Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 6.8e-48 194.1 135 100.0
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 8.1e-33 144.1 134 56.0
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 9.9e-31 137.1 132 53.8
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.8e-24 116.3 131 46.6
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 1.5e-23 113.2 137 43.1
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 2.6e-23 112.5 134 46.3
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 1.7e-22 109.8 132 43.9
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 2.2e-22 109.4 131 45.8
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 1.4e-21 106.7 136 42.6
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 3.2e-21 105.5 138 42.8
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 1.6e-20 103.2 137 40.9
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 2.7e-20 102.4 135 43.0
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 2.7e-20 102.4 134 39.6
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 3.5e-20 102.1 135 43.0
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 3.5e-20 102.1 129 47.3
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 6.0e-20 101.3 129 42.6
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 6.0e-20 101.3 132 39.4
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 1.0e-19 100.5 134 41.8
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 1.3e-19 100.1 145 39.3
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 1.3e-19 100.1 131 43.5
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 1.3e-19 100.1 72 66.7
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 1.8e-19 99.8 134 40.3
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 2.3e-19 99.4 131 41.2
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 2.3e-19 99.4 71 63.4
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 3.9e-19 98.6 129 41.1
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 3.9e-19 98.6 138 42.0
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 8.7e-19 97.4 133 39.1
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 1.5e-18 96.7 130 39.2
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 1.9e-18 96.3 129 43.4
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 4.3e-18 95.1 131 40.5
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 9.6e-18 94.0 131 40.5
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 1.6e-17 93.2 58 69.0
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 3.6e-17 92.0 133 40.6
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 3.6e-17 92.0 131 41.2
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 6.2e-17 91.3 154 36.4
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 6.2e-17 91.3 154 36.4
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 8.1e-17 90.9 72 62.5
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 8.1e-17 90.9 72 62.5
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 1.1e-16 90.5 145 36.6
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 1.8e-16 89.7 135 37.8
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 1.8e-16 89.7 131 39.7
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 2.4e-16 89.4 132 39.4
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 3.1e-16 89.0 132 40.9
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 3.1e-16 89.0 141 39.0
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 4.0e-16 88.6 126 38.9
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 1.2e-15 87.0 135 37.8
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 2.0e-15 86.3 50 76.0
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 2.6e-15 85.9 71 57.7
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 4.5e-15 85.1 151 34.4
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 5.8e-15 84.7 151 32.5
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 9.9e-15 84.0 163 34.4
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 1.3e-14 83.6 144 39.6
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 1.7e-14 83.2 71 53.5
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 1.7e-14 83.2 146 34.2
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 2.2e-14 82.8 147 36.1
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 2.2e-14 82.8 48 68.8
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 3.8e-14 82.0 54 66.7
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 6.4e-14 81.3 65 52.3
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 1.1e-13 80.5 130 36.9
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 1.4e-13 80.1 145 34.5
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 4.2e-13 78.6 50 66.0
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 5.5e-13 78.2 67 50.7
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 7.1e-13 77.8 54 66.7
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 9.3e-13 77.4 85 49.4
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 1.6e-12 76.6 54 64.8
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 1.6e-12 76.6 132 34.8
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 2.1e-12 76.3 61 54.1
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 2.1e-12 76.3 38 81.6
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 2.7e-12 75.9 129 34.1
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 3.5e-12 75.5 151 31.8
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 6.0e-12 74.7 133 33.1
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 7.9e-12 74.3 48 60.4
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 1.0e-11 73.9 168 31.5
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 1.0e-11 73.9 61 52.5
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 1.3e-11 73.6 158 29.1
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 3.0e-11 72.4 72 52.8
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 5.1e-11 71.6 132 32.6
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 5.1e-11 71.6 141 33.3
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 1.5e-10 70.1 158 31.0
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.5e-10 70.1 161 31.1
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 9.6e-10 67.4 45 60.0
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 1.3e-09 67.0 162 31.5
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 1.6e-09 66.6 48 56.2
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 2.8e-09 65.9 162 32.1
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 3.7e-09 65.5 70 48.6
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 4.8e-09 65.1 50 56.0
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 8.2e-09 64.3 70 48.6
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 8.2e-09 64.3 52 53.8
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 1.1e-08 63.9 60 45.0
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 1.8e-08 63.2 46 56.5
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 1.8e-08 63.2 44 59.1
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 4.0e-08 62.0 40 60.0
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 1.5e-07 60.1 41 61.0
SalBow4G1478 Salvia bowleyana HOM05D006778 ORTHO05D008341 2.6e-07 59.3 46 63.0
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 7.6e-07 57.8 62 45.2


User provided reference genes

Program Settings