221 773.1 539 70.3
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 5.4e-221 771.2 462 79.0
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 1.2e-220 770.0 539 70.3
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.6e-220 769.6 465 78.1
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.6e-220 769.6 539 70.3
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 2.0e-220 769.2 508 72.8
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 5.9e-220 767.7 544 69.9
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 2.9e-219 765.4 479 76.0
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 3.9e-219 765.0 538 70.4
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 5.0e-219 764.6 485 75.5
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.6e-219 763.8 461 78.1
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 8.6e-219 763.8 471 77.7
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 3.3e-218 761.9 464 77.4
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 7.3e-218 760.8 506 72.7
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 1.2e-217 760.0 475 76.2
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 1.6e-217 759.6 458 79.3
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 2.1e-217 759.2 512 71.5
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 2.8e-217 758.8 501 72.9
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 4.7e-217 758.1 503 73.4
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 6.1e-217 757.7 471 75.6
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 6.1e-217 757.7 562 67.1
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 6.1e-217 757.7 473 76.7
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 1.4e-216 756.5 470 75.1
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 3.1e-216 755.4 505 71.3
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 5.2e-216 754.6 546 68.1
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 8.9e-216 753.8 463 76.9
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 1.2e-215 753.4 524 70.0
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 2.6e-215 752.3 465 76.6
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 3.4e-215 751.9 469 75.5
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 1.7e-214 749.6 461 76.8
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 2.9e-214 748.8 469 75.3
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 4.9e-214 748.0 459 76.0
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 8.3e-214 747.3 463 75.8
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 1.9e-213 746.1 479 73.3
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 3.2e-213 745.3 463 76.7
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 7.0e-213 744.2 542 67.3
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 7.0e-213 744.2 553 66.2
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 9.2e-213 743.8 501 70.9
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 1.6e-212 743.0 463 75.2
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 2.0e-212 742.7 539 67.7
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 2.0e-212 742.7 461 75.5
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 3.5e-212 741.9 463 76.2
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 1.0e-211 740.3 493 72.2
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 1.1e-210 736.9 529 68.4
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 1.5e-210 736.5 468 74.4
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 4.3e-210 734.9 559 65.8
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 4.3e-210 734.9 481 73.0
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 5.6e-210 734.6 466 75.1
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 9.5e-210 733.8 469 73.8
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 9.5e-210 733.8 471 73.0
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.2e-209 733.4 443 78.3
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 3.6e-209 731.9 463 74.7
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 4.7e-209 731.5 463 75.2
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 4.7e-209 731.5 517 69.8
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.4e-208 729.9 463 74.7
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 2.3e-208 729.2 469 73.8
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 2.3e-208 729.2 463 74.7
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 1.5e-207 726.5 436 78.4
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 4.4e-207 724.9 485 72.4
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 7.5e-207 724.2 538 65.8
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 1.7e-206 723.0 460 74.1
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 2.9e-206 722.2 473 74.2
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 9.2e-205 717.2 462 74.0
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 1.2e-204 716.8 492 71.7
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 4.6e-204 714.9 528 68.6
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 8.1e-201 704.1 458 74.2
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 8.1e-201 704.1 652 57.5
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 8.1e-201 704.1 460 71.5
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 1.5e-199 699.9 460 71.3
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 1.1e-197 693.7 477 71.5
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 6.6e-195 684.5 421 75.5
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 4.0e-192 675.2 421 74.6
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 4.9e-190 668.3 467 71.7
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 7.8e-188 661.0 474 67.1
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 3.9e-187 658.7 469 66.1
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 4.8e-185 651.7 470 70.2
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 9.9e-183 644.0 444 70.3
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 4.9e-182 641.7 462 64.3
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 4.2e-181 638.6 465 64.7
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 1.3e-177 627.1 482 62.4
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 2.1e-177 626.3 451 65.0
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 2.4e-176 622.9 460 63.9
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 3.2e-173 612.5 460 62.8
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 9.3e-173 610.9 421 70.1
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 7.4e-170 601.3 464 65.1
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 1.4e-168 597.0 457 63.9
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 7.6e-167 591.3 474 61.4
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.4e-165 587.0 456 62.3
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.9e-165 586.6 348 79.0
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 1.9e-165 586.6 437 67.7
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 6.9e-160 568.2 498 57.2
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.3e-145 520.8 387 68.2
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 1.1e-136 491.1 350 68.6
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 1.3e-126 457.6 502 48.6
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 3.8e-118 429.5 421 51.3
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 2.0e-114 417.2 353 62.0
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.7e-110 404.1 373 57.6
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 2.9e-110 403.3 255 73.7
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.4e-98 362.8 261 65.1
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.6e-92 344.4 326 56.1
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 6.4e-89 332.4 244 70.5
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 1.0e-86 325.1 214 67.8
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 3.0e-86 323.6 258 58.9
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 1.9e-80 304.3 242 60.3
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 2.3e-62 244.2 175 73.1
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 1.3e-54 218.4 162 63.6
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 2.4e-51 207.6 144 69.4
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.0e-42 177.9 113 72.6
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 2.9e-41 174.1 100 84.0
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 2.1e-39 167.9 156 57.1
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 3.6e-39 167.2 178 53.4
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 4.1e-35 153.7 91 73.6
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.2e-34 152.1 115 66.1
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.6e-29 134.4 152 50.0
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 2.5e-16 91.3 113 46.9
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 1.8e-14 85.1 57 59.6
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 7.5e-13 79.7 46 87.0
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 7.5e-13 79.7 46 87.0
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 3.1e-11 74.3 44 84.1
ATR1171G001 Amborella trichopoda HOM05D004653 ORTHO05D019566 9.1e-11 72.8 107 49.5
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 9.1e-11 72.8 57 63.2
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 1.5e-08 65.5 61 62.3


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