Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 4.4e-264 914.1 455 100.0
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 3.0e-196 688.7 457 74.4
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 2.6e-192 675.6 457 74.0
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 2.5e-179 632.5 456 70.2
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 9.9e-176 620.5 462 70.3
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 2.2e-159 566.2 457 62.4
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 5.5e-158 561.6 455 62.2
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 7.2e-158 561.2 459 63.6
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 9.3e-158 560.8 458 63.1
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 4.6e-157 558.5 458 62.0
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.3e-156 557.0 458 61.8
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 3.0e-156 555.8 460 63.3
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 3.9e-156 555.4 459 62.3
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 6.7e-156 554.7 461 62.0
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 6.7e-156 554.7 470 61.5
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 6.7e-156 554.7 456 63.6
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 8.7e-156 554.3 465 60.0
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 8.7e-156 554.3 465 60.0
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 8.7e-156 554.3 468 62.6
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 1.9e-155 553.1 455 60.9
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 7.4e-155 551.2 457 61.9
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 1.3e-154 550.4 458 60.9
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 1.3e-154 550.4 464 62.1
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 1.7e-154 550.1 474 60.8
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 6.3e-154 548.1 456 61.8
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 2.6e-152 542.7 469 61.0
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 5.9e-152 541.6 480 59.2
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.3e-151 540.4 488 58.8
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 5.0e-151 538.5 455 60.9
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 6.5e-151 538.1 465 60.9
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 6.5e-151 538.1 454 60.4
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 8.5e-151 537.7 455 59.8
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 1.1e-150 537.3 457 60.2
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 1.4e-150 537.0 484 58.9
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 1.9e-150 536.6 458 59.0
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 3.2e-150 535.8 457 60.8
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 4.2e-150 535.4 457 59.3
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 4.2e-150 535.4 455 60.0
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 4.2e-150 535.4 455 60.0
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 5.5e-150 535.0 470 59.6
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 7.2e-150 534.6 459 59.5
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 7.2e-150 534.6 455 60.2
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 7.2e-150 534.6 455 59.6
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 7.2e-150 534.6 453 59.6
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 2.7e-149 532.7 484 58.7
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 3.6e-149 532.3 467 58.7
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 4.7e-149 531.9 465 59.6
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 3.9e-148 528.9 482 57.9
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 6.7e-148 528.1 455 59.3
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 1.1e-147 527.3 457 59.1
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 1.1e-147 527.3 461 59.0
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 3.3e-147 525.8 459 57.7
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 4.4e-147 525.4 484 58.1
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.7e-146 523.5 462 57.6
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 2.8e-146 522.7 523 54.3
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 4.8e-146 521.9 468 59.0
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 8.2e-146 521.2 481 58.2
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 1.4e-145 520.4 461 57.0
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 3.1e-145 519.2 474 58.0
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 5.3e-145 518.5 462 58.4
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 4.5e-144 515.4 456 57.7
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 7.7e-144 514.6 458 58.5
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 8.5e-143 511.1 458 57.0
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 1.1e-142 510.8 462 58.7
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 1.4e-142 510.4 486 54.7
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 2.5e-142 509.6 477 56.6
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 2.5e-142 509.6 461 58.8
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 5.5e-142 508.4 467 57.2
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 7.2e-142 508.1 456 58.8
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 6.1e-141 505.0 459 56.6
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 3.9e-140 502.3 461 57.0
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 7.4e-139 498.0 458 59.4
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 4.8e-138 495.4 460 56.5
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 1.4e-137 493.8 486 54.3
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.4e-137 493.8 459 56.9
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 2.2e-135 486.5 496 52.8
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 6.5e-135 485.0 462 56.9
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 8.5e-135 484.6 493 53.5
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.4e-132 477.2 484 55.2
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 6.7e-132 474.9 473 54.3
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 8.8e-132 474.6 418 60.3
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 2.0e-131 473.4 486 53.7
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 4.4e-131 472.2 491 50.7
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 5.7e-131 471.9 484 54.8
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 9.1e-129 464.5 425 57.9
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 4.5e-128 462.2 468 53.6
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 1.2e-125 454.1 411 58.2
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 8.6e-119 431.4 445 51.7
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 1.9e-118 430.3 340 64.1
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 1.2e-117 427.6 448 52.0
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 1.3e-114 417.5 378 58.5
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 1.7e-114 417.2 452 49.6
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 1.1e-113 414.5 379 59.4
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 7.0e-113 411.8 358 60.1
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 8.6e-111 404.8 358 59.5
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 8.0e-109 398.3 357 58.5
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 3.6e-101 372.9 369 52.0
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 1.3e-98 364.4 515 39.4
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 8.3e-98 361.7 460 42.6
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 1.0e-95 354.8 346 57.8
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 3.6e-93 346.3 458 41.3
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 2.2e-90 337.0 294 61.9
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 8.3e-90 335.1 489 39.1
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 4.6e-88 329.3 449 43.9
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.5e-83 314.3 462 37.4
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 8.7e-71 271.9 430 40.7
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 1.0e-55 221.9 249 49.4
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 1.3e-42 178.3 279 39.4
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 1.0e-39 168.7 485 27.6
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.7e-39 166.0 159 58.5
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 8.8e-39 165.6 159 57.9
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 2.0e-35 154.5 239 41.8
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 2.6e-35 154.1 248 36.7
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 5.0e-34 149.8 490 28.0
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 4.8e-21 106.7 106 48.1
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 2.6e-19 100.9 227 34.4
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 4.0e-15 87.0 107 49.5
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.6e-14 84.3 102 50.0
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 7.5e-14 82.8 59 62.7
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 1.3e-13 82.0 44 90.9
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 2.0e-11 74.7 260 25.4
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.6e-08 65.1 48 66.7
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.4e-07 62.0 68 54.4
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 1.4e-07 62.0 71 50.7


User provided reference genes

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