Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 0.0e+00 1118.2 606 100.0
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 1.7e-247 859.4 576 80.6
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 1.9e-243 845.9 567 78.8
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 2.6e-232 808.9 593 75.5
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 1.4e-220 770.0 586 70.5
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 1.3e-207 726.9 574 69.0
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 5.0e-175 618.6 573 58.3
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 2.3e-172 609.8 577 57.5
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 6.2e-165 585.1 575 56.9
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 6.8e-164 581.6 580 59.0
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 4.9e-162 575.5 576 57.3
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 4.1e-161 572.4 588 54.8
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 2.1e-160 570.1 576 55.2
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 1.8e-156 557.0 466 65.5
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 2.0e-155 553.5 580 56.6
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 6.6e-151 538.5 544 55.1
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 1.1e-150 537.7 583 54.9
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 3.3e-150 536.2 591 51.4
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 1.1e-148 531.2 561 56.1
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.4e-148 530.0 584 53.3
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 1.7e-146 523.9 577 51.5
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 6.4e-146 521.9 573 54.5
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 7.1e-145 518.5 589 53.0
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 1.6e-144 517.3 565 54.9
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.6e-144 517.3 570 52.5
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 4.6e-144 515.8 589 52.6
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 3.0e-143 513.1 580 51.6
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 1.5e-142 510.8 589 52.6
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 9.9e-139 498.0 571 52.4
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 2.9e-138 496.5 578 49.5
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 9.3e-137 491.5 574 47.0
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 3.5e-136 489.6 571 48.9
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 4.6e-136 489.2 539 48.6
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 1.5e-134 484.2 590 50.3
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 1.6e-133 480.7 581 49.1
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 2.1e-133 480.3 598 52.3
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.1e-133 480.3 572 50.7
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 8.1e-133 478.4 501 54.9
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 1.8e-132 477.2 535 49.7
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 4.0e-132 476.1 597 47.7
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 5.3e-132 475.7 588 45.9
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 5.3e-132 475.7 564 47.7
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 9.0e-132 474.9 576 47.6
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 1.2e-131 474.6 566 48.6
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.2e-131 474.6 539 48.4
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 2.0e-131 473.8 572 49.5
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 2.0e-131 473.8 547 48.1
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 2.6e-131 473.4 573 47.6
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 3.4e-131 473.0 566 48.6
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.5e-131 472.6 575 48.9
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 5.8e-131 472.2 579 47.0
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 7.6e-131 471.9 584 46.7
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 7.6e-131 471.9 566 47.2
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 2.9e-130 469.9 574 46.5
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 6.4e-130 468.8 566 48.1
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 1.1e-129 468.0 566 47.2
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 1.4e-129 467.6 561 47.1
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 5.5e-129 465.7 581 46.3
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 5.5e-129 465.7 519 49.1
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 1.6e-128 464.2 581 47.7
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 2.7e-128 463.4 566 46.5
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 2.7e-128 463.4 566 46.5
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 1.8e-127 460.7 562 50.4
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 3.9e-127 459.5 579 46.3
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 8.7e-127 458.4 536 46.6
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 1.1e-126 458.0 565 45.8
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 2.5e-126 456.8 575 49.7
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 5.6e-126 455.7 571 46.8
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 2.1e-125 453.8 597 47.4
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 6.2e-125 452.2 588 45.6
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.4e-124 450.3 567 49.2
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.4e-124 450.3 462 57.1
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 2.4e-124 450.3 584 45.7
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 6.9e-124 448.7 580 46.0
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 5.8e-123 445.7 582 45.4
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 5.8e-123 445.7 550 46.0
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 1.0e-122 444.9 573 46.1
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 1.3e-122 444.5 638 42.9
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 4.9e-122 442.6 579 44.2
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 6.5e-122 442.2 550 46.0
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.4e-121 441.0 580 43.4
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 1.4e-121 441.0 531 45.8
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 9.3e-121 438.3 542 44.8
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 1.8e-119 434.1 565 45.3
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 3.9e-119 433.0 555 47.6
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 6.7e-119 432.2 588 43.7
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 1.9e-118 430.6 588 43.4
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.5e-118 430.3 562 43.8
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 4.3e-118 429.5 566 45.1
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 9.0e-116 421.8 534 47.0
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 9.0e-116 421.8 568 44.5
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 1.2e-115 421.4 533 44.7
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 1.0e-114 418.3 536 44.8
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 8.4e-114 415.2 591 41.6
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 1.9e-113 414.1 473 50.5
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 1.9e-110 404.1 461 54.2
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.5e-110 403.7 562 43.8
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 3.3e-110 403.3 582 44.7
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 1.8e-108 397.5 579 43.5
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 4.1e-108 396.4 571 44.1
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 1.5e-107 394.4 533 42.8
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 1.7e-106 391.0 571 41.3
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 2.2e-106 390.6 535 44.3
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 1.1e-105 388.3 573 40.7
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 1.1e-105 388.3 573 40.7
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 1.2e-104 384.8 573 40.5
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 1.1e-102 378.3 573 40.0
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 1.5e-102 377.9 381 55.6
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 9.7e-102 375.2 575 40.0
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 1.3e-101 374.8 575 40.2
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 6.3e-101 372.5 573 40.3
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 8.2e-101 372.1 533 40.5
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 1.8e-100 370.9 573 40.1
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.4e-100 370.5 356 57.9
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 3.1e-100 370.2 572 41.1
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 1.5e-99 367.9 565 41.8
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.2e-96 358.2 389 49.6
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 1.5e-94 351.3 463 46.4
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 1.2e-91 341.7 558 38.0
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 2.0e-91 340.9 440 46.1
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 1.5e-89 334.7 489 45.0
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 3.6e-88 330.1 427 43.8
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 4.1e-84 316.6 573 36.8
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 2.0e-83 314.3 575 40.3
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 4.5e-83 313.2 261 62.1
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 1.8e-79 301.2 532 36.5
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.4e-76 290.8 256 58.6
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 7.7e-67 259.2 414 38.2
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 6.1e-64 249.6 447 38.3
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 4.6e-59 233.4 245 49.8
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 2.2e-53 214.5 401 36.4
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 9.2e-52 209.1 321 39.9
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 1.3e-50 205.3 339 38.1
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 4.3e-49 200.3 245 44.5
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 4.0e-47 193.7 255 49.4
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.9e-41 174.9 256 43.4
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 9.9e-38 162.5 533 24.8
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 3.8e-37 160.6 157 53.5
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 3.8e-37 160.6 522 27.0
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.6e-35 155.2 146 55.5
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.7e-35 154.5 146 54.8
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 4.6e-35 153.7 542 27.7
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 2.1e-32 144.8 603 25.9
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 2.1e-32 144.8 539 26.2
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 2.1e-32 144.8 545 24.6
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 1.1e-31 142.5 162 42.6
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 1.8e-31 141.7 154 47.4
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 4.0e-31 140.6 217 44.7
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 8.9e-31 139.4 144 49.3
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 6.4e-29 133.3 164 45.7
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.4e-28 131.3 146 47.3
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 4.6e-27 127.1 147 42.2
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 4.3e-25 120.6 159 41.5
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 4.8e-24 117.1 105 61.0
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.4e-23 115.5 172 41.9
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.5e-22 112.1 109 50.5
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.9e-21 107.8 109 48.6
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 4.9e-21 107.1 123 48.8
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 7.1e-20 103.2 131 42.7
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 1.2e-19 102.4 141 39.7
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.1e-19 101.7 94 50.0
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 4.6e-19 100.5 162 35.2
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 1.3e-16 92.4 567 22.2
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 3.1e-15 87.8 128 43.0
GSVIVG01038756001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.8e-14 83.6 93 46.2
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 9.9e-14 82.8 78 56.4
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 1.3e-13 82.4 73 58.9
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.3e-13 82.4 119 46.2
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 2.4e-12 78.2 204 27.0
GSVIVG01023027001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.5e-12 77.0 64 54.7
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.0e-10 72.8 65 60.0
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.0e-10 72.8 65 60.0
ATR0193G025 Amborella trichopoda HOM05D003578 ORTHO05D004021 2.3e-10 71.6 131 32.1
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 2.3e-10 71.6 84 40.5
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea HOM05D003578 ORTHO05D004021 3.0e-10 71.2 71 46.5
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 6.7e-10 70.1 85 47.1
Pp3c11_11580 Physcomitrium patens HOM05D003578 ORTHO05D004021 1.5e-09 68.9 471 21.4
Atru.chr6.1018 Acer truncatum HOM05D003578 ORTHO05D004021 1.6e-08 65.5 69 43.5
ATR0686G029 Amborella trichopoda HOM05D003578 ORTHO05D004021 6.2e-08 63.5 109 32.1
FAN11G2867 Fragaria x ananassa HOM05D001988 ORTHO05D006298 3.1e-07 61.2 61 49.2
Sopen01g047030 Solanum pennellii HOM05D003578 ORTHO05D004021 5.3e-07 60.5 55 54.5
Actinidia17466 Actinidia chinensis HOM05D003578 ORTHO05D004021 2.6e-06 58.2 150 32.7


User provided reference genes

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