Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 1.3e-213 746.1 379 100.0
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 1.2e-147 526.9 379 72.8
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 5.2e-138 495.0 381 69.6
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 9.0e-138 494.2 398 68.6
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 1.4e-127 460.3 383 65.0
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 1.9e-127 459.9 382 63.1
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 1.6e-126 456.8 382 63.1
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 3.3e-124 449.1 382 62.0
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 5.6e-124 448.4 383 62.7
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.4e-122 443.0 383 61.9
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 1.7e-120 436.8 383 63.7
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 4.9e-120 435.3 383 61.1
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 1.1e-119 434.1 383 61.6
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 3.2e-119 432.6 383 59.8
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 9.3e-119 431.0 384 59.6
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 3.5e-118 429.1 382 60.2
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 1.5e-116 423.7 383 60.1
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 2.1e-115 419.9 379 59.1
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 2.8e-115 419.5 381 60.1
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 2.4e-114 416.4 380 58.2
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 3.1e-114 416.0 383 59.3
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 1.3e-112 410.6 381 58.5
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 2.2e-112 409.8 381 59.6
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 3.2e-111 406.0 389 58.1
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 3.5e-110 402.5 383 56.7
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 4.6e-110 402.1 382 58.1
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 1.3e-109 400.6 381 56.4
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 1.8e-109 400.2 382 56.3
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 3.0e-109 399.4 381 57.7
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 3.9e-109 399.1 384 57.3
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 5.1e-109 398.7 380 57.6
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 8.7e-109 397.9 381 55.9
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 1.1e-108 397.5 385 58.7
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 2.5e-108 396.4 385 57.4
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 1.6e-107 393.7 382 57.1
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 1.4e-106 390.6 379 57.3
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.8e-106 390.2 383 56.1
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.1e-106 389.4 385 56.6
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 5.3e-106 388.7 382 56.8
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 7.6e-105 384.8 379 54.6
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 1.0e-104 384.4 379 55.7
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 1.7e-104 383.6 381 54.9
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 2.9e-104 382.9 380 56.8
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 1.4e-103 380.6 384 56.0
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 1.9e-103 380.2 379 55.4
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 5.5e-103 378.6 379 56.7
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 7.2e-103 378.3 379 56.5
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 1.2e-102 377.5 383 55.9
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 2.7e-102 376.3 380 57.1
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 1.0e-101 374.4 381 54.1
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 1.4e-101 374.0 382 56.0
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 3.9e-101 372.5 379 55.9
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 2.5e-100 369.8 383 56.4
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 2.2e-99 366.7 384 55.2
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 4.8e-99 365.5 383 54.8
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 1.1e-98 364.4 380 55.8
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 1.8e-98 363.6 381 53.5
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 2.4e-98 363.2 381 54.6
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 4.1e-98 362.5 380 55.5
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 9.1e-98 361.3 383 55.9
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 4.5e-97 359.0 383 54.6
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 8.5e-96 354.8 385 50.4
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 9.4e-95 351.3 402 52.5
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 2.7e-94 349.7 385 52.2
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 1.4e-93 347.4 379 52.8
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 6.7e-93 345.1 386 51.0
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 1.5e-92 344.0 338 57.7
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 4.4e-92 342.4 394 49.0
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 6.3e-91 338.6 386 50.0
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 1.8e-90 337.0 386 52.1
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 1.8e-90 337.0 352 50.9
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 5.3e-90 335.5 385 51.7
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 1.3e-88 330.9 379 52.2
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.9e-88 329.7 385 51.2
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 2.9e-88 329.7 385 51.2
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 6.5e-88 328.6 385 50.9
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 1.9e-87 327.0 385 50.6
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 4.2e-87 325.9 385 49.9
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 7.2e-87 325.1 389 50.6
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 9.4e-87 324.7 386 48.7
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 1.2e-86 324.3 385 49.6
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 1.6e-86 323.9 389 50.6
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 2.1e-86 323.6 388 50.3
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 3.6e-86 322.8 386 50.0
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 8.8e-85 318.2 379 51.2
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 8.8e-85 318.2 389 49.4
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 1.5e-84 317.4 392 49.5
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 4.5e-81 305.8 391 44.2
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 5.9e-81 305.4 409 47.2
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 7.2e-79 298.5 385 48.1
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 7.2e-79 298.5 390 45.1
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 7.2e-71 271.9 287 54.7
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 7.5e-68 261.9 322 50.9
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 1.4e-66 257.7 261 53.3
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 7.2e-63 245.4 393 41.2
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 6.8e-61 238.8 228 60.5
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 2.7e-57 226.9 382 39.3
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 7.8e-57 225.3 201 56.7
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 7.8e-57 225.3 261 47.9
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 1.0e-56 224.9 392 37.5
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 3.3e-55 219.9 170 70.6
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 2.0e-49 200.7 170 64.1
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 3.5e-49 199.9 377 36.6
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 1.6e-46 191.0 233 46.8
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 2.1e-46 190.7 171 62.6
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 5.1e-40 169.5 378 33.6
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 6.6e-40 169.1 182 50.0
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 4.7e-38 162.9 283 36.7
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 5.2e-37 159.5 166 51.8
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 6.4e-27 125.9 195 39.5
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 6.4e-27 125.9 195 39.0
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.0e-24 118.6 174 44.3
FAN17G0046 Fragaria x ananassa HOM05D006028 ORTHO05D007784 3.9e-24 116.7 161 42.9
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 1.1e-23 115.2 166 41.6
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 1.9e-23 114.4 142 52.1
Sabra17G0095800 Salix brachista HOM05D006028 ORTHO05D007784 4.3e-23 113.2 172 45.3
Nitab4.5_0014016g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 2.8e-14 84.0 82 48.8
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 4.5e-12 76.6 105 41.9
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 7.6e-12 75.9 77 55.8
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.9e-11 73.9 98 43.9
SEGI_36511 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 3.0e-08 63.9 81 44.4
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 4.3e-07 60.1 280 26.8


User provided reference genes

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