Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10986 Avicennia marina HOM05D006300 ORTHO05D007623 6.3e-150 534.3 307 100.0
Migut.I01022 Erythranthe guttata HOM05D006300 ORTHO05D007623 4.9e-86 322.0 307 65.5
SalBow6G0902 Salvia bowleyana HOM05D006300 ORTHO05D007623 1.5e-82 310.5 300 67.7
Solyc03g121560.3 Solanum lycopersicum HOM05D006300 ORTHO05D007623 4.6e-76 288.9 319 59.9
Actinidia21757 Actinidia chinensis HOM05D006300 ORTHO05D007623 6.0e-76 288.5 267 66.7
Dinv30382 Davidia involucrata HOM05D006300 ORTHO05D007623 1.8e-75 287.0 328 57.3
Sopen03g040370 Solanum pennellii HOM05D006300 ORTHO05D007623 2.3e-75 286.6 319 58.9
SGA_v2.0_scaffold127G34049 Striga asiatica HOM05D006300 ORTHO05D007623 8.7e-75 284.6 313 60.4
CAN.G1389.16 Capsicum annuum HOM05D006300 ORTHO05D007623 3.3e-74 282.7 247 68.0
GSVIVG01016850001 Vitis vinifera HOM05D006300 ORTHO05D007623 5.7e-74 282.0 257 65.4
Duzib192G0510 Durio zibethinus HOM05D006300 ORTHO05D007623 1.9e-69 266.9 311 55.6
Rhsim08G0233100 Rhododendron simsii HOM05D006300 ORTHO05D007623 1.9e-69 266.9 247 66.4
Manes.11G026800 Manihot esculenta HOM05D006300 ORTHO05D007623 2.1e-68 263.5 317 54.6
Gohir.D10G061000 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.3e-67 260.8 313 54.3
Gorai.003G059300 Gossypium raimondii HOM05D006300 ORTHO05D007623 3.9e-67 259.2 328 52.4
QL05p012743 Quercus lobata HOM05D006300 ORTHO05D007623 8.7e-67 258.1 326 51.2
vmacro18787 Vaccinium macrocarpon HOM05D006300 ORTHO05D007623 8.7e-67 258.1 309 57.0
Thecc.06G111200 Theobroma cacao HOM05D006300 ORTHO05D007623 1.1e-66 257.7 176 75.6
CANSAT56G1450 Cannabis sativa HOM05D006300 ORTHO05D007623 3.3e-66 256.1 261 61.7
Dinv37916 Davidia involucrata HOM05D006300 ORTHO05D007623 3.3e-66 256.1 311 56.9
Potri.003G038600 Populus trichocarpa HOM05D006300 ORTHO05D007623 3.3e-66 256.1 185 72.4
COL.COLO4_30656 Corchorus olitorius HOM05D006300 ORTHO05D007623 9.7e-66 254.6 314 54.5
Gohir.D03G056300 Gossypium hirsutum HOM05D006300 ORTHO05D007623 9.7e-66 254.6 328 51.8
Gohir.A10G059500 Gossypium hirsutum HOM05D006300 ORTHO05D007623 1.3e-65 254.2 186 71.0
Nitab4.5_0001295g0030 Nicotiana tabacum HOM05D006300 ORTHO05D007623 2.8e-65 253.1 280 59.3
Prupe.3G050100 Prunus persica HOM05D006300 ORTHO05D007623 2.8e-65 253.1 262 58.4
Duzib160G0060 Durio zibethinus HOM05D006300 ORTHO05D007623 1.1e-64 251.1 309 54.0
HanXRQChr09g0276431 Helianthus annuus HOM05D006300 ORTHO05D007623 1.4e-64 250.8 181 72.9
Manes.04G139300 Manihot esculenta HOM05D006300 ORTHO05D007623 2.4e-64 250.0 272 58.8
Lsat_1_v5_gn_4_95241 Lactuca sativa HOM05D006300 ORTHO05D007623 3.1e-64 249.6 173 75.1
Gohir.A02G115200 Gossypium hirsutum HOM05D006300 ORTHO05D007623 4.1e-64 249.2 328 51.2
Gorai.011G065200 Gossypium raimondii HOM05D006300 ORTHO05D007623 4.1e-64 249.2 301 54.2
PGR102G2043 Punica granatum HOM05D006300 ORTHO05D007623 1.5e-63 247.3 178 71.3
Ah.15g094170 Amaranthus hybridus HOM05D006300 ORTHO05D007623 2.6e-63 246.5 304 49.3
Duzib235G0903 Durio zibethinus HOM05D006300 ORTHO05D007623 2.6e-63 246.5 176 71.6
BcaC05g25688 Brassica carinata HOM05D006300 ORTHO05D007623 5.9e-63 245.4 177 70.1
C05p16080 Brassica napus HOM05D006300 ORTHO05D007623 5.9e-63 245.4 177 70.1
BolC5t30308H Brassica oleracea HOM05D006300 ORTHO05D007623 5.9e-63 245.4 177 70.1
AT1G17665 Arabidopsis thaliana HOM05D006300 ORTHO05D007623 1.7e-62 243.8 177 69.5
Peaxi162Scf00038g01529 Petunia axillaris HOM05D006300 ORTHO05D007623 1.7e-62 243.8 226 62.4
TAR636G0696 Trochodendron aralioides HOM05D006300 ORTHO05D007623 2.2e-62 243.4 180 71.7
CiPaw.01G225300 Carya illinoinensis HOM05D006300 ORTHO05D007623 2.9e-62 243.0 254 56.3
BcaB07g34023 Brassica carinata HOM05D006300 ORTHO05D007623 5.0e-62 242.3 174 70.7
Nitab4.5_0007429g0010 Nicotiana tabacum HOM05D006300 ORTHO05D007623 1.1e-61 241.1 265 59.6
AL1G29990 Arabidopsis lyrata HOM05D006300 ORTHO05D007623 1.4e-61 240.7 177 68.4
MD17G1174400 Malus domestica HOM05D006300 ORTHO05D007623 2.5e-61 240.0 267 58.1
TAR624G0799 Trochodendron aralioides HOM05D006300 ORTHO05D007623 4.2e-61 239.2 180 70.6
Carub.0001s1740 Capsella rubella HOM05D006300 ORTHO05D007623 9.4e-61 238.0 173 69.9
CARHR018270 Cardamine hirsuta HOM05D006300 ORTHO05D007623 9.4e-61 238.0 173 69.9
CsaV3_7G034830 Cucumis sativus L. HOM05D006300 ORTHO05D007623 9.4e-61 238.0 324 49.1
Nn6g35476 Nelumbo nucifera HOM05D006300 ORTHO05D007623 2.1e-60 236.9 340 47.9
Thhalv10008108m.g Eutrema salsugineum HOM05D006300 ORTHO05D007623 2.7e-60 236.5 175 69.1
MELO3C024394.2 Cucumis melo HOM05D006300 ORTHO05D007623 6.1e-60 235.3 264 55.7
Sp1g15770 Schrenkiella parvula HOM05D006300 ORTHO05D007623 6.1e-60 235.3 173 68.2
Medtr2g100100 Medicago truncatula HOM05D006300 ORTHO05D007623 5.1e-59 232.3 248 58.9
TAR383G0464 Trochodendron aralioides HOM05D006300 ORTHO05D007623 5.1e-59 232.3 180 68.3
PGR102G2710 Punica granatum HOM05D006300 ORTHO05D007623 6.7e-59 231.9 315 48.6
arahy.Tifrunner.gnm1.ann1.F4I7X2 Arachis hypogaea HOM05D006300 ORTHO05D007623 2.0e-58 230.3 307 50.2
Sabra03G0025100 Salix brachista HOM05D006300 ORTHO05D007623 3.3e-58 229.6 213 61.0
arahy.Tifrunner.gnm1.ann1.X9C73S Arachis hypogaea HOM05D006300 ORTHO05D007623 4.4e-58 229.2 307 50.2
CiPaw.02G140400 Carya illinoinensis HOM05D006300 ORTHO05D007623 9.7e-58 228.0 265 51.3
THA.LOC104812213 Tarenaya hassleriana HOM05D006300 ORTHO05D007623 9.7e-58 228.0 319 47.3
Hund20857 Selenicereus undatus HOM05D006300 ORTHO05D007623 2.2e-57 226.9 215 59.1
Cc04_g01980 Coffea canephora HOM05D006300 ORTHO05D007623 3.7e-57 226.1 330 48.5
Nn8g38867 Nelumbo nucifera HOM05D006300 ORTHO05D007623 6.3e-57 225.3 350 46.9
BraA06t24508Z Brassica rapa HOM05D006300 ORTHO05D007623 1.4e-56 224.2 164 69.5
MBI04_g34125_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 6.9e-56 221.9 172 69.2
ECA232G1041 Erigeron canadensis HOM05D000140 ORTHO05D000087 1.5e-55 220.7 171 69.6
DCAR_007620 Daucus carota HOM05D006300 ORTHO05D007623 2.6e-55 219.9 217 57.1
RcHm_v2.0_Chr2g0142971 Rosa chinensis HOM05D006300 ORTHO05D007623 2.6e-55 219.9 176 64.8
Lalb_Chr24g0396361 Lupinus albus HOM05D006300 ORTHO05D007623 5.9e-55 218.8 309 45.6
MBI01_g01269_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 5.9e-55 218.8 174 66.7
A06p13560 Brassica napus HOM05D006300 ORTHO05D007623 1.0e-54 218.0 291 50.9
Aa31LG7G2500 Aethionema arabicum HOM05D006300 ORTHO05D007623 3.8e-54 216.1 171 66.7
PSO210G2046 Papaver somniferum HOM05D006300 ORTHO05D007623 5.0e-54 215.7 175 66.3
PSO210G0359 Papaver somniferum HOM05D006300 ORTHO05D007623 1.1e-53 214.5 175 65.7
Aqoxy7G01215 Aquilegia oxysepala HOM05D006300 ORTHO05D007623 1.4e-53 214.2 185 63.8
Glyma.13G350600 Glycine max HOM05D006300 ORTHO05D007623 1.9e-53 213.8 173 67.1
FvH4_6g33270 Fragaria vesca HOM05D006300 ORTHO05D007623 3.2e-53 213.0 176 64.8
FAN14G0371 Fragaria x ananassa HOM05D006300 ORTHO05D007623 3.2e-53 213.0 176 64.8
AUR62038132 Chenopodium quinoa HOM05D000073 ORTHO05D000033 4.2e-53 212.6 161 69.6
Glyma.15G023900 Glycine max HOM05D006300 ORTHO05D007623 7.2e-53 211.8 173 65.9
Haze_15947 Corylus avellana HOM05D006300 ORTHO05D007623 2.1e-52 210.3 350 47.4
Phvul.005G159900 Phaseolus vulgaris HOM05D006300 ORTHO05D007623 2.1e-52 210.3 173 65.9
CDE06G2767 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 2.0e-50 203.8 179 63.7
Lj3g0013508 Lotus japonicus HOM05D006300 ORTHO05D007623 3.3e-50 203.0 161 67.1
CDE04G2687 Ceratophyllum demersum HOM05D006300 ORTHO05D007623 4.4e-50 202.6 179 64.2
Ciclev10025783m.g Citrus clementina HOM05D006300 ORTHO05D007623 5.7e-50 202.2 173 62.4
FAN05G1138 Fragaria x ananassa HOM05D006300 ORTHO05D007623 1.1e-48 198.0 164 64.0
Atru.chr1.3720 Acer truncatum HOM05D001008 ORTHO05D003146 1.4e-48 197.6 295 49.8
FAN02G1261 Fragaria x ananassa HOM05D006300 ORTHO05D007623 2.4e-48 196.8 174 62.1
Psat4g199680 Pisum sativum HOM05D006300 ORTHO05D007623 1.6e-47 194.1 162 63.6
TPR.G6530 Trifolium pratense HOM05D006300 ORTHO05D007623 1.6e-47 194.1 163 65.0
VMungo1080G1020 Vigna mungo HOM05D006300 ORTHO05D007623 2.6e-47 193.4 203 56.2
Medtr8g016260 Medicago truncatula HOM05D006300 ORTHO05D007623 3.8e-46 189.5 179 57.0
ClCG09G000650 Citrullus lanatus HOM05D006300 ORTHO05D007623 5.5e-45 185.7 272 45.6
PGSC0003DMG400002589 Solanum tuberosum HOM05D006300 ORTHO05D007623 2.1e-44 183.7 247 54.3
ATR0026G017 Amborella trichopoda HOM05D006300 ORTHO05D007623 1.5e-42 177.6 189 54.0
Ca_28052_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 4.4e-42 176.0 130 69.2
Ca_30533_v3 Cicer arietinum L. HOM05D006300 ORTHO05D007623 4.4e-42 176.0 130 69.2
AagrBONN_evm.TU.Sc2ySwM_228.500 Anthoceros agrestis HOM05D006300 ORTHO05D007623 7.5e-42 175.3 162 59.9
Mapoly0001s0383 Marchantia polymorpha HOM05D006300 ORTHO05D007623 1.7e-41 174.1 167 57.5
Pp3c7_7340 Physcomitrium patens HOM05D006300 ORTHO05D007623 2.0e-39 167.2 167 56.9
FAN09G0301 Fragaria x ananassa HOM05D006300 ORTHO05D007623 7.7e-39 165.2 176 55.7
Cpa.g.sc25.55 Carica papaya HOM05D006300 ORTHO05D007623 3.8e-38 162.9 97 81.4
Oeu039964.1 Olea europaea HOM05D006300 ORTHO05D007623 1.9e-37 160.6 124 67.7
TPR.G7922 Trifolium pratense HOM05D006300 ORTHO05D007623 5.9e-31 139.0 116 62.1
HPP92_003967 Vanilla planifolia HOM05D006300 ORTHO05D007623 2.2e-30 137.1 124 63.7
Zm00001eb337890 Zea mays HOM05D006300 ORTHO05D007623 2.8e-25 120.2 179 41.3
Os01g0197400 Oryza sativa ssp. japonica HOM05D006300 ORTHO05D007623 5.4e-24 115.9 177 41.2
CSS0024626 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 2.7e-23 113.6 64 85.9
arahy.Tifrunner.gnm1.ann1.046NH9 Arachis hypogaea HOM05D006300 ORTHO05D007623 6.1e-20 102.4 108 54.6
Lj9P518T56 Lonicera japonica HOM05D006300 ORTHO05D007623 5.7e-18 95.9 171 45.0
Sc15g0000130 Simmondsia chinensis HOM05D006300 ORTHO05D007623 1.4e-16 91.3 120 53.3
COL.COLO4_30657 Corchorus olitorius HOM05D001008 ORTHO05D007623 2.4e-16 90.5 71 64.8
arahy.Tifrunner.gnm1.ann1.Z85M5C Arachis hypogaea HOM05D006300 ORTHO05D007623 7.8e-15 85.5 112 45.5
Cpa.g.sc25.56 Carica papaya HOM05D006300 ORTHO05D007623 7.8e-15 85.5 169 37.3
Sed0006903 Sechium edule HOM05D006300 ORTHO05D007623 1.5e-13 81.3 194 39.2
CSS0019345 Camellia sinensis var. sinensis HOM05D006300 ORTHO05D007623 9.5e-13 78.6 191 44.5
Oeu007005.1 Olea europaea HOM05D006300 ORTHO05D007623 3.6e-12 76.6 198 35.9
arahy.Tifrunner.gnm1.ann1.RJ4DBV Arachis hypogaea HOM05D006300 ORTHO05D007623 3.1e-11 73.6 72 56.9
MBI06_g20962_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 9.8e-10 68.6 40 80.0
MBI07_g16251_MAGBIO Magnolia biondii HOM05D001001 ORTHO05D000808 2.9e-09 67.0 97 42.3
MBI09_g03017_MAGBIO Magnolia biondii HOM05D006300 ORTHO05D007623 2.9e-09 67.0 39 79.5


User provided reference genes

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