Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.14113 Avicennia marina HOM05D003145 ORTHO05D003586 1.5e-73 279.6 165 100.0
MSTRG.134 Avicennia marina HOM05D003145 ORTHO05D003586 2.3e-58 229.2 177 83.6
Migut.F01191 Erythranthe guttata HOM05D003145 ORTHO05D003586 5.1e-37 158.3 162 57.4
Oeu042538.1 Olea europaea HOM05D003145 ORTHO05D003586 8.4e-32 141.0 187 60.4
Dinv06577 Davidia involucrata HOM05D003145 ORTHO05D003586 1.3e-29 133.7 166 53.6
unitig_85.g27171 Utricularia gibba HOM05D003145 ORTHO05D003586 5.6e-28 128.3 161 55.3
TAR503G0001 Trochodendron aralioides HOM05D003145 ORTHO05D003586 9.6e-28 127.5 162 47.5
TAR629G0158 Trochodendron aralioides HOM05D003145 ORTHO05D003586 9.6e-28 127.5 162 47.5
Nitab4.5_0002211g0070 Nicotiana tabacum HOM05D003145 ORTHO05D003586 2.1e-27 126.3 183 53.0
QL07p001538 Quercus lobata HOM05D003145 ORTHO05D003586 3.6e-27 125.6 167 48.5
Peaxi162Scf00271g00086 Petunia axillaris HOM05D003145 ORTHO05D003586 1.3e-24 117.1 161 57.1
Sopen05g030550 Solanum pennellii HOM05D003145 ORTHO05D003586 2.2e-24 116.3 143 55.9
TAR374G0068 Trochodendron aralioides HOM05D003145 ORTHO05D003586 2.9e-24 115.9 173 43.4
Ciclev10004301m.g Citrus clementina HOM05D003145 ORTHO05D003586 4.9e-24 115.2 171 46.8
unitig_578.g16620 Utricularia gibba HOM05D003145 ORTHO05D003586 1.1e-23 114.0 161 52.2
Nitab4.5_0003647g0050 Nicotiana tabacum HOM05D003145 ORTHO05D003586 1.4e-23 113.6 183 49.7
PGSC0003DMG400007237 Solanum tuberosum HOM05D003145 ORTHO05D003586 3.2e-23 112.5 172 50.0
RcHm_v2.0_Chr1g0374011 Rosa chinensis HOM05D003145 ORTHO05D003586 2.1e-22 109.8 163 44.8
Gohir.D09G250000 Gossypium hirsutum HOM05D003145 ORTHO05D003586 4.6e-22 108.6 166 45.2
MD07G1251300 Malus domestica HOM05D003145 ORTHO05D003586 1.0e-21 107.5 165 44.2
Gorai.006G274400 Gossypium raimondii HOM05D003145 ORTHO05D003586 1.8e-21 106.7 164 45.1
Nitab4.5_0001358g0070 Nicotiana tabacum HOM05D003145 ORTHO05D003586 2.3e-21 106.3 155 54.2
MBI19_g34824_MAGBIO Magnolia biondii HOM05D003145 ORTHO05D003586 3.0e-21 105.9 157 45.2
Hma1.2p1_1132F.1_g260190 Hydrangea macrophylla HOM05D003145 ORTHO05D003586 2.5e-20 102.8 165 45.5
Thecc.03G152600 Theobroma cacao HOM05D003145 ORTHO05D003586 2.5e-20 102.8 171 42.7
Nn1g00938 Nelumbo nucifera HOM05D003145 ORTHO05D003586 1.3e-19 100.5 157 45.9
Sopen05g030540 Solanum pennellii HOM05D003145 ORTHO05D003586 1.3e-19 100.5 141 51.1
SGA_v2.0_scaffold56G19933 Striga asiatica HOM05D003145 ORTHO05D003586 4.8e-19 98.6 173 46.2
Dinv21655 Davidia involucrata HOM05D003145 ORTHO05D003586 8.1e-19 97.8 167 44.3
CAN.G485.1 Capsicum annuum HOM05D003145 ORTHO05D003586 1.4e-18 97.1 165 45.5
Haze_21280 Corylus avellana HOM05D003145 ORTHO05D003586 3.1e-18 95.9 160 43.1
CAN.G485.3 Capsicum annuum HOM05D003145 ORTHO05D003586 4.0e-18 95.5 165 52.7
Peaxi162Scf00167g00074 Petunia axillaris HOM05D003145 ORTHO05D003586 4.0e-18 95.5 103 56.3
CANSAT25G1244 Cannabis sativa HOM05D003145 ORTHO05D003586 5.3e-18 95.1 191 40.8
TWI23G0972 Tripterygium wilfordii HOM05D003145 ORTHO05D003586 5.3e-18 95.1 144 44.4
CSS0050372 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 6.9e-18 94.7 89 57.3
Sabra03G0074000 Salix brachista HOM05D003145 ORTHO05D003586 9.0e-18 94.4 174 41.4
MD01G1181200 Malus domestica HOM05D003145 ORTHO05D003586 1.2e-17 94.0 165 40.0
Solyc03g093350.4 Solanum lycopersicum HOM05D003145 ORTHO05D003586 2.0e-17 93.2 181 40.9
Lalb_Chr23g0277171 Lupinus albus HOM05D003145 ORTHO05D003586 2.6e-17 92.8 190 40.0
SGA_v2.0_scaffold136G35006 Striga asiatica HOM05D003145 ORTHO05D003586 5.8e-17 91.7 135 52.6
TWI39G0360 Tripterygium wilfordii HOM05D003145 ORTHO05D003586 5.8e-17 91.7 94 56.4
Sed0018340 Sechium edule HOM05D003145 ORTHO05D003586 9.9e-17 90.9 167 41.3
CAN.G937.7 Capsicum annuum HOM05D003145 ORTHO05D003586 1.3e-16 90.5 199 43.7
MBI04_g33337_MAGBIO Magnolia biondii HOM05D003145 ORTHO05D003586 1.3e-16 90.5 155 52.9
Cfa012923 Carpinus fangiana HOM05D003145 ORTHO05D003586 2.2e-16 89.7 140 47.9
FAN05G5489 Fragaria x ananassa HOM05D003145 ORTHO05D003586 2.2e-16 89.7 166 44.0
Cc02_g04460 Coffea canephora HOM05D003145 ORTHO05D003586 2.9e-16 89.4 188 49.5
Sc03g0004080 Simmondsia chinensis HOM05D003145 ORTHO05D003586 2.9e-16 89.4 160 44.4
DCAR_004968 Daucus carota HOM05D003145 ORTHO05D003586 4.9e-16 88.6 164 39.6
Prupe.2G275100 Prunus persica HOM05D003145 ORTHO05D003586 4.9e-16 88.6 165 41.2
Sed0023038 Sechium edule HOM05D003145 ORTHO05D003586 4.9e-16 88.6 166 39.8
PGSC0003DMG400018847 Solanum tuberosum HOM05D003145 ORTHO05D003586 4.9e-16 88.6 133 44.4
Potri.001G126400 Populus trichocarpa HOM05D003145 ORTHO05D003586 6.4e-16 88.2 161 42.9
Medtr4g036415 Medicago truncatula HOM05D003145 ORTHO05D003586 8.4e-16 87.8 182 37.9
Rhsim07G0110700 Rhododendron simsii HOM05D003145 ORTHO05D003586 1.9e-15 86.7 167 41.3
Glyma.12G005900 Glycine max HOM05D003145 ORTHO05D003586 2.4e-15 86.3 183 38.8
TPR.G3659 Trifolium pratense HOM05D003145 ORTHO05D003586 2.4e-15 86.3 180 37.8
Nitab4.5_0001267g0100 Nicotiana tabacum HOM05D003145 ORTHO05D003586 4.2e-15 85.5 154 50.6
DCAR_008506 Daucus carota HOM05D003145 ORTHO05D003586 9.3e-15 84.3 151 44.4
Sopen03g024150 Solanum pennellii HOM05D003145 ORTHO05D003586 1.2e-14 84.0 194 38.7
Glyma.09G230800 Glycine max HOM05D003145 ORTHO05D003586 2.7e-14 82.8 158 39.2
MELO3C017657.2 Cucumis melo HOM05D003145 ORTHO05D003586 4.6e-14 82.0 166 41.0
Gohir.A09G249100 Gossypium hirsutum HOM05D003145 ORTHO05D003586 6.0e-14 81.6 164 44.5
CSS0016680 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 1.0e-13 80.9 164 39.6
CSS0017778 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 1.0e-13 80.9 164 39.6
Phvul.011G006700 Phaseolus vulgaris HOM05D003145 ORTHO05D003586 2.3e-13 79.7 185 37.3
arahy.Tifrunner.gnm1.ann1.KJW9ZT Arachis hypogaea HOM05D003145 ORTHO05D003586 3.0e-13 79.3 193 38.9
Aqoxy5G03819 Aquilegia oxysepala HOM05D003145 ORTHO05D003586 3.9e-13 79.0 162 40.1
vmacro14067 Vaccinium macrocarpon HOM05D003145 ORTHO05D003586 5.1e-13 78.6 168 38.7
Ah.02g123120 Amaranthus hybridus HOM05D003145 ORTHO05D003586 6.7e-13 78.2 151 41.7
AT5G51300 Arabidopsis thaliana HOM05D003145 ORTHO05D003586 8.7e-13 77.8 205 35.1
HanXRQChr17g0549361 Helianthus annuus HOM05D003145 ORTHO05D003586 1.5e-12 77.0 163 38.7
Ca_12622_v3 Cicer arietinum L. HOM05D003145 ORTHO05D003586 1.9e-12 76.6 185 35.7
CsaV3_4G004070 Cucumis sativus L. HOM05D003145 ORTHO05D003586 1.9e-12 76.6 166 38.6
FAN02G1498 Fragaria x ananassa HOM05D003145 ORTHO05D003586 2.5e-12 76.3 159 39.0
FAN06G1760 Fragaria x ananassa HOM05D003145 ORTHO05D003586 2.5e-12 76.3 157 38.9
HanXRQChr14g0461281 Helianthus annuus HOM05D003145 ORTHO05D003586 3.3e-12 75.9 162 38.3
Atru.chr1.828 Acer truncatum HOM05D003145 ORTHO05D003586 4.3e-12 75.5 189 41.3
CiPaw.08G001500 Carya illinoinensis HOM05D003145 ORTHO05D003586 4.3e-12 75.5 196 36.2
Lj3g0005764 Lotus japonicus HOM05D003145 ORTHO05D003586 1.3e-11 73.9 184 37.5
arahy.Tifrunner.gnm1.ann1.02BAGQ Arachis hypogaea HOM05D003145 ORTHO05D003586 1.6e-11 73.6 156 41.7
FvH4_7g27230 Fragaria vesca HOM05D003145 ORTHO05D003586 1.6e-11 73.6 94 45.7
PSO541G4354 Papaver somniferum HOM05D003145 ORTHO05D003586 2.1e-11 73.2 174 36.8
Sabra01G0097500 Salix brachista HOM05D003145 ORTHO05D003586 3.7e-11 72.4 107 43.9
Rhsim11G0006900 Rhododendron simsii HOM05D003145 ORTHO05D003586 6.2e-11 71.6 176 39.2
RcHm_v2.0_Chr2g0137831 Rosa chinensis HOM05D003145 ORTHO05D003586 8.1e-11 71.2 158 38.6
Manes.06G040900 Manihot esculenta HOM05D003145 ORTHO05D003586 3.1e-10 69.3 191 37.7
FAN06G4546 Fragaria x ananassa HOM05D003145 ORTHO05D003586 5.3e-10 68.6 160 36.9
FAN01G1165 Fragaria x ananassa HOM05D003145 ORTHO05D003586 6.9e-10 68.2 157 36.9
FAN10G0791 Fragaria x ananassa HOM05D003145 ORTHO05D003586 6.9e-10 68.2 87 42.5
Lalb_Chr01g0000271 Lupinus albus HOM05D003145 ORTHO05D003586 1.5e-09 67.0 210 34.3
PSO170G1839 Papaver somniferum HOM05D003145 ORTHO05D003586 2.0e-09 66.6 179 36.3
Hund03591 Selenicereus undatus HOM05D003145 ORTHO05D003586 7.6e-09 64.7 87 51.7
FAN14G3963 Fragaria x ananassa HOM05D003145 ORTHO05D003586 1.0e-08 64.3 185 37.8
Lj2E223T1 Lonicera japonica HOM05D003145 ORTHO05D003586 1.7e-08 63.5 98 48.0
DCAR_006843 Daucus carota HOM05D003145 ORTHO05D003586 2.9e-08 62.8 168 36.3
PGR042G0077 Punica granatum HOM05D003145 ORTHO05D003586 2.9e-08 62.8 200 35.0
FvH4_6g31120 Fragaria vesca HOM05D003145 ORTHO05D003586 3.8e-08 62.4 185 36.8
Aqoxy7G00827 Aquilegia oxysepala HOM05D003145 ORTHO05D003586 8.4e-08 61.2 186 32.8
CDE04G0452 Ceratophyllum demersum HOM05D003145 ORTHO05D003586 1.4e-07 60.5 165 33.9
ECA238G1652 Erigeron canadensis HOM05D003145 ORTHO05D003586 1.4e-07 60.5 172 41.3
FAN03G1299 Fragaria x ananassa HOM05D003145 ORTHO05D003586 1.4e-07 60.5 187 34.8
Psat3g167200 Pisum sativum HOM05D003145 ORTHO05D003586 2.5e-07 59.7 206 33.5
AUR62016572 Chenopodium quinoa HOM05D003145 ORTHO05D003586 3.2e-07 59.3 174 47.1
Sp6g13500 Schrenkiella parvula HOM05D003145 ORTHO05D003586 4.2e-07 58.9 200 32.5
Hma1.2p1_0316F.1_g122870 Hydrangea macrophylla HOM05D003145 ORTHO05D003586 5.5e-07 58.5 164 35.4
Actinidia02152 Actinidia chinensis HOM05D003145 ORTHO05D003586 9.3e-07 57.8 146 35.6
Aa31LG3G7800 Aethionema arabicum HOM05D003145 ORTHO05D003586 9.3e-07 57.8 142 37.3
ClCG07G016870 Citrullus lanatus HOM05D003145 ORTHO05D003586 9.3e-07 57.8 149 35.6
HPP92_011750 Vanilla planifolia HOM05D003145 ORTHO05D003586 9.3e-07 57.8 200 31.5
VMungo1127G0410 Vigna mungo HOM05D003145 ORTHO05D003586 1.2e-06 57.4 111 46.8
ATR1120G029 Amborella trichopoda HOM05D003145 ORTHO05D003586 2.1e-06 56.6 171 34.5
THA.LOC104808380 Tarenaya hassleriana HOM05D003145 ORTHO05D003586 6.0e-06 55.1 188 30.9


User provided reference genes

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