Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 8.4e-134 480.3 238 100.0
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 1.8e-91 339.7 193 80.3
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 3.1e-88 328.9 224 71.4
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 2.2e-86 322.8 224 70.1
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 1.1e-85 320.5 239 66.9
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 9.4e-85 317.4 230 67.0
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 4.7e-84 315.1 208 71.6
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 7.5e-82 307.8 214 66.8
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.3e-81 307.0 190 72.1
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 1.3e-81 307.0 220 66.4
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 2.2e-81 306.2 199 71.9
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 3.7e-81 305.4 205 71.2
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 3.7e-81 305.4 199 70.9
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 8.2e-81 304.3 188 73.4
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 1.8e-80 303.1 230 66.1
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 2.4e-80 302.8 199 71.4
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 2.4e-80 302.8 216 68.1
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 2.0e-79 299.7 233 64.4
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 2.7e-79 299.3 199 70.4
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 2.7e-79 299.3 210 66.2
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 4.5e-79 298.5 201 70.6
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 1.0e-78 297.4 213 66.2
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 1.7e-78 296.6 206 68.9
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 5.0e-78 295.0 243 63.4
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 8.5e-78 294.3 192 70.3
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 8.5e-78 294.3 215 67.0
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.1e-77 293.9 190 71.6
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 1.5e-77 293.5 229 62.9
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.5e-77 292.7 193 69.9
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 2.5e-77 292.7 193 69.9
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 4.2e-77 292.0 202 69.3
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 7.2e-77 291.2 237 60.3
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 7.2e-77 291.2 216 64.8
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 2.1e-76 289.7 224 62.9
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 2.7e-76 289.3 186 70.4
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 3.6e-76 288.9 223 63.7
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 8.0e-76 287.7 239 60.3
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 1.8e-75 286.6 216 64.8
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 6.8e-75 284.6 193 69.4
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 8.8e-75 284.3 228 61.0
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 1.2e-74 283.9 193 68.9
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 1.5e-74 283.5 185 69.7
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 1.5e-74 283.5 190 68.9
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 2.0e-74 283.1 193 69.4
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 2.0e-74 283.1 217 65.0
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 2.0e-74 283.1 212 62.3
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 3.4e-74 282.3 193 69.4
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 3.4e-74 282.3 199 66.8
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 4.4e-74 282.0 192 66.7
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 5.7e-74 281.6 193 69.4
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 5.7e-74 281.6 239 58.6
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 7.5e-74 281.2 193 68.9
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 7.5e-74 281.2 193 68.4
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 7.5e-74 281.2 199 67.3
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 9.8e-74 280.8 199 65.8
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 1.7e-73 280.0 216 64.8
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 2.2e-73 279.6 216 60.6
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 3.7e-73 278.9 190 66.8
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 8.3e-73 277.7 190 67.9
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.4e-72 276.9 197 68.0
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 1.4e-72 276.9 193 68.9
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 7.0e-72 274.6 193 68.9
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 7.7e-71 271.2 186 68.3
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 1.3e-70 270.4 200 64.5
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.7e-70 270.0 214 60.3
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 4.2e-69 265.4 182 68.1
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.2e-68 263.8 175 68.6
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 4.7e-68 261.9 192 64.1
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 3.0e-67 259.2 198 64.1
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 3.0e-67 259.2 202 62.4
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 3.8e-62 242.3 190 61.1
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 6.1e-60 235.0 181 64.1
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 2.0e-58 229.9 185 58.4
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 9.2e-56 221.1 168 66.1
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.7e-54 216.9 185 56.8
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 3.0e-54 216.1 187 54.5
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 6.2e-52 208.4 180 58.3
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 2.0e-50 203.4 181 55.8
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 4.4e-50 202.2 192 55.2
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 4.4e-50 202.2 139 66.2
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.5e-45 187.2 136 65.4
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 3.6e-44 182.6 109 78.0
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 2.6e-42 176.4 122 71.3
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 2.4e-40 169.9 227 40.5
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 4.3e-37 159.1 169 53.8
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 8.1e-36 154.8 198 42.9
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 6.4e-33 145.2 87 72.4
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 6.6e-30 135.2 141 51.1
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 2.5e-29 133.3 102 64.7
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 1.1e-27 127.9 95 66.3
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.4e-27 126.7 80 70.0
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 4.4e-26 122.5 198 39.4
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 1.7e-25 120.6 118 52.5
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 1.0e-14 84.7 55 72.7
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 4.8e-12 75.9 112 40.2


User provided reference genes

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