Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 5.8e-181 637.5 334 100.0
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 1.5e-149 533.1 332 84.3
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 1.3e-148 530.0 332 83.1
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 5.1e-145 518.1 329 79.6
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 7.4e-144 514.2 336 78.6
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 1.6e-143 513.1 341 78.6
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 6.2e-143 511.1 336 78.9
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 1.8e-142 509.6 331 78.2
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 6.9e-142 507.7 335 78.2
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 2.6e-141 505.8 340 78.5
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 3.4e-141 505.4 332 78.0
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 3.8e-140 501.9 336 76.8
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 4.9e-140 501.5 336 76.5
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 1.1e-139 500.4 335 77.0
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.4e-139 500.0 329 76.9
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 2.5e-139 499.2 340 75.3
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 5.5e-139 498.0 329 77.5
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 9.3e-139 497.3 335 76.7
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 1.6e-138 496.5 329 76.9
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 7.9e-138 494.2 338 76.3
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 1.8e-137 493.0 320 78.8
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 1.8e-137 493.0 331 76.1
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 2.3e-137 492.7 337 75.4
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 5.1e-137 491.5 331 76.4
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 8.7e-137 490.7 323 78.0
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 1.5e-136 490.0 338 74.3
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 1.9e-136 489.6 330 75.2
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 5.7e-136 488.0 337 76.3
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 5.7e-136 488.0 327 76.5
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 6.3e-135 484.6 340 76.8
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 6.3e-135 484.6 330 78.8
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 4.1e-134 481.9 327 75.5
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 5.3e-134 481.5 333 75.7
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 9.0e-134 480.7 332 75.0
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 1.5e-133 479.9 327 75.2
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 2.6e-133 479.2 333 74.2
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 4.5e-133 478.4 346 74.9
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 5.8e-133 478.0 327 75.2
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 5.8e-133 478.0 340 71.5
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 1.7e-132 476.5 337 73.6
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 1.1e-131 473.8 334 74.6
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 2.5e-131 472.6 330 72.7
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 4.2e-131 471.9 332 73.8
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 9.3e-131 470.7 327 74.0
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 2.1e-130 469.5 327 73.7
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 2.1e-130 469.5 346 71.7
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 2.7e-130 469.2 327 73.1
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 3.5e-130 468.8 334 73.4
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 3.5e-130 468.8 327 73.4
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 4.6e-130 468.4 313 77.0
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 6.1e-130 468.0 327 72.8
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 7.9e-130 467.6 327 73.1
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 3.0e-129 465.7 344 72.7
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 3.0e-129 465.7 340 70.6
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 8.7e-129 464.2 327 72.5
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 1.1e-128 463.8 327 71.9
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 1.1e-128 463.8 329 72.9
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 1.1e-128 463.8 329 72.9
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 1.9e-128 463.0 325 72.6
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 4.3e-128 461.8 336 72.6
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 7.4e-128 461.1 329 71.4
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 7.4e-128 461.1 329 72.0
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 1.6e-127 459.9 329 72.0
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.8e-127 459.1 320 73.8
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 3.7e-127 458.8 336 71.7
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 4.8e-127 458.4 329 71.4
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 4.1e-126 455.3 336 73.5
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 1.2e-125 453.8 370 68.6
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 2.6e-125 452.6 327 72.5
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 2.6e-125 452.6 335 71.9
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 5.9e-125 451.4 337 71.5
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 7.7e-125 451.1 336 72.6
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 7.7e-125 451.1 331 70.7
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 1.0e-124 450.7 274 83.2
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 2.2e-124 449.5 339 70.5
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 6.5e-124 448.0 366 67.8
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 1.2e-122 443.7 355 68.7
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 2.7e-122 442.6 364 66.2
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 2.7e-122 442.6 337 71.5
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 7.9e-122 441.0 301 73.8
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 1.4e-121 440.3 302 74.5
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 1.4e-121 440.3 316 74.4
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 3.9e-121 438.7 358 67.0
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 6.7e-121 438.0 363 64.7
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 1.3e-119 433.7 311 72.0
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 1.3e-119 433.7 408 61.5
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 1.7e-119 433.3 337 69.4
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 4.8e-119 431.8 338 68.0
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 1.4e-118 430.3 305 71.8
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 2.4e-118 429.5 307 71.0
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 6.5e-116 421.4 330 67.6
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 2.1e-114 416.4 276 77.9
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 3.9e-113 412.1 294 72.4
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 2.2e-111 406.4 305 71.1
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 1.1e-110 404.1 291 70.8
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 1.6e-109 400.2 338 61.5
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 2.2e-108 396.4 266 77.1
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 8.5e-108 394.4 322 64.6
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 1.8e-105 386.7 245 81.2
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 4.8e-103 378.6 305 66.2
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 9.1e-102 374.4 308 63.6
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 3.5e-101 372.5 333 62.5
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 1.5e-99 367.1 300 63.7
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 2.1e-98 363.2 213 87.8
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 1.8e-97 360.1 274 67.9
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 4.0e-97 359.0 248 73.0
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 1.3e-95 354.0 300 60.0
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 6.3e-95 351.7 239 79.1
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.5e-91 340.5 210 81.9
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 2.0e-88 330.1 301 55.8
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 7.0e-86 321.6 231 71.0
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 4.5e-85 318.9 207 78.3
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 4.9e-79 298.9 274 55.8
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 2.6e-72 276.6 196 72.4
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 2.9e-71 273.1 206 68.0
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 2.0e-69 266.9 169 80.5
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 2.1e-66 256.9 195 70.3
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 9.2e-62 241.5 317 42.0
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 8.9e-49 198.4 148 71.6
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 9.3e-46 188.3 276 41.7
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 2.3e-44 183.7 137 69.3
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 6.2e-34 149.1 104 71.2
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 4.6e-29 132.9 131 56.5
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 6.7e-28 129.0 97 69.1
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 3.3e-27 126.7 79 79.7
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 4.0e-25 119.8 224 37.5
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 2.0e-24 117.5 90 66.7
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 3.8e-23 113.2 246 36.6
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.3e-20 104.8 118 55.9
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 6.7e-20 102.4 91 59.3
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 4.8e-18 96.3 61 75.4
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 4.8e-18 96.3 62 75.8
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 8.2e-18 95.5 62 77.4
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.8e-17 94.4 62 77.4
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 5.3e-17 92.8 81 51.9
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 1.2e-16 91.7 84 50.0
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 2.9e-15 87.0 106 45.3
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 5.0e-15 86.3 58 75.9
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.4e-14 84.7 55 78.2
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 2.8e-10 70.5 37 78.4
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 1.5e-08 64.7 40 77.5
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 3.4e-08 63.5 36 83.3
SMO147G0023 Selaginella moellendorffii HOM05D005156 ORTHO05D376049 5.9e-08 62.8 123 35.0
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 7.7e-08 62.4 38 76.3
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 1.0e-07 62.0 37 78.4
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 1.0e-07 62.0 40 82.5


User provided reference genes

Program Settings