Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 7.6e-171 604.0 358 100.0
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 2.7e-91 339.7 362 62.7
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.8e-79 300.4 303 56.8
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 1.2e-78 297.7 305 58.0
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 2.1e-75 287.0 272 61.4
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 6.0e-75 285.4 284 65.8
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 6.0e-75 285.4 284 65.8
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 8.1e-72 275.0 277 70.4
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 8.1e-72 275.0 336 56.0
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.6e-70 270.0 272 61.4
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 4.4e-70 269.2 309 56.3
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 2.2e-69 266.9 263 58.2
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 3.7e-69 266.2 284 59.2
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 3.2e-68 263.1 391 52.4
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 2.7e-67 260.0 324 58.6
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 7.8e-67 258.5 270 55.9
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 1.3e-66 257.7 359 55.7
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 8.6e-66 255.0 338 53.3
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 2.5e-65 253.4 282 57.4
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 4.3e-65 252.7 312 53.5
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 1.6e-64 250.8 272 54.4
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 1.6e-64 250.8 354 50.0
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 2.1e-64 250.4 345 53.3
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 6.2e-64 248.8 332 52.7
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 6.2e-64 248.8 321 53.0
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 6.2e-64 248.8 353 49.3
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 4.0e-63 246.1 269 62.8
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 5.2e-63 245.7 288 55.6
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 5.2e-63 245.7 270 59.3
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 1.5e-62 244.2 339 47.5
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 2.6e-62 243.4 269 57.6
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 4.4e-62 242.7 282 55.0
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 5.8e-62 242.3 343 49.9
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 7.6e-62 241.9 292 56.2
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 2.2e-61 240.4 283 61.1
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 2.2e-61 240.4 306 53.3
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 2.2e-61 240.4 336 56.0
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 2.2e-61 240.4 320 50.9
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 2.2e-61 240.4 343 47.8
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 3.8e-61 239.6 295 51.9
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 4.9e-61 239.2 316 50.0
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 8.4e-61 238.4 338 51.8
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 1.1e-60 238.0 272 61.8
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 1.4e-60 237.7 350 50.6
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 5.4e-60 235.7 349 45.0
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 7.1e-60 235.3 272 51.1
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 1.2e-59 234.6 283 55.5
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 1.2e-59 234.6 305 54.1
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 1.2e-59 234.6 273 59.7
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 1.6e-59 234.2 345 46.4
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 2.7e-59 233.4 281 54.8
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 2.7e-59 233.4 274 55.5
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 6.0e-59 232.3 300 49.7
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 7.8e-59 231.9 264 54.9
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 2.3e-58 230.3 353 45.0
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 5.1e-58 229.2 285 57.5
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 1.1e-57 228.0 301 54.8
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 1.5e-57 227.6 274 54.7
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.5e-57 226.9 323 50.8
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 3.3e-57 226.5 274 56.9
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 4.3e-57 226.1 303 46.2
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 5.6e-57 225.7 304 47.4
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 5.6e-57 225.7 373 44.2
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 7.3e-57 225.3 311 53.1
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.2e-56 224.6 323 50.8
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 1.6e-56 224.2 323 52.9
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 8.1e-56 221.9 298 54.0
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 5.2e-55 219.2 267 55.1
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 5.2e-55 219.2 356 48.9
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 5.2e-55 219.2 354 49.2
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 5.2e-55 219.2 333 49.8
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 2.0e-54 217.2 283 57.6
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 2.6e-54 216.9 268 54.9
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 3.4e-54 216.5 322 51.6
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 4.4e-54 216.1 272 57.0
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 5.8e-54 215.7 275 55.3
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 9.9e-54 214.9 287 54.0
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 3.8e-53 213.0 277 53.4
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 1.1e-52 211.5 265 56.2
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 1.4e-52 211.1 264 57.2
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 1.4e-52 211.1 268 57.5
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 3.2e-52 209.9 263 50.2
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 4.2e-52 209.5 339 49.0
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 5.4e-52 209.1 307 51.8
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 5.4e-52 209.1 262 57.3
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 1.2e-51 208.0 257 55.6
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.2e-51 208.0 185 61.6
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 1.2e-51 208.0 176 60.2
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 3.5e-51 206.5 339 49.3
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 7.8e-51 205.3 181 61.9
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 1.3e-50 204.5 238 64.7
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 1.7e-50 204.1 258 55.8
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 5.1e-50 202.6 302 47.4
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 1.9e-49 200.7 323 45.5
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 2.1e-48 197.2 264 48.9
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 7.6e-46 188.7 162 64.2
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 9.9e-46 188.3 265 49.1
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 2.9e-45 186.8 159 60.4
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 1.1e-44 184.9 266 52.3
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 1.3e-42 177.9 152 63.8
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 5.3e-39 166.0 125 67.2
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 9.3e-36 155.2 267 48.7
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 2.6e-30 137.1 277 42.6
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 2.4e-23 114.0 342 35.7
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 2.0e-22 110.9 255 37.3
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 6.5e-21 105.9 113 51.3
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 3.9e-18 96.7 118 44.9
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 3.1e-15 87.0 56 71.4
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 1.7e-13 81.3 245 31.8
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 2.5e-12 77.4 45 73.3
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 3.0e-10 70.5 54 57.4
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 7.4e-09 65.9 140 33.6
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 2.2e-08 64.3 101 44.6
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 9.1e-07 58.9 84 42.9


User provided reference genes

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