Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.20451 Avicennia marina HOM05D000840 ORTHO05D000670 3.1e-51 204.9 109 100.0
MSTRG.20450 Avicennia marina HOM05D000840 ORTHO05D000670 1.2e-34 149.8 97 78.4
Migut.B01095 Erythranthe guttata HOM05D000840 ORTHO05D000670 3.5e-26 121.7 99 70.7
SGA_v2.0_scaffold172G38982 Striga asiatica HOM05D000840 ORTHO05D000670 4.9e-20 101.3 102 59.8
SalBow8G4283 Salvia bowleyana HOM05D000840 ORTHO05D000670 3.1e-19 98.6 95 62.1
Nitab4.5_0004105g0020 Nicotiana tabacum HOM05D000840 ORTHO05D000670 2.3e-17 92.4 99 54.5
Ciclev10024717m.g Citrus clementina HOM05D000840 ORTHO05D000670 5.6e-16 87.8 98 54.1
Sopen04g004660 Solanum pennellii HOM05D000840 ORTHO05D000670 5.6e-16 87.8 99 52.5
Nn2g14599 Nelumbo nucifera HOM05D000840 ORTHO05D000670 1.2e-15 86.7 98 56.1
Prupe.6G027500 Prunus persica HOM05D000840 ORTHO05D000670 3.6e-15 85.1 99 51.5
Dinv31533 Davidia involucrata HOM05D000840 ORTHO05D000670 6.1e-15 84.3 98 53.1
FAN25G1451 Fragaria x ananassa HOM05D000840 ORTHO05D000670 1.0e-14 83.6 93 54.8
FvH4_3g42370 Fragaria vesca HOM05D000840 ORTHO05D000670 1.8e-14 82.8 93 54.8
FAN11G2882 Fragaria x ananassa HOM05D000840 ORTHO05D000670 1.8e-14 82.8 93 54.8
FAN16G1995 Fragaria x ananassa HOM05D000840 ORTHO05D000670 1.8e-14 82.8 93 54.8
Peaxi162Scf00195g00830 Petunia axillaris HOM05D000840 ORTHO05D000670 3.0e-14 82.0 99 49.5
QL05p033046 Quercus lobata HOM05D000840 ORTHO05D000670 5.2e-14 81.3 98 52.0
Aqoxy1G00094 Aquilegia oxysepala HOM05D000840 ORTHO05D000670 2.6e-13 79.0 98 55.1
Haze_16613 Corylus avellana HOM05D000840 ORTHO05D000670 2.6e-13 79.0 101 52.5
PSO384G2259 Papaver somniferum HOM05D000840 ORTHO05D000670 2.6e-13 79.0 96 53.1
Prupe.6G111000 Prunus persica HOM05D000840 ORTHO05D000670 2.6e-13 79.0 99 48.5
Actinidia01692 Actinidia chinensis HOM05D000840 ORTHO05D000670 3.4e-13 78.6 101 54.5
CAN.G186.26 Capsicum annuum HOM05D000840 ORTHO05D000670 4.4e-13 78.2 99 50.5
MD11G1036600 Malus domestica HOM05D000840 ORTHO05D000670 1.3e-12 76.6 100 49.0
Cc00_g09670 Coffea canephora HOM05D000840 ORTHO05D000670 1.7e-12 76.3 100 47.0
Manes.11G061900 Manihot esculenta HOM05D000840 ORTHO05D000670 1.7e-12 76.3 100 50.0
PSO339G3445 Papaver somniferum HOM05D000840 ORTHO05D000670 2.2e-12 75.9 96 52.1
Oeu013039.1 Olea europaea HOM05D000840 ORTHO05D000670 4.9e-12 74.7 65 64.6
PGR044G1495 Punica granatum HOM05D000840 ORTHO05D000670 4.9e-12 74.7 100 48.0
Cfa001928 Carpinus fangiana HOM05D000840 ORTHO05D000670 6.4e-12 74.3 99 49.5
Oeu012484.1 Olea europaea HOM05D000840 ORTHO05D000670 8.3e-12 73.9 65 63.1
Duzib235G0104 Durio zibethinus HOM05D000840 ORTHO05D000670 1.1e-11 73.6 98 42.9
CiPaw.01G251200 Carya illinoinensis HOM05D000840 ORTHO05D000670 1.4e-11 73.2 98 48.0
FAN21G2894 Fragaria x ananassa HOM05D000840 ORTHO05D000670 1.4e-11 73.2 92 50.0
Thecc.06G034100 Theobroma cacao HOM05D000840 ORTHO05D000670 1.9e-11 72.8 98 43.9
QL05p033176 Quercus lobata HOM05D000840 ORTHO05D000670 2.4e-11 72.4 98 49.0
Sc14g0004830 Simmondsia chinensis HOM05D000840 ORTHO05D000670 2.4e-11 72.4 100 45.0
Ah.10g029760 Amaranthus hybridus HOM05D000840 ORTHO05D000670 4.1e-11 71.6 102 49.0
unitig_46.g18363 Utricularia gibba HOM05D005736 ORTHO05D007215 4.1e-11 71.6 98 46.9
unitig_48.g30291 Utricularia gibba HOM05D003281 ORTHO05D004128 4.1e-11 71.6 98 46.9
Gorai.009G126200 Gossypium raimondii HOM05D000840 ORTHO05D000670 5.4e-11 71.2 98 42.9
Rhsim01G0123000 Rhododendron simsii HOM05D000840 ORTHO05D000670 7.0e-11 70.9 98 49.0
Hund15769 Selenicereus undatus HOM05D000840 ORTHO05D000670 7.0e-11 70.9 102 45.1
PSO210G6664 Papaver somniferum HOM05D000840 ORTHO05D000670 9.2e-11 70.5 98 49.0
TWI75G0929 Tripterygium wilfordii HOM05D000840 ORTHO05D000670 9.2e-11 70.5 98 49.0
PSO210G0831 Papaver somniferum HOM05D000840 ORTHO05D000670 1.2e-10 70.1 98 44.9
Thecc.06G034400 Theobroma cacao HOM05D000840 ORTHO05D000670 1.2e-10 70.1 98 41.8
Gohir.D05G122700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 1.6e-10 69.7 98 41.8
HanXRQChr03g0080491 Helianthus annuus HOM05D000840 ORTHO05D000670 1.6e-10 69.7 100 45.0
RcHm_v2.0_Chr5g0075871 Rosa chinensis HOM05D000840 ORTHO05D000670 1.6e-10 69.7 98 45.9
TWI12G0605 Tripterygium wilfordii HOM05D000840 ORTHO05D000670 1.6e-10 69.7 98 46.9
DCAR_003830 Daucus carota HOM05D000840 ORTHO05D000670 2.7e-10 68.9 98 43.9
Potri.001G204900 Populus trichocarpa HOM05D000840 ORTHO05D000670 3.5e-10 68.6 99 47.5
Solyc04g009500.4 Solanum lycopersicum HOM05D000840 ORTHO05D000670 4.6e-10 68.2 65 53.8
Cc00_g11640 Coffea canephora HOM05D000840 ORTHO05D000670 6.0e-10 67.8 100 44.0
PSO384G1694 Papaver somniferum HOM05D000840 ORTHO05D000670 6.0e-10 67.8 85 51.8
SalBow8G1535 Salvia bowleyana HOM05D000840 ORTHO05D000670 6.0e-10 67.8 99 50.5
Dinv31992 Davidia involucrata HOM05D000840 ORTHO05D000670 1.0e-09 67.0 108 45.4
Duzib235G0269 Durio zibethinus HOM05D000840 ORTHO05D000670 1.0e-09 67.0 98 39.8
Eucgr.J00090 Eucalyptus grandis HOM05D000840 ORTHO05D000670 1.0e-09 67.0 97 46.4
Gohir.A05G121700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 1.0e-09 67.0 98 41.8
Rhsim01G0143500 Rhododendron simsii HOM05D000840 ORTHO05D000670 1.0e-09 67.0 99 47.5
Cpa.g.sc14.207 Carica papaya HOM05D000840 ORTHO05D000670 1.3e-09 66.6 100 50.0
Ca_01040_v3 Cicer arietinum L. HOM05D000840 ORTHO05D000670 2.3e-09 65.9 99 44.4
Duzib160G0548 Durio zibethinus HOM05D000840 ORTHO05D000670 2.3e-09 65.9 100 40.0
Gorai.011G085600 Gossypium raimondii HOM05D000840 ORTHO05D000670 3.9e-09 65.1 100 44.0
PGSC0003DMG400010627 Solanum tuberosum HOM05D000840 ORTHO05D000670 3.9e-09 65.1 85 48.2
Duzib235G1450 Durio zibethinus HOM05D000840 ORTHO05D000670 6.6e-09 64.3 98 39.8
vmacro21082 Vaccinium macrocarpon HOM05D000840 ORTHO05D000670 6.6e-09 64.3 99 45.5
CiPaw.02G159300 Carya illinoinensis HOM05D000840 ORTHO05D000670 1.1e-08 63.5 97 42.3
ClCG09G013490 Citrullus lanatus HOM05D000840 ORTHO05D000670 1.1e-08 63.5 99 46.5
Duzib235G0353 Durio zibethinus HOM05D000840 ORTHO05D000670 1.5e-08 63.2 98 37.8
Lsat_1_v5_gn_6_15960 Lactuca sativa HOM05D000840 ORTHO05D000670 1.5e-08 63.2 101 43.6
MBI04_g25415_MAGBIO Magnolia biondii HOM05D000840 ORTHO05D000670 1.5e-08 63.2 99 45.5
PSO210G7462 Papaver somniferum HOM05D000840 ORTHO05D000670 1.5e-08 63.2 88 48.9
Lsat_1_v5_gn_5_51740 Lactuca sativa HOM05D000840 ORTHO05D000670 1.9e-08 62.8 100 40.0
PSO210G3299 Papaver somniferum HOM05D000840 ORTHO05D000670 1.9e-08 62.8 98 43.9
COL.COLO4_11847 Corchorus olitorius HOM05D000840 ORTHO05D000670 2.5e-08 62.4 100 40.0
Gohir.A10G072300 Gossypium hirsutum HOM05D000840 ORTHO05D000670 3.3e-08 62.0 98 42.9
Gohir.D10G078800 Gossypium hirsutum HOM05D000840 ORTHO05D000670 3.3e-08 62.0 100 43.0
CiPaw.02G159400 Carya illinoinensis HOM05D000840 ORTHO05D000670 9.5e-08 60.5 97 41.2
MD03G1032600 Malus domestica HOM05D000840 ORTHO05D000670 9.5e-08 60.5 97 38.1
PSO210G4621 Papaver somniferum HOM05D000840 ORTHO05D000670 9.5e-08 60.5 98 42.9
vmacro12684 Vaccinium macrocarpon HOM05D000840 ORTHO05D000670 9.5e-08 60.5 118 41.5
Glyma.08G214900 Glycine max HOM05D000840 ORTHO05D000670 1.6e-07 59.7 99 41.4
Medtr2g104400 Medicago truncatula HOM05D000840 ORTHO05D000670 1.6e-07 59.7 81 48.1
Gohir.D10G078700 Gossypium hirsutum HOM05D000840 ORTHO05D000670 3.6e-07 58.5 98 40.8
QL05p031633 Quercus lobata HOM05D000840 ORTHO05D000670 6.2e-07 57.8 97 40.2
QL05p031849 Quercus lobata HOM05D000840 ORTHO05D000670 6.2e-07 57.8 97 40.2
Lalb_Chr24g0395381 Lupinus albus HOM05D000840 ORTHO05D000670 8.0e-07 57.4 99 40.4
QL05p031619 Quercus lobata HOM05D000840 ORTHO05D000670 8.0e-07 57.4 66 54.5
Oeu027053.1 Olea europaea HOM05D000840 ORTHO05D000670 1.4e-06 56.6 99 43.4
PSO210G6990 Papaver somniferum HOM05D000840 ORTHO05D000670 1.4e-06 56.6 99 47.5
Glyma.07G027800 Glycine max HOM05D000840 ORTHO05D000670 1.8e-06 56.2 99 40.4
PGSC0003DMG400008764 Solanum tuberosum HOM05D000840 ORTHO05D000670 1.8e-06 56.2 73 49.3
TPR.G37212 Trifolium pratense HOM05D000840 ORTHO05D000670 2.3e-06 55.8 100 42.0
Phvul.010G157900 Phaseolus vulgaris HOM05D000840 ORTHO05D000670 3.1e-06 55.5 99 39.4
DCAR_007818 Daucus carota HOM05D000840 ORTHO05D000670 4.0e-06 55.1 97 38.1
Gorai.011G085500 Gossypium raimondii HOM05D000840 ORTHO05D000670 4.0e-06 55.1 98 41.8
SHI11281 Sapria himalayana HOM05D000840 ORTHO05D000670 4.0e-06 55.1 99 42.4
Cpa.g.sc10.131 Carica papaya HOM05D000840 ORTHO05D000670 5.2e-06 54.7 95 43.2
Lalb_Chr01g0012231 Lupinus albus HOM05D000840 ORTHO05D000670 5.2e-06 54.7 83 43.4
CANSAT56G1456 Cannabis sativa HOM05D000840 ORTHO05D000670 6.8e-06 54.3 99 43.4
Glyma.07G027751 Glycine max HOM05D000840 ORTHO05D000670 6.8e-06 54.3 99 39.4
Nitab4.5_0010235g0010 Nicotiana tabacum HOM05D000840 ORTHO05D000670 6.8e-06 54.3 99 38.4
THA.LOC104808194 Tarenaya hassleriana HOM05D000840 ORTHO05D000670 6.8e-06 54.3 93 43.0
Ca_20456_v3 Cicer arietinum L. HOM05D000840 ORTHO05D000670 8.9e-06 53.9 97 41.2
RcHm_v2.0_Chr5g0075851 Rosa chinensis HOM05D000840 ORTHO05D000670 8.9e-06 53.9 102 38.2


User provided reference genes

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