Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.19814 Avicennia marina HOM05D003729 ORTHO05D004384 0.0e+00 1307.0 675 100.0
unitig_27.g24938 Utricularia gibba HOM05D003729 ORTHO05D004384 1.1e-284 983.0 640 76.9
Migut.N03364 Erythranthe guttata HOM05D003729 ORTHO05D004384 4.4e-281 971.1 647 77.6
Dinv26813 Davidia involucrata HOM05D003729 ORTHO05D004384 1.1e-276 956.4 664 75.6
SGA_v2.0_scaffold149G36565 Striga asiatica HOM05D003729 ORTHO05D004384 4.3e-276 954.5 668 74.6
Dinv34365 Davidia involucrata HOM05D003729 ORTHO05D004384 3.4e-273 944.9 665 74.7
Cc06_g19080 Coffea canephora HOM05D003729 ORTHO05D004384 3.8e-272 941.4 645 75.5
Hma1.2p1_0402F.1_g145090 Hydrangea macrophylla HOM05D003729 ORTHO05D004384 3.5e-270 934.9 656 74.4
CSS0000349 Camellia sinensis var. sinensis HOM05D003729 ORTHO05D004384 6.0e-270 934.1 652 75.6
GSVIVG01033615001 Vitis vinifera HOM05D003729 ORTHO05D004384 2.5e-268 928.7 654 74.0
Actinidia38159 Actinidia chinensis HOM05D003729 ORTHO05D004384 2.1e-267 925.6 638 75.1
DCAR_013638 Daucus carota HOM05D003729 ORTHO05D004384 5.5e-263 911.0 650 72.2
Nitab4.5_0005447g0050 Nicotiana tabacum HOM05D003729 ORTHO05D004384 6.0e-262 907.5 651 72.5
Rhsim04G0111000 Rhododendron simsii HOM05D003729 ORTHO05D004384 7.9e-262 907.1 671 72.4
CiPaw.09G047000 Carya illinoinensis HOM05D003729 ORTHO05D004384 1.0e-261 906.7 642 72.4
Sopen10g034990 Solanum pennellii HOM05D003729 ORTHO05D004384 5.1e-261 904.4 635 73.4
Manes.15G116200 Manihot esculenta HOM05D003729 ORTHO05D004384 2.8e-259 898.7 640 73.3
TAR629G1039 Trochodendron aralioides HOM05D003729 ORTHO05D004384 4.1e-258 894.8 655 71.8
Nn7g37723 Nelumbo nucifera HOM05D003729 ORTHO05D004384 6.9e-258 894.0 659 71.0
QL06p031735 Quercus lobata HOM05D003729 ORTHO05D004384 9.0e-258 893.6 643 71.4
Eucgr.B01227 Eucalyptus grandis HOM05D003729 ORTHO05D004384 2.0e-257 892.5 656 70.9
CAN.G1099.5 Capsicum annuum HOM05D003729 ORTHO05D004384 2.5e-255 885.6 640 72.2
COL.COLO4_31341 Corchorus olitorius HOM05D003729 ORTHO05D004384 6.7e-253 877.5 630 72.1
Peaxi162Scf00146g00613 Petunia axillaris HOM05D003729 ORTHO05D004384 1.1e-252 876.7 647 70.0
arahy.Tifrunner.gnm1.ann1.UC9EW5 Arachis hypogaea HOM05D003729 ORTHO05D004384 7.4e-252 874.0 639 70.1
vmacro09025 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 7.4e-252 874.0 698 68.9
Glyma.09G171000 Glycine max HOM05D003729 ORTHO05D004384 1.6e-251 872.8 660 68.0
Glyma.07G106900 Glycine max HOM05D003729 ORTHO05D004384 8.2e-251 870.5 661 67.9
VMungo0464G0714 Vigna mungo HOM05D003729 ORTHO05D004384 1.4e-250 869.8 642 69.6
HanXRQChr12g0359771 Helianthus annuus HOM05D003729 ORTHO05D004384 1.8e-250 869.4 647 70.2
PGR031G2313 Punica granatum HOM05D003729 ORTHO05D004384 2.4e-250 869.0 651 70.2
Atru.chr11.1446 Acer truncatum HOM05D003729 ORTHO05D004384 4.1e-250 868.2 665 70.4
Atru.chr11.1476 Acer truncatum HOM05D003729 ORTHO05D004384 4.1e-250 868.2 665 70.4
HanXRQChr10g0311271 Helianthus annuus HOM05D003729 ORTHO05D004384 2.6e-249 865.5 639 70.6
Prupe.5G014500 Prunus persica HOM05D003729 ORTHO05D004384 2.6e-249 865.5 661 70.3
Phvul.004G146700 Phaseolus vulgaris HOM05D003729 ORTHO05D004384 3.4e-249 865.1 642 69.2
Duzib106G1244 Durio zibethinus HOM05D003729 ORTHO05D004384 4.5e-249 864.8 664 70.6
Aqoxy3G00221 Aquilegia oxysepala HOM05D003729 ORTHO05D004384 1.7e-248 862.8 640 70.5
Lsat_1_v5_gn_5_75341 Lactuca sativa HOM05D003729 ORTHO05D004384 5.0e-248 861.3 648 69.1
Gohir.D11G323300 Gossypium hirsutum HOM05D003729 ORTHO05D004384 3.6e-246 855.1 643 69.5
Gorai.007G353300 Gossypium raimondii HOM05D003729 ORTHO05D004384 3.6e-246 855.1 643 69.5
Gohir.A11G307900 Gossypium hirsutum HOM05D003729 ORTHO05D004384 4.6e-246 854.7 641 69.4
Prupe.8G004300 Prunus persica HOM05D003729 ORTHO05D004384 7.9e-246 854.0 688 67.7
ClCG09G015010 Citrullus lanatus HOM05D003729 ORTHO05D004384 1.3e-243 846.7 629 69.2
Lj6g0002169 Lotus japonicus HOM05D003729 ORTHO05D004384 1.3e-243 846.7 627 69.7
Ca_11233_v3 Cicer arietinum L. HOM05D003729 ORTHO05D004384 4.8e-243 844.7 653 69.1
EL10Ac3g07219 Beta vulgaris HOM05D003729 ORTHO05D004384 8.2e-243 844.0 666 67.0
Lalb_Chr06g0173631 Lupinus albus HOM05D003729 ORTHO05D004384 1.1e-242 843.6 642 67.9
Cfa020012 Carpinus fangiana HOM05D003729 ORTHO05D004384 2.4e-242 842.4 644 69.3
THA.LOC104802558 Tarenaya hassleriana HOM05D003729 ORTHO05D004384 4.1e-242 841.6 654 67.6
Medtr2g081080 Medicago truncatula HOM05D003729 ORTHO05D004384 7.7e-241 837.4 628 68.9
Ah.04g151040 Amaranthus hybridus HOM05D003729 ORTHO05D004384 2.2e-240 835.9 650 67.8
ECA234G1736 Erigeron canadensis HOM05D003729 ORTHO05D004384 3.8e-240 835.1 642 68.7
Potri.016G037400 Populus trichocarpa HOM05D003729 ORTHO05D004384 1.9e-239 832.8 656 65.2
Psat5g246840 Pisum sativum HOM05D003729 ORTHO05D004384 3.2e-239 832.0 638 66.9
FvH4_2g11640 Fragaria vesca HOM05D003729 ORTHO05D004384 7.2e-239 830.9 643 68.0
ATR0757G154 Amborella trichopoda HOM05D003729 ORTHO05D004384 7.9e-238 827.4 673 64.3
RcHm_v2.0_Chr6g0270881 Rosa chinensis HOM05D003729 ORTHO05D004384 3.9e-237 825.1 642 67.9
AUR62023904 Chenopodium quinoa HOM05D003729 ORTHO05D004384 8.8e-237 823.9 625 68.0
CsaV3_7G006250 Cucumis sativus L. HOM05D003729 ORTHO05D004384 3.3e-236 822.0 628 66.4
Sed0006249 Sechium edule HOM05D003729 ORTHO05D004384 3.1e-234 815.5 653 65.4
Thecc.05G137800 Theobroma cacao HOM05D003729 ORTHO05D004384 5.3e-234 814.7 613 70.5
PSO782G2431 Papaver somniferum HOM05D003729 ORTHO05D004384 3.5e-233 812.0 642 66.0
Sabra16G0044200 Salix brachista HOM05D003729 ORTHO05D004384 1.3e-232 810.1 689 62.7
Lj1g0021267 Lotus japonicus HOM05D003729 ORTHO05D004384 5.0e-232 808.1 627 67.8
MBI04_g42401_MAGBIO Magnolia biondii HOM05D003729 ORTHO05D004384 6.5e-232 807.7 660 66.4
PSO478G2512 Papaver somniferum HOM05D003729 ORTHO05D004384 6.5e-232 807.7 641 65.8
Sabra16G0039300 Salix brachista HOM05D003729 ORTHO05D004384 2.5e-231 805.8 689 62.7
HPP92_002023 Vanilla planifolia HOM05D003729 ORTHO05D004384 1.0e-229 800.4 643 65.3
Carub.0005s2373 Capsella rubella HOM05D003729 ORTHO05D004384 4.0e-229 798.5 648 65.4
CANSAT64G1452 Cannabis sativa HOM05D003729 ORTHO05D004384 6.7e-229 797.7 638 65.8
AUR62003735 Chenopodium quinoa HOM05D003729 ORTHO05D004384 5.7e-228 794.7 684 61.5
Aa31LG10G11890 Aethionema arabicum HOM05D003729 ORTHO05D004384 2.8e-227 792.3 646 64.1
Thhalv10005807m.g Eutrema salsugineum HOM05D003729 ORTHO05D004384 8.2e-227 790.8 670 61.5
Sp5g05590 Schrenkiella parvula HOM05D003729 ORTHO05D004384 4.2e-223 778.5 646 63.0
AL5G38440 Arabidopsis lyrata HOM05D003729 ORTHO05D004384 1.6e-222 776.5 648 62.3
BcaC07g40019 Brassica carinata HOM05D003729 ORTHO05D004384 8.0e-222 774.2 653 62.2
CARHR167140 Cardamine hirsuta HOM05D003729 ORTHO05D004384 1.0e-221 773.9 648 62.5
Nitab4.5_0000381g0340 Nicotiana tabacum HOM05D003729 ORTHO05D004384 1.0e-221 773.9 978 48.3
C08p32320 Brassica napus HOM05D003729 ORTHO05D004384 2.3e-221 772.7 652 62.3
BolC8t50846H Brassica oleracea HOM05D003729 ORTHO05D004384 2.3e-221 772.7 652 62.1
A09p49920 Brassica napus HOM05D003729 ORTHO05D004384 1.7e-219 766.5 657 61.6
BraA09t40443Z Brassica rapa HOM05D003729 ORTHO05D004384 1.7e-219 766.5 657 61.6
Ciclev10027979m.g Citrus clementina HOM05D003729 ORTHO05D004384 1.7e-216 756.5 541 70.1
BcaC08g44817 Brassica carinata HOM05D003729 ORTHO05D004384 1.4e-210 736.9 654 61.2
BolC6t37563H Brassica oleracea HOM05D003729 ORTHO05D004384 9.2e-210 734.2 654 61.0
A07p23200 Brassica napus HOM05D003729 ORTHO05D004384 1.6e-209 733.4 650 60.6
BraA07t29984Z Brassica rapa HOM05D003729 ORTHO05D004384 1.6e-209 733.4 650 60.6
Sc13g0001200 Simmondsia chinensis HOM05D003729 ORTHO05D004384 6.1e-206 721.5 481 75.1
Zm00001eb373800 Zea mays HOM05D003729 ORTHO05D004384 6.1e-206 721.5 638 60.2
C06p24040 Brassica napus HOM05D003729 ORTHO05D004384 1.1e-202 710.7 689 58.9
arahy.Tifrunner.gnm1.ann1.HP2N24 Arachis hypogaea HOM05D003729 ORTHO05D004384 2.8e-198 696.0 544 66.5
SMO334G0073 Selaginella moellendorffii HOM05D003729 ORTHO05D004384 8.9e-197 691.0 640 55.8
Mapoly0009s0077 Marchantia polymorpha HOM05D003729 ORTHO05D004384 2.0e-196 689.9 677 53.0
TPR.G32867 Trifolium pratense HOM05D003729 ORTHO05D004384 1.7e-195 686.8 812 50.6
BcaC07g40088 Brassica carinata HOM05D003729 ORTHO05D004384 6.4e-195 684.9 658 56.5
FAN24G0230 Fragaria x ananassa HOM05D003729 ORTHO05D004384 3.5e-193 679.1 643 58.6
Pp3c18_60 Physcomitrium patens HOM05D003729 ORTHO05D004384 1.1e-191 674.1 692 53.2
AagrBONN_evm.TU.Sc2ySwM_228.5647 Anthoceros agrestis HOM05D003729 ORTHO05D004384 4.0e-189 665.6 650 54.2
MD06G1011700 Malus domestica HOM05D003729 ORTHO05D004384 4.0e-189 665.6 422 76.8
AT3G56990 Arabidopsis thaliana HOM05D003729 ORTHO05D004384 7.5e-188 661.4 471 69.9
Lj1A1094G13 Lonicera japonica HOM05D003729 ORTHO05D004384 1.9e-175 620.2 401 75.6
MELO3C018665.2 Cucumis melo HOM05D003729 ORTHO05D004384 3.6e-166 589.3 629 52.5
FAN15G2573 Fragaria x ananassa HOM05D003729 ORTHO05D004384 2.4e-165 586.6 642 53.1
Os06g0128400 Oryza sativa ssp. japonica HOM05D003729 ORTHO05D004384 4.6e-161 572.4 392 68.4
CBR_g12410 Chara braunii HOM05D003729 ORTHO05D004384 1.4e-154 550.8 680 45.7
Zm00001eb378550 Zea mays HOM05D003729 ORTHO05D004384 1.9e-154 550.4 528 57.2
AUR62016564 Chenopodium quinoa HOM05D003729 ORTHO05D004384 2.1e-150 537.0 581 52.7
MCO06G073 Micromonas commoda HOM05D003729 ORTHO05D004384 1.8e-141 507.3 704 44.0
Cre03.g159950 Chlamydomonas reinhardtii HOM05D003729 ORTHO05D004384 3.8e-139 499.6 667 41.8
BcaB02g07627 Brassica carinata HOM05D003729 ORTHO05D004384 2.2e-134 483.8 514 54.1
SEGI_15849 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 1.8e-128 464.2 451 59.4
PRCOL_00000752 Prasinoderma coloniale HOM05D003729 ORTHO05D004384 1.7e-118 431.0 498 46.0
vmacro10990 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 1.4e-117 427.9 411 60.6
Thecc.05G137400 Theobroma cacao HOM05D003729 ORTHO05D004384 1.0e-107 395.2 398 54.0
SHI40172 Sapria himalayana HOM05D003729 ORTHO05D004384 3.7e-94 350.1 437 49.2
Oeu059338.2 Olea europaea HOM05D003729 ORTHO05D004384 1.1e-90 338.6 358 57.5
Rhsim06G0100100 Rhododendron simsii HOM05D003729 ORTHO05D004384 1.3e-86 325.1 218 73.4
Thecc.05G137700 Theobroma cacao HOM05D003729 ORTHO05D004384 4.1e-85 320.1 221 71.0
SHI42965 Sapria himalayana HOM05D003729 ORTHO05D004384 4.6e-84 316.6 377 50.4
SHI43747 Sapria himalayana HOM05D003729 ORTHO05D004384 1.0e-83 315.5 311 55.9
Cfa025239 Carpinus fangiana HOM05D003729 ORTHO05D004384 4.9e-78 296.6 567 35.4
Lj1A1094G14 Lonicera japonica HOM05D003729 ORTHO05D004384 1.9e-66 258.1 255 60.8
SHI45339 Sapria himalayana HOM05D003729 ORTHO05D004384 6.8e-64 249.6 240 55.0
Atru.chr1.117 Acer truncatum HOM05D003729 ORTHO05D004384 1.2e-63 248.8 613 33.0
vmacro10989 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 6.4e-62 243.0 262 52.3
Thecc.05G138100 Theobroma cacao HOM05D003729 ORTHO05D004384 7.8e-60 236.1 131 85.5
Haze_16229 Corylus avellana HOM05D003729 ORTHO05D004384 4.0e-56 223.8 274 54.0
Haze_20214 Corylus avellana HOM05D003729 ORTHO05D004384 1.4e-53 215.3 260 53.5
SHI46975 Sapria himalayana HOM05D003729 ORTHO05D004384 2.1e-52 211.5 186 57.0
Haze_20210 Corylus avellana HOM05D003729 ORTHO05D004384 7.8e-52 209.5 260 52.3
Cpa.g.sc5.183 Carica papaya HOM05D003729 ORTHO05D004384 5.1e-51 206.8 210 55.7
HanXRQChr09g0238921 Helianthus annuus HOM05D003729 ORTHO05D004384 1.2e-47 195.7 107 85.0
Thecc.05G137500 Theobroma cacao HOM05D003729 ORTHO05D004384 1.6e-41 175.3 242 54.1
Cpa.g.sc1212.1 Carica papaya HOM05D003729 ORTHO05D004384 6.2e-41 173.3 95 86.3
Haze_20209 Corylus avellana HOM05D003729 ORTHO05D004384 5.3e-40 170.2 102 80.4
SEGI_35907 Sequoiadendron giganteum HOM05D003729 ORTHO05D004384 1.2e-39 169.1 119 67.2
Haze_20213 Corylus avellana HOM05D003729 ORTHO05D004384 1.5e-39 168.7 102 79.4
Gohir.A07G111501 Gossypium hirsutum HOM05D003729 ORTHO05D004384 5.5e-37 160.2 89 84.3
Gohir.D02G195125 Gossypium hirsutum HOM05D003729 ORTHO05D004384 5.5e-37 160.2 89 84.3
Gohir.D06G065600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 5.5e-37 160.2 89 84.3
Gorai.004G004200 Gossypium raimondii HOM05D003729 ORTHO05D004384 5.5e-37 160.2 108 75.0
Gohir.D05G190600 Gossypium hirsutum HOM05D003729 ORTHO05D004384 7.9e-36 156.4 85 84.7
arahy.Tifrunner.gnm1.ann1.7FD8QN Arachis hypogaea HOM05D003729 ORTHO05D004384 1.3e-35 155.6 207 47.3
SHI44105 Sapria himalayana HOM05D003729 ORTHO05D004384 3.9e-35 154.1 107 66.4
Haze_16231 Corylus avellana HOM05D003729 ORTHO05D004384 4.3e-34 150.6 175 46.3
vmacro12362 Vaccinium macrocarpon HOM05D003729 ORTHO05D004384 3.1e-32 144.4 79 83.5
SHI49287 Sapria himalayana HOM05D003729 ORTHO05D004384 5.3e-32 143.7 102 67.6
Haze_16230 Corylus avellana HOM05D003729 ORTHO05D004384 2.0e-31 141.7 79 82.3
Glyma.03G135700 Glycine max HOM05D003729 ORTHO05D004384 1.0e-30 139.4 207 39.1
Zm00001eb034510 Zea mays HOM05D003729 ORTHO05D004384 2.7e-28 131.3 106 62.3
SHI46293 Sapria himalayana HOM05D003729 ORTHO05D004384 1.8e-27 128.6 70 75.7
SHI45328 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-24 119.4 64 76.6
AUR62022314 Chenopodium quinoa HOM05D000534 ORTHO05D000389 1.8e-24 118.6 72 70.8
Haze_16233 Corylus avellana HOM05D003729 ORTHO05D004384 1.5e-23 115.5 83 71.1
Hund24619 Selenicereus undatus HOM05D003729 ORTHO05D004384 1.0e-22 112.8 156 46.8
QL07p009838 Quercus lobata HOM05D003729 ORTHO05D004384 3.8e-22 110.9 73 75.3
SHI38377 Sapria himalayana HOM05D003729 ORTHO05D004384 6.1e-20 103.6 60 80.0
SHI50183 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-19 102.4 105 52.4
SHI53576 Sapria himalayana HOM05D003729 ORTHO05D004384 3.0e-19 101.3 60 80.0
Sabra16G0029600 Salix brachista HOM05D000075 ORTHO05D000073 8.8e-19 99.8 88 60.2
SHI46294 Sapria himalayana HOM05D003729 ORTHO05D004384 4.3e-18 97.4 61 75.4
Haze_16235 Corylus avellana HOM05D003729 ORTHO05D004384 7.4e-18 96.7 60 78.3
Cpa.g.sc5.181 Carica papaya HOM05D003729 ORTHO05D004384 1.3e-17 95.9 56 75.0
Zm00001eb077600 Zea mays HOM05D001162 ORTHO05D029047 2.2e-17 95.1 90 52.2
Zm00001eb284510 Zea mays HOM05D001162 ORTHO05D001218 6.3e-17 93.6 56 73.2
Zm00001eb173210 Zea mays HOM05D001162 ORTHO05D001218 1.4e-16 92.4 56 71.4
FvH4_3g33711 Fragaria vesca HOM05D003729 ORTHO05D001837 6.9e-16 90.1 98 48.0
SHI51948 Sapria himalayana HOM05D003729 ORTHO05D004384 1.2e-15 89.4 190 38.4
SHI49946 Sapria himalayana HOM05D003729 ORTHO05D004384 5.9e-15 87.0 133 42.1
Medtr8g007595 Medicago truncatula HOM05D003729 ORTHO05D004384 7.7e-15 86.7 48 83.3
SHI48245 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-13 82.8 60 70.0
SHI45329 Sapria himalayana HOM05D003729 ORTHO05D004384 1.4e-13 82.4 44 86.4
Haze_20208 Corylus avellana HOM05D003729 ORTHO05D004384 1.2e-12 79.3 55 60.0
Sabra16G0022500 Salix brachista HOM05D000075 ORTHO05D000073 2.7e-12 78.2 57 68.4
Oeu029504.1 Olea europaea HOM05D003729 ORTHO05D004384 2.0e-10 72.0 95 55.8
SHI50318 Sapria himalayana HOM05D003729 ORTHO05D004384 7.4e-10 70.1 176 35.8
SHI48244 Sapria himalayana HOM05D003729 ORTHO05D004384 1.1e-08 66.2 51 56.9
Sabra06G0025400 Salix brachista HOM05D003729 ORTHO05D004384 1.2e-07 62.8 34 70.6
SHI44104 Sapria himalayana HOM05D003729 ORTHO05D004384 2.0e-07 62.0 260 31.2
SHI50413 Sapria himalayana HOM05D003729 ORTHO05D004384 2.6e-07 61.6 193 33.2
QL01p046327 Quercus lobata HOM05D003729 ORTHO05D004384 7.7e-07 60.1 32 84.4
QL93p0119_0007 Quercus lobata HOM05D003729 ORTHO05D004384 7.7e-07 60.1 32 84.4
SHI54010 Sapria himalayana HOM05D003729 ORTHO05D004384 2.2e-06 58.5 32 84.4
Medtr8g007590 Medicago truncatula HOM05D003729 ORTHO05D004384 5.0e-06 57.4 47 51.1
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 8.5e-06 56.6 108 37.0


User provided reference genes

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