Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 6.4e-222 773.9 394 100.0
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 8.5e-174 614.0 338 91.1
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 3.1e-168 595.5 340 87.4
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 7.9e-164 580.9 338 84.9
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 4.0e-155 552.0 338 82.5
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 5.2e-155 551.6 338 82.0
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 5.2e-155 551.6 338 81.7
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 2.6e-154 549.3 334 81.7
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 5.7e-154 548.1 338 82.0
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 7.5e-154 547.7 338 82.0
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-153 546.6 341 81.2
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-153 546.6 341 81.2
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 2.2e-153 546.2 340 80.9
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 6.3e-153 544.7 341 80.4
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 1.1e-152 543.9 377 74.5
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 1.4e-152 543.5 338 80.2
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 1.8e-152 543.1 316 85.4
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 3.1e-152 542.3 331 82.5
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 1.6e-151 540.0 338 79.6
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 7.7e-151 537.7 342 78.7
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.3e-150 537.0 340 78.8
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 1.3e-150 537.0 359 75.2
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 1.7e-150 536.6 340 79.1
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 1.1e-149 533.9 340 80.3
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 1.5e-149 533.5 338 78.7
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.9e-149 533.1 338 78.7
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 4.2e-149 531.9 339 80.2
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 4.2e-149 531.9 340 77.6
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.5e-149 531.6 338 78.4
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 5.5e-149 531.6 336 78.3
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 7.2e-149 531.2 340 78.8
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 9.4e-149 530.8 340 78.8
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 9.4e-149 530.8 330 81.5
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.6e-148 530.0 320 81.6
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 3.6e-148 528.9 338 80.2
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 1.8e-147 526.6 355 76.1
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 1.8e-147 526.6 320 80.9
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.8e-147 526.6 320 80.9
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.3e-147 526.2 338 77.5
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 4.0e-147 525.4 319 81.5
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.5e-146 523.5 320 80.3
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 2.6e-146 522.7 338 77.2
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 3.4e-146 522.3 344 75.9
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 4.4e-146 521.9 317 79.8
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 4.4e-146 521.9 318 80.2
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 5.7e-146 521.5 341 79.5
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 7.5e-146 521.2 355 75.2
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 7.5e-146 521.2 340 76.5
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 9.8e-146 520.8 338 75.7
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 1.3e-145 520.4 340 76.8
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.3e-145 520.4 338 76.0
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.7e-145 520.0 355 75.2
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.2e-145 519.6 334 76.9
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 2.8e-145 519.2 337 78.6
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.7e-145 518.8 337 78.3
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 8.3e-145 517.7 338 77.5
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 8.3e-145 517.7 332 77.4
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 8.3e-145 517.7 337 78.3
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 8.3e-145 517.7 331 77.9
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 1.8e-144 516.5 338 76.6
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 3.1e-144 515.8 331 77.6
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 4.1e-144 515.4 343 77.3
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 7.0e-144 514.6 311 82.0
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 9.1e-144 514.2 352 74.4
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.6e-143 513.5 293 87.0
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.6e-143 513.5 293 87.0
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 7.7e-143 511.1 340 75.0
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 2.9e-142 509.2 331 76.7
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 2.9e-142 509.2 331 76.7
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 5.0e-142 508.4 331 76.4
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 8.5e-142 507.7 338 75.7
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 1.5e-141 506.9 319 79.6
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 1.5e-141 506.9 339 77.0
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 1.5e-141 506.9 319 78.7
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 1.9e-141 506.5 331 76.1
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 3.2e-141 505.8 330 76.7
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 4.2e-141 505.4 337 77.4
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.2e-140 503.8 338 74.3
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 1.2e-140 503.8 323 78.3
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 1.6e-140 503.4 338 75.1
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 2.1e-140 503.1 338 74.0
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 3.6e-140 502.3 366 71.3
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 6.1e-140 501.5 319 78.7
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 8.0e-140 501.1 341 73.9
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 1.8e-139 500.0 339 72.9
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 2.3e-139 499.6 334 74.9
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 5.2e-139 498.4 338 74.0
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.5e-138 496.9 338 75.1
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 2.6e-138 496.1 334 74.0
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 2.2e-137 493.0 338 74.0
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 4.9e-137 491.9 339 72.3
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 4.9e-137 491.9 330 75.2
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 4.9e-137 491.9 339 72.0
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 6.3e-137 491.5 339 73.2
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 1.6e-135 486.9 341 71.0
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 1.6e-135 486.9 341 71.0
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 3.5e-135 485.7 344 70.6
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 4.5e-135 485.3 316 74.4
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 4.5e-135 485.3 316 74.4
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 4.5e-135 485.3 316 74.4
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 5.9e-135 485.0 316 74.7
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 5.9e-135 485.0 316 74.7
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 5.9e-135 485.0 316 74.7
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 5.9e-135 485.0 316 74.4
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 7.7e-135 484.6 316 74.7
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 1.0e-134 484.2 339 71.4
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 1.0e-134 484.2 344 70.6
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 1.0e-134 484.2 341 70.7
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.3e-134 483.0 339 74.6
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 2.9e-134 482.6 339 71.4
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 5.0e-134 481.9 359 69.6
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 5.0e-134 481.9 316 74.1
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 3.3e-133 479.2 303 78.5
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 4.3e-133 478.8 316 74.1
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 4.3e-133 478.8 338 73.1
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 3.0e-131 472.6 338 69.2
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 3.4e-130 469.2 335 71.0
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 2.4e-128 463.0 379 64.9
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 2.0e-127 459.9 338 70.7
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 4.6e-127 458.8 339 69.3
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.6e-124 450.3 339 71.7
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 1.6e-124 450.3 344 65.1
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 6.2e-124 448.4 338 69.5
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 2.3e-123 446.4 338 68.6
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 1.5e-122 443.7 342 66.4
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 5.8e-122 441.8 341 66.9
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 2.9e-121 439.5 344 65.7
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 4.9e-121 438.7 307 69.1
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 6.4e-121 438.3 343 66.5
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 6.4e-121 438.3 343 66.5
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 7.8e-119 431.4 339 64.3
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.3e-118 430.6 325 65.8
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 1.3e-113 414.1 307 65.1
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 6.4e-113 411.8 275 75.3
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 9.5e-109 397.9 311 61.7
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 1.2e-108 397.5 319 62.1
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 8.1e-108 394.8 318 62.6
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 1.5e-98 364.0 224 79.0
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.1e-93 347.8 243 72.4
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 2.5e-93 346.7 258 68.2
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 5.6e-85 318.9 202 76.2
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 4.5e-82 309.3 291 56.0
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 6.4e-81 305.4 248 64.9
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 2.1e-79 300.4 205 74.1
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 8.2e-68 261.9 177 76.8
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.2e-66 258.1 186 65.6
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.2e-66 258.1 186 65.6
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 6.7e-54 215.7 137 77.4
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.0e-53 214.2 156 64.7
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 1.3e-52 211.5 115 88.7
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 4.5e-50 203.0 124 77.4
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 2.5e-48 197.2 116 78.4
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 3.2e-40 170.2 158 58.9
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.6e-39 166.8 127 63.8
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 4.7e-39 166.4 158 57.6
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 4.0e-38 163.3 158 57.0
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 2.1e-31 141.0 118 66.9
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 2.0e-26 124.4 164 45.1
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 5.0e-25 119.8 92 68.5
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 2.1e-23 114.4 67 82.1
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 2.1e-23 114.4 85 69.4
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 3.1e-19 100.5 124 46.8
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 4.5e-18 96.7 71 67.6
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.3e-17 94.4 118 45.8
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 1.8e-14 84.7 78 55.1
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.5e-13 81.6 145 40.7
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 1.9e-08 64.7 40 75.0
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 1.6e-07 61.6 51 62.7


User provided reference genes

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