Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.13515 Avicennia marina HOM05D006955 ORTHO05D008701 7.8e-121 437.2 227 100.0
Migut.L01079 Erythranthe guttata HOM05D006955 ORTHO05D008701 3.8e-99 365.2 227 82.8
SGA_v2.0_scaffold124G33553 Striga asiatica HOM05D006955 ORTHO05D008701 9.3e-98 360.5 227 81.9
SalBow8G1483 Salvia bowleyana HOM05D006955 ORTHO05D008701 1.1e-95 353.6 224 81.2
Oeu033300.1 Olea europaea HOM05D006955 ORTHO05D008701 1.4e-93 346.7 257 73.2
Lj3C1017T15 Lonicera japonica HOM05D006955 ORTHO05D008701 1.3e-91 340.1 224 77.7
CSS0004457 Camellia sinensis var. sinensis HOM05D006955 ORTHO05D008701 8.4e-91 337.4 224 77.2
Dinv21110 Davidia involucrata HOM05D006955 ORTHO05D008701 8.4e-91 337.4 224 77.2
Gorai.013G081500 Gossypium raimondii HOM05D006955 ORTHO05D008701 1.1e-90 337.0 224 77.7
Cc11_g10340 Coffea canephora HOM05D006955 ORTHO05D008701 2.4e-90 335.9 224 77.2
Peaxi162Scf00382g00128 Petunia axillaris HOM05D006955 ORTHO05D008701 3.2e-90 335.5 224 76.8
Actinidia14871 Actinidia chinensis HOM05D006955 ORTHO05D008701 4.2e-90 335.1 224 76.3
Actinidia16638 Actinidia chinensis HOM05D006955 ORTHO05D008701 4.2e-90 335.1 224 76.3
Gohir.D13G071200 Gossypium hirsutum HOM05D006955 ORTHO05D008701 4.2e-90 335.1 224 77.2
Gohir.A13G053700 Gossypium hirsutum HOM05D006955 ORTHO05D008701 9.3e-90 334.0 224 76.8
TWI79G1443 Tripterygium wilfordii HOM05D006955 ORTHO05D008701 1.6e-89 333.2 224 75.4
Potri.008G118800 Populus trichocarpa HOM05D006955 ORTHO05D008701 4.6e-89 331.6 224 75.4
ECA233G4186 Erigeron canadensis HOM05D006955 ORTHO05D008701 1.3e-88 330.1 224 75.4
Aqoxy3G00330 Aquilegia oxysepala HOM05D006955 ORTHO05D008701 2.3e-88 329.3 224 73.2
CANSAT56G1672 Cannabis sativa HOM05D006955 ORTHO05D008701 3.9e-88 328.6 223 75.8
Sp1g11840 Schrenkiella parvula HOM05D006955 ORTHO05D008701 3.9e-88 328.6 224 72.3
Nn3g17799 Nelumbo nucifera HOM05D006955 ORTHO05D008701 5.1e-88 328.2 224 73.7
RcHm_v2.0_Chr4g0435501 Rosa chinensis HOM05D006955 ORTHO05D008701 5.1e-88 328.2 224 74.1
Rhsim12G0082400 Rhododendron simsii HOM05D006955 ORTHO05D008701 6.6e-88 327.8 234 71.8
Manes.14G100100 Manihot esculenta HOM05D006955 ORTHO05D008701 1.1e-87 327.0 214 77.6
Nitab4.5_0004895g0100 Nicotiana tabacum HOM05D006955 ORTHO05D008701 1.5e-87 326.6 224 75.4
Hund25084 Selenicereus undatus HOM05D006955 ORTHO05D008701 1.5e-87 326.6 224 72.8
Haze_17460 Corylus avellana HOM05D006955 ORTHO05D008701 1.9e-87 326.2 224 75.0
AUR62002894 Chenopodium quinoa HOM05D006955 ORTHO05D008701 2.5e-87 325.9 224 71.9
Sc11g0003240 Simmondsia chinensis HOM05D006955 ORTHO05D008701 3.3e-87 325.5 224 73.7
Sc11g0003300 Simmondsia chinensis HOM05D006955 ORTHO05D008701 3.3e-87 325.5 224 73.7
vmacro01371 Vaccinium macrocarpon HOM05D006955 ORTHO05D008701 3.3e-87 325.5 264 66.7
Prupe.1G308500 Prunus persica HOM05D006955 ORTHO05D008701 4.3e-87 325.1 223 73.5
GSVIVG01011919001 Vitis vinifera HOM05D006955 ORTHO05D008701 4.3e-87 325.1 227 74.0
Sabra08G0090200 Salix brachista HOM05D006955 ORTHO05D008701 9.6e-87 323.9 224 72.3
arahy.Tifrunner.gnm1.ann1.0188KY Arachis hypogaea HOM05D006955 ORTHO05D008701 6.2e-86 321.2 224 74.1
arahy.Tifrunner.gnm1.ann1.5TE0FE Arachis hypogaea HOM05D006955 ORTHO05D008701 6.2e-86 321.2 224 74.1
arahy.Tifrunner.gnm1.ann1.FS5FM4 Arachis hypogaea HOM05D006955 ORTHO05D008701 8.1e-86 320.9 224 73.7
Ca_28012_v3 Cicer arietinum L. HOM05D006955 ORTHO05D008701 1.1e-85 320.5 224 72.8
COL.COLO4_07900 Corchorus olitorius HOM05D006955 ORTHO05D008701 1.1e-85 320.5 224 74.1
TPR.G38250 Trifolium pratense HOM05D006955 ORTHO05D008701 3.1e-85 318.9 224 72.8
MELO3C012231.2 Cucumis melo HOM05D006955 ORTHO05D008701 5.3e-85 318.2 224 71.9
PSO017G5158 Papaver somniferum HOM05D006955 ORTHO05D008701 5.3e-85 318.2 224 71.9
Glyma.08G260400 Glycine max HOM05D006955 ORTHO05D008701 1.2e-84 317.0 224 72.3
Phvul.002G082400 Phaseolus vulgaris HOM05D006955 ORTHO05D008701 1.5e-84 316.6 224 71.4
Eucgr.G02335 Eucalyptus grandis HOM05D006955 ORTHO05D008701 2.6e-84 315.8 224 72.3
Psat2g093000 Pisum sativum HOM05D006955 ORTHO05D008701 3.4e-84 315.5 224 71.9
PSO478G1614 Papaver somniferum HOM05D006955 ORTHO05D008701 4.5e-84 315.1 224 71.0
CsaV3_5G034170 Cucumis sativus L. HOM05D006955 ORTHO05D008701 5.8e-84 314.7 224 71.4
Sed0012161 Sechium edule HOM05D006955 ORTHO05D008701 5.8e-84 314.7 224 72.3
THA.LOC104805251 Tarenaya hassleriana HOM05D006955 ORTHO05D008701 5.8e-84 314.7 224 72.3
EL10Ac6g14443 Beta vulgaris HOM05D006955 ORTHO05D008701 1.3e-83 313.5 224 70.1
Ah.02g127040 Amaranthus hybridus HOM05D006955 ORTHO05D008701 3.8e-83 312.0 224 71.4
Medtr5g055150 Medicago truncatula HOM05D006955 ORTHO05D008701 1.1e-82 310.5 224 72.3
PGR119G2132 Punica granatum HOM05D006955 ORTHO05D008701 3.2e-82 308.9 224 71.4
Lalb_Chr17g0342031 Lupinus albus HOM05D006955 ORTHO05D008701 4.2e-82 308.5 224 70.1
Lj2g0004168 Lotus japonicus HOM05D006955 ORTHO05D008701 7.1e-82 307.8 224 71.0
Glyma.01G083100 Glycine max HOM05D006955 ORTHO05D008701 2.7e-81 305.8 225 70.7
VMungo1215G2393 Vigna mungo HOM05D006955 ORTHO05D008701 2.7e-81 305.8 228 69.7
DCAR_023669 Daucus carota HOM05D006955 ORTHO05D008701 4.6e-81 305.1 207 75.4
Lsat_1_v5_gn_8_38900 Lactuca sativa HOM05D006955 ORTHO05D008701 4.6e-81 305.1 207 76.3
FAN07G1824 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.3e-80 303.5 220 69.5
ATR0665G168 Amborella trichopoda HOM05D006955 ORTHO05D008701 1.9e-79 299.7 224 67.9
Thhalv10008697m.g Eutrema salsugineum HOM05D006955 ORTHO05D008701 1.9e-79 299.7 224 67.4
Atru.chr11.1296 Acer truncatum HOM05D006955 ORTHO05D008701 4.3e-79 298.5 224 68.3
FAN22G1329 Fragaria x ananassa HOM05D006955 ORTHO05D008701 9.6e-79 297.4 241 65.6
AL1G25090 Arabidopsis lyrata HOM05D006955 ORTHO05D008701 1.6e-78 296.6 224 67.0
CARHR013710 Cardamine hirsuta HOM05D006955 ORTHO05D008701 4.8e-78 295.0 224 66.1
Cpa.g.sc1.190 Carica papaya HOM05D006955 ORTHO05D008701 1.8e-77 293.1 227 67.8
TAR629G1122 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.8e-77 293.1 249 61.4
HanXRQChr08g0214231 Helianthus annuus HOM05D006955 ORTHO05D008701 3.1e-77 292.4 224 68.8
Thecc.02G357700 Theobroma cacao HOM05D006955 ORTHO05D008701 3.1e-77 292.4 194 79.4
C05p09970 Brassica napus HOM05D006955 ORTHO05D008701 4.0e-77 292.0 224 65.2
QL01p043991 Quercus lobata HOM05D006955 ORTHO05D008701 5.3e-77 291.6 224 70.1
Aa31LG1G1480 Aethionema arabicum HOM05D006955 ORTHO05D008701 9.0e-77 290.8 224 65.6
Ciclev10032679m.g Citrus clementina HOM05D006955 ORTHO05D008701 9.0e-77 290.8 221 68.8
TAR622G0049 Trochodendron aralioides HOM05D006955 ORTHO05D008701 1.5e-76 290.0 224 65.2
AT1G13330 Arabidopsis thaliana HOM05D006955 ORTHO05D008701 2.6e-76 289.3 224 65.2
A06p08430 Brassica napus HOM05D006955 ORTHO05D008701 5.8e-76 288.1 224 64.7
BraA06t24039Z Brassica rapa HOM05D006955 ORTHO05D008701 5.8e-76 288.1 224 64.7
Duzib251G0691 Durio zibethinus HOM05D006955 ORTHO05D008701 5.8e-76 288.1 224 69.2
Nitab4.5_0003823g0050 Nicotiana tabacum HOM05D006955 ORTHO05D008701 7.6e-76 287.7 202 73.8
BcaC05g25057 Brassica carinata HOM05D006955 ORTHO05D008701 2.9e-75 285.8 224 64.3
BcaC05g25064 Brassica carinata HOM05D006955 ORTHO05D008701 2.9e-75 285.8 224 64.3
BolC5t29739H Brassica oleracea HOM05D006955 ORTHO05D008701 2.9e-75 285.8 224 64.3
FAN12G2251 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.4e-74 283.5 220 65.9
FAN12G1265 Fragaria x ananassa HOM05D006955 ORTHO05D008701 1.9e-74 283.1 233 64.4
BolC5t29750H Brassica oleracea HOM05D006955 ORTHO05D008701 3.2e-74 282.3 207 66.7
AUR62035251 Chenopodium quinoa HOM05D006955 ORTHO05D008701 9.3e-74 280.8 224 65.2
MD16G1044800 Malus domestica HOM05D006955 ORTHO05D008701 4.6e-73 278.5 224 64.3
MD13G1044000 Malus domestica HOM05D006955 ORTHO05D008701 1.3e-72 276.9 224 63.8
HPP92_011092 Vanilla planifolia HOM05D006955 ORTHO05D008701 2.5e-71 272.7 214 65.0
ClCG05G022860 Citrullus lanatus HOM05D006955 ORTHO05D008701 2.8e-70 269.2 239 63.2
Carub.0001s1306 Capsella rubella HOM05D006955 ORTHO05D008701 1.1e-69 267.3 224 61.2
CiPaw.15G005500 Carya illinoinensis HOM05D006955 ORTHO05D008701 2.4e-69 266.2 195 72.8
HPP92_011108 Vanilla planifolia HOM05D006955 ORTHO05D008701 2.4e-69 266.2 210 64.3
SHI33974 Sapria himalayana HOM05D006955 ORTHO05D008701 1.2e-68 263.8 207 65.7
Solyc05g009560.4 Solanum lycopersicum HOM05D006955 ORTHO05D008701 1.0e-64 250.8 222 60.8
Sopen05g005370 Solanum pennellii HOM05D006955 ORTHO05D008701 1.0e-64 250.8 222 60.8
Zm00001eb216450 Zea mays HOM05D006955 ORTHO05D008701 6.7e-64 248.1 224 58.5
CAN.G656.28 Capsicum annuum HOM05D006955 ORTHO05D008701 8.7e-64 247.7 222 59.9
Mapoly0015s0151 Marchantia polymorpha HOM05D006955 ORTHO05D008701 4.8e-62 241.9 221 53.8
CDE05G2755 Ceratophyllum demersum HOM05D006955 ORTHO05D008701 1.0e-59 234.2 223 56.1
SEGI_38068 Sequoiadendron giganteum HOM05D006955 ORTHO05D008701 1.9e-58 229.9 193 61.7
SMO203G0092 Selaginella moellendorffii HOM05D006955 ORTHO05D008701 4.6e-57 225.3 207 55.6
CBR_g3130 Chara braunii HOM05D006955 ORTHO05D008701 2.0e-52 209.9 213 51.6
PGSC0003DMG402012965 Solanum tuberosum HOM05D006955 ORTHO05D008701 3.3e-47 192.6 139 68.3
CAN.G706.23 Capsicum annuum HOM05D006955 ORTHO05D008701 2.2e-46 189.9 184 58.7
Pp3c23_21510 Physcomitrium patens HOM05D006955 ORTHO05D008701 7.5e-39 164.9 188 44.7
CAN.G884.17 Capsicum annuum HOM05D000526 ORTHO05D000956 1.0e-35 154.5 210 47.1
unitig_27.g25247 Utricularia gibba HOM05D006955 ORTHO05D008701 8.5e-35 151.4 97 72.2
Potri.010G127101 Populus trichocarpa HOM05D006955 ORTHO05D008701 1.2e-28 131.0 163 50.3
unitig_27.g25246 Utricularia gibba HOM05D002984 ORTHO05D003561 1.0e-27 127.9 99 70.7
Cre06.g284400 Chlamydomonas reinhardtii HOM05D006955 ORTHO05D008701 6.6e-19 98.6 220 30.0
MCO07G460 Micromonas commoda HOM05D006955 ORTHO05D008701 8.6e-19 98.2 194 31.4
PRCOL_00000208 Prasinoderma coloniale HOM05D006955 ORTHO05D008701 9.2e-13 78.2 213 28.2
Medtr5g055130 Medicago truncatula HOM05D002518 ORTHO05D002630 2.3e-08 63.5 106 45.3
Medtr4g007850 Medicago truncatula HOM05D003710 ORTHO05D258575 1.5e-07 60.8 95 44.2
C05p10030 Brassica napus HOM05D006955 ORTHO05D008701 8.3e-06 55.1 32 75.0


User provided reference genes

Program Settings