Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10442 Avicennia marina HOM05D003999 ORTHO05D005219 4.0e-68 261.2 120 100.0
MSTRG.26544 Avicennia marina HOM05D003999 ORTHO05D005219 2.5e-49 198.7 124 72.6
Migut.L01882 Erythranthe guttata HOM05D003999 ORTHO05D005219 1.2e-48 196.4 124 71.8
Dinv41175 Davidia involucrata HOM05D003999 ORTHO05D005219 2.0e-46 189.1 120 73.3
vmacro05997 Vaccinium macrocarpon HOM05D003999 ORTHO05D005219 1.1e-44 183.3 123 69.1
Hma1.2p1_1326F.1_g275830 Hydrangea macrophylla HOM05D003999 ORTHO05D005219 4.1e-44 181.4 123 67.5
Rhsim03G0266100 Rhododendron simsii HOM05D003999 ORTHO05D005219 4.1e-44 181.4 114 71.9
Peaxi162Scf00670g00347 Petunia axillaris HOM05D003999 ORTHO05D005219 2.2e-42 175.6 117 68.4
Cc06_g20850 Coffea canephora HOM05D003999 ORTHO05D005219 6.5e-42 174.1 120 67.5
Cfa013453 Carpinus fangiana HOM05D003999 ORTHO05D005219 1.4e-41 172.9 123 64.2
CiPaw.07G197100 Carya illinoinensis HOM05D003999 ORTHO05D005219 4.2e-41 171.4 123 63.4
CAN.G79.26 Capsicum annuum HOM05D003999 ORTHO05D005219 7.2e-41 170.6 118 66.1
SGA_v2.0_scaffold231G43410 Striga asiatica HOM05D003999 ORTHO05D005219 9.4e-41 170.2 101 72.3
SalBow5G4070 Salvia bowleyana HOM05D003999 ORTHO05D005219 1.2e-40 169.9 119 65.5
GSVIVG01010859001 Vitis vinifera HOM05D003999 ORTHO05D005219 1.6e-40 169.5 124 63.7
Sed0001699 Sechium edule HOM05D003999 ORTHO05D005219 1.4e-39 166.4 121 63.6
Migut.J00798 Erythranthe guttata HOM05D003999 ORTHO05D005219 5.1e-39 164.5 102 73.5
AUR62027455 Chenopodium quinoa HOM05D003999 ORTHO05D005219 6.7e-39 164.1 118 62.7
Prupe.1G075400 Prunus persica HOM05D003999 ORTHO05D005219 6.7e-39 164.1 123 61.8
DCAR_014666 Daucus carota HOM05D003999 ORTHO05D005219 8.8e-39 163.7 106 66.0
Atru.chr7.755 Acer truncatum HOM05D003999 ORTHO05D005219 1.1e-38 163.3 110 67.3
Atru.chr7.776 Acer truncatum HOM05D003999 ORTHO05D005219 1.1e-38 163.3 110 67.3
ClCG06G013610 Citrullus lanatus HOM05D003999 ORTHO05D005219 1.1e-38 163.3 112 67.0
Sc08g0004740 Simmondsia chinensis HOM05D003999 ORTHO05D005219 1.5e-38 162.9 117 61.5
Duzib114G0910 Durio zibethinus HOM05D003999 ORTHO05D005219 2.0e-38 162.5 121 62.8
Manes.06G019800 Manihot esculenta HOM05D003999 ORTHO05D005219 2.0e-38 162.5 111 64.9
COL.COLO4_08503 Corchorus olitorius HOM05D003999 ORTHO05D005219 2.6e-38 162.2 121 63.6
unitig_8.g4939 Utricularia gibba HOM05D003999 ORTHO05D005219 3.3e-38 161.8 111 62.2
Actinidia38494 Actinidia chinensis HOM05D003999 ORTHO05D005219 4.4e-38 161.4 128 60.9
AUR62031249 Chenopodium quinoa HOM05D003999 ORTHO05D005219 4.4e-38 161.4 118 61.0
Sopen02g019140 Solanum pennellii HOM05D003999 ORTHO05D005219 4.4e-38 161.4 98 71.4
Ciclev10010423m.g Citrus clementina HOM05D003999 ORTHO05D005219 5.7e-38 161.0 119 62.2
Duzib106G1697 Durio zibethinus HOM05D003999 ORTHO05D005219 5.7e-38 161.0 121 62.0
Thecc.10G174600 Theobroma cacao HOM05D003999 ORTHO05D005219 5.7e-38 161.0 115 66.1
EL10Ac8g19270 Beta vulgaris HOM05D003999 ORTHO05D005219 9.7e-38 160.2 120 58.3
Potri.018G142300 Populus trichocarpa HOM05D003999 ORTHO05D005219 9.7e-38 160.2 116 62.9
Hund06701 Selenicereus undatus HOM05D003999 ORTHO05D005219 1.3e-37 159.8 121 59.5
Actinidia29951 Actinidia chinensis HOM05D003999 ORTHO05D005219 1.7e-37 159.5 151 53.6
Gohir.D06G185700 Gossypium hirsutum HOM05D003999 ORTHO05D005219 1.7e-37 159.5 117 65.0
Gorai.010G217300 Gossypium raimondii HOM05D003999 ORTHO05D005219 1.7e-37 159.5 117 65.0
MD13G1241700 Malus domestica HOM05D003999 ORTHO05D005219 1.7e-37 159.5 121 61.2
Sabra18G0116200 Salix brachista HOM05D003999 ORTHO05D005219 3.7e-37 158.3 100 71.0
Sed0015737 Sechium edule HOM05D003999 ORTHO05D005219 6.3e-37 157.5 117 62.4
Gohir.A06G176100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 8.2e-37 157.1 117 64.1
HanXRQChr09g0244721 Helianthus annuus HOM05D003999 ORTHO05D005219 8.2e-37 157.1 109 67.9
Lj1g0014223 Lotus japonicus HOM05D003999 ORTHO05D005219 1.1e-36 156.8 107 64.5
Phvul.009G117100 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 3.1e-36 155.2 112 59.8
CiPaw.08G032500 Carya illinoinensis HOM05D003999 ORTHO05D005219 5.3e-36 154.5 120 60.0
Ca_15280_v3 Cicer arietinum L. HOM05D003999 ORTHO05D005219 9.1e-36 153.7 111 62.2
Glyma.04G001900 Glycine max HOM05D003999 ORTHO05D005219 2.0e-35 152.5 122 56.6
MD16G1248600 Malus domestica HOM05D003999 ORTHO05D005219 2.0e-35 152.5 120 57.5
Medtr3g100350 Medicago truncatula HOM05D003999 ORTHO05D005219 2.0e-35 152.5 112 61.6
TPR.G6349 Trifolium pratense HOM05D003999 ORTHO05D005219 2.0e-35 152.5 121 58.7
ECA240G0372 Erigeron canadensis HOM05D003999 ORTHO05D005219 7.7e-35 150.6 111 62.2
arahy.Tifrunner.gnm1.ann1.K74ZDU Arachis hypogaea HOM05D003999 ORTHO05D005219 1.0e-34 150.2 123 56.1
Glyma.06G001400 Glycine max HOM05D003999 ORTHO05D005219 1.0e-34 150.2 122 54.9
TWI63G1413 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 3.8e-34 148.3 107 63.6
THA.LOC104814650 Tarenaya hassleriana HOM05D003999 ORTHO05D005219 5.0e-34 147.9 110 61.8
Potri.006G075400 Populus trichocarpa HOM05D003999 ORTHO05D005219 6.5e-34 147.5 116 60.3
TWI34G1954 Tripterygium wilfordii HOM05D003999 ORTHO05D005219 6.5e-34 147.5 96 68.8
VMungo1309G0585 Vigna mungo HOM05D003999 ORTHO05D005219 8.5e-34 147.1 111 56.8
RcHm_v2.0_Chr7g0219501 Rosa chinensis HOM05D003999 ORTHO05D005219 1.4e-33 146.4 123 54.5
DCAR_020148 Daucus carota HOM05D003999 ORTHO05D005219 2.5e-33 145.6 107 65.4
Gohir.D10G188000 Gossypium hirsutum HOM05D003999 ORTHO05D005219 3.2e-33 145.2 115 59.1
Gohir.A10G181100 Gossypium hirsutum HOM05D003999 ORTHO05D005219 9.4e-33 143.7 121 56.2
Psat5g048320 Pisum sativum HOM05D003999 ORTHO05D005219 9.4e-33 143.7 119 56.3
arahy.Tifrunner.gnm1.ann1.M9AABA Arachis hypogaea HOM05D003999 ORTHO05D005219 1.6e-32 142.9 97 63.9
Nn8g40781 Nelumbo nucifera HOM05D003999 ORTHO05D005219 4.7e-32 141.4 122 56.6
unitig_578.g16064 Utricularia gibba HOM05D003999 ORTHO05D005219 6.1e-32 141.0 106 54.7
Lsat_1_v5_gn_7_51121 Lactuca sativa HOM05D003999 ORTHO05D005219 8.0e-32 140.6 111 57.7
ECA234G1030 Erigeron canadensis HOM05D003999 ORTHO05D005219 1.4e-31 139.8 113 58.4
FAN04G0885 Fragaria x ananassa HOM05D003999 ORTHO05D005219 3.9e-31 138.3 123 52.8
FvH4_5g27730 Fragaria vesca HOM05D003999 ORTHO05D005219 1.1e-30 136.7 123 52.0
FAN08G2100 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.1e-30 136.7 123 52.0
Sabra06G0056300 Salix brachista HOM05D003999 ORTHO05D005219 1.1e-30 136.7 136 51.5
Lalb_Chr11g0061221 Lupinus albus HOM05D003999 ORTHO05D005219 2.6e-30 135.6 99 58.6
Eucgr.C02221 Eucalyptus grandis HOM05D003999 ORTHO05D005219 4.4e-30 134.8 96 61.5
FAN13G0316 Fragaria x ananassa HOM05D003999 ORTHO05D005219 5.7e-30 134.4 113 54.0
Aqoxy7G02806 Aquilegia oxysepala HOM05D003999 ORTHO05D005219 9.7e-30 133.7 107 57.9
Gorai.011G210800 Gossypium raimondii HOM05D003999 ORTHO05D005219 9.7e-30 133.7 103 59.2
Potri.006G277400 Populus trichocarpa HOM05D003999 ORTHO05D005219 4.8e-29 131.3 116 49.1
Sp3g32620 Schrenkiella parvula HOM05D003999 ORTHO05D005219 1.1e-28 130.2 113 56.6
TAR383G0399 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.4e-28 129.8 101 59.4
C09p14530 Brassica napus HOM05D003999 ORTHO05D005219 2.4e-28 129.0 110 55.5
DCAR_018034 Daucus carota HOM05D003999 ORTHO05D005219 3.1e-28 128.6 88 63.6
TAR626G1281 Trochodendron aralioides HOM05D003999 ORTHO05D005219 3.1e-28 128.6 104 58.7
Nitab4.5_0001583g0100 Nicotiana tabacum HOM05D003999 ORTHO05D005219 5.3e-28 127.9 84 67.9
BcaC04g22860 Brassica carinata HOM05D003999 ORTHO05D005219 9.1e-28 127.1 116 50.9
BolC9t54356H Brassica oleracea HOM05D003999 ORTHO05D005219 9.1e-28 127.1 116 50.9
Thecc.09G004800 Theobroma cacao HOM05D003999 ORTHO05D005219 1.2e-27 126.7 115 53.0
Nitab4.5_0001225g0140 Nicotiana tabacum HOM05D003999 ORTHO05D005219 1.6e-27 126.3 84 67.9
AL3G49030 Arabidopsis lyrata HOM05D003999 ORTHO05D005219 2.0e-27 125.9 113 53.1
Thhalv10022602m.g Eutrema salsugineum HOM05D003999 ORTHO05D005219 2.0e-27 125.9 113 54.9
PSO170G0656 Papaver somniferum HOM05D003999 ORTHO05D005219 2.0e-27 125.9 111 53.2
CsaV3_1G031880 Cucumis sativus L. HOM05D003999 ORTHO05D005219 2.6e-27 125.6 89 62.9
AT2G19260 Arabidopsis thaliana HOM05D003999 ORTHO05D005219 3.5e-27 125.2 113 53.1
BcaB07g31614 Brassica carinata HOM05D003999 ORTHO05D005219 5.9e-27 124.4 116 50.9
Carub.0003s3349 Capsella rubella HOM05D003999 ORTHO05D005219 5.9e-27 124.4 116 51.7
CDE06G2299 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 5.9e-27 124.4 123 51.2
Ciclev10008331m.g Citrus clementina HOM05D003999 ORTHO05D005219 7.7e-27 124.0 118 50.8
Haze_18974 Corylus avellana HOM05D003999 ORTHO05D005219 7.7e-27 124.0 114 50.9
MBI13_g34042_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 7.7e-27 124.0 89 65.2
Haze_18980 Corylus avellana HOM05D003999 ORTHO05D005219 1.3e-26 123.2 114 50.9
CDE02G3353 Ceratophyllum demersum HOM05D003999 ORTHO05D005219 2.2e-26 122.5 115 53.9
A07p01530 Brassica napus HOM05D003999 ORTHO05D005219 2.9e-26 122.1 116 50.9
BraA07t27954Z Brassica rapa HOM05D003999 ORTHO05D005219 2.9e-26 122.1 116 50.9
MELO3C017428.2 Cucumis melo HOM05D003999 ORTHO05D005219 3.8e-26 121.7 88 61.4
C07p03110 Brassica napus HOM05D003999 ORTHO05D005219 8.5e-26 120.6 116 51.7
BolC7t40703H Brassica oleracea HOM05D003999 ORTHO05D005219 8.5e-26 120.6 116 51.7
Solyc02g069980.4 Solanum lycopersicum HOM05D003999 ORTHO05D005219 1.1e-25 120.2 63 77.8
BcaB03g16715 Brassica carinata HOM05D003999 ORTHO05D005219 1.5e-25 119.8 116 50.0
MBI16_g05835_MAGBIO Magnolia biondii HOM05D003999 ORTHO05D005219 1.5e-25 119.8 94 57.4
BcaC06g36543 Brassica carinata HOM05D003999 ORTHO05D005219 1.9e-25 119.4 116 50.9
Cfa020676 Carpinus fangiana HOM05D003999 ORTHO05D005219 1.9e-25 119.4 95 58.9
FAN18G4269 Fragaria x ananassa HOM05D003999 ORTHO05D005219 1.9e-25 119.4 105 51.4
Zm00001eb002000 Zea mays HOM05D003999 ORTHO05D005219 1.4e-23 113.2 89 55.1
Zm00001eb274650 Zea mays HOM05D003999 ORTHO05D005219 1.4e-23 113.2 110 47.3
TAR625G1146 Trochodendron aralioides HOM05D003999 ORTHO05D005219 1.2e-22 110.2 89 57.3
Os04g0425100 Oryza sativa ssp. japonica HOM05D003999 ORTHO05D005219 1.5e-22 109.8 88 54.5
Sabra06G0215100 Salix brachista HOM05D003999 ORTHO05D005219 4.4e-22 108.2 129 41.9
Aa31LG8G16300 Aethionema arabicum HOM05D003999 ORTHO05D005219 5.7e-22 107.8 107 47.7
GSVIVG01035550001 Vitis vinifera HOM05D003999 ORTHO05D005219 5.7e-22 107.8 79 57.0
ATR0681G357 Amborella trichopoda HOM05D003999 ORTHO05D005219 9.7e-22 107.1 102 51.0
ATR0626G364 Amborella trichopoda HOM05D003999 ORTHO05D005219 2.8e-21 105.5 110 45.5
Phvul.007G142700 Phaseolus vulgaris HOM05D003999 ORTHO05D005219 4.5e-19 98.2 63 65.1
CARHR109720 Cardamine hirsuta HOM05D003999 ORTHO05D005219 1.1e-17 93.6 87 49.4
Atru.chr7.2670 Acer truncatum HOM05D003999 ORTHO05D005219 2.5e-17 92.4 89 48.3
CiPaw.15G150400 Carya illinoinensis HOM05D003999 ORTHO05D005219 1.2e-16 90.1 87 48.3
Cfa020674 Carpinus fangiana HOM05D003999 ORTHO05D005219 3.6e-16 88.6 61 63.9
SEGI_05476 Sequoiadendron giganteum HOM05D003999 ORTHO05D005219 2.3e-15 85.9 90 46.7
Mapoly0046s0104 Marchantia polymorpha HOM05D003999 ORTHO05D005219 2.8e-13 79.0 75 49.3
SMO117G0282 Selaginella moellendorffii HOM05D003999 ORTHO05D005219 3.7e-13 78.6 78 46.2
CSS0017119 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 4.1e-12 75.1 53 64.2
Haze_22020 Corylus avellana HOM05D003999 ORTHO05D005219 3.5e-11 72.0 60 56.7
Manes.03G002401 Manihot esculenta HOM05D003999 ORTHO05D005219 5.0e-10 68.2 52 55.8
CSS0024594 Camellia sinensis var. sinensis HOM05D003999 ORTHO05D005219 1.9e-09 66.2 35 77.1
Cc00_g03720 Coffea canephora HOM05D003999 ORTHO05D005219 1.9e-09 66.2 60 51.7
PGSC0003DMG400021118 Solanum tuberosum HOM05D003999 ORTHO05D005219 1.4e-07 60.1 33 69.7


User provided reference genes

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