Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 1.9e-74 282.3 136 100.0
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 9.2e-61 236.9 127 85.8
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 2.1e-60 235.7 127 84.3
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.0e-59 233.4 127 85.0
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 2.3e-59 232.3 128 82.8
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 5.1e-59 231.1 135 80.7
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 3.3e-58 228.4 127 84.3
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 4.3e-58 228.0 127 84.3
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 5.6e-58 227.6 128 79.7
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 5.6e-58 227.6 133 82.7
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 7.3e-58 227.3 128 79.7
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 7.3e-58 227.3 128 82.0
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.2e-57 226.5 134 80.6
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 2.1e-57 225.7 128 81.2
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 2.1e-57 225.7 128 82.0
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 3.6e-57 224.9 128 79.7
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 4.7e-57 224.6 126 82.5
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 8.1e-57 223.8 132 79.5
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 6.9e-56 220.7 127 81.1
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 1.5e-55 219.5 127 79.5
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.5e-55 219.5 128 82.8
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 2.0e-55 219.2 127 78.7
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 2.6e-55 218.8 128 78.9
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 4.4e-55 218.0 128 77.3
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 4.4e-55 218.0 128 78.1
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 4.4e-55 218.0 128 79.7
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 5.8e-55 217.6 134 75.4
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 5.8e-55 217.6 132 75.8
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 7.6e-55 217.2 125 80.8
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 7.6e-55 217.2 129 79.8
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 7.6e-55 217.2 128 78.1
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 9.9e-55 216.9 127 78.0
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.3e-54 216.5 134 74.6
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 1.7e-54 216.1 131 76.3
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.7e-54 216.1 134 75.4
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 2.2e-54 215.7 130 78.5
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 2.2e-54 215.7 134 74.6
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 2.9e-54 215.3 127 76.4
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 3.8e-54 214.9 132 75.8
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 3.8e-54 214.9 133 74.4
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 4.9e-54 214.5 130 73.8
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 4.9e-54 214.5 128 76.6
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 4.9e-54 214.5 128 76.6
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 6.4e-54 214.2 128 76.6
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 1.1e-53 213.4 130 74.6
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 1.4e-53 213.0 128 75.8
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 2.4e-53 212.2 134 73.9
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.4e-53 212.2 128 76.6
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 2.4e-53 212.2 128 76.6
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 5.4e-53 211.1 128 75.8
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 1.6e-52 209.5 127 75.6
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 2.1e-52 209.1 127 74.0
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 2.1e-52 209.1 128 73.4
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.7e-52 208.8 128 75.8
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 2.7e-52 208.8 129 74.4
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 7.8e-52 207.2 128 72.7
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 1.0e-51 206.8 126 73.8
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.0e-51 206.8 127 72.4
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 1.3e-51 206.5 128 74.2
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 1.3e-51 206.5 129 73.6
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 1.7e-51 206.1 128 72.7
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 3.9e-51 204.9 128 71.9
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 5.1e-51 204.5 133 69.2
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 5.1e-51 204.5 128 71.9
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 6.6e-51 204.1 126 73.8
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 8.7e-51 203.8 128 71.1
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 8.7e-51 203.8 135 68.1
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 1.1e-50 203.4 132 68.2
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 1.5e-50 203.0 164 62.8
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 1.9e-50 202.6 126 72.2
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 2.5e-50 202.2 126 73.8
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 2.5e-50 202.2 126 73.8
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 2.5e-50 202.2 140 69.3
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 3.3e-50 201.8 133 69.9
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 3.3e-50 201.8 132 67.4
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 4.3e-50 201.4 133 67.7
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 4.3e-50 201.4 127 72.4
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 4.3e-50 201.4 127 71.7
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 5.6e-50 201.1 128 72.7
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 7.3e-50 200.7 133 66.9
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 7.3e-50 200.7 133 66.9
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 1.6e-49 199.5 133 66.2
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 1.6e-49 199.5 133 66.2
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 1.6e-49 199.5 133 66.2
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 8.1e-49 197.2 124 72.6
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 3.1e-48 195.3 124 71.8
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 3.1e-48 195.3 123 70.7
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 5.3e-48 194.5 128 68.0
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 1.2e-47 193.4 126 73.0
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 2.0e-47 192.6 113 78.8
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 3.4e-47 191.8 113 77.0
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 4.9e-46 188.0 115 72.2
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 6.4e-46 187.6 126 66.7
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 8.4e-46 187.2 127 66.9
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 5.4e-45 184.5 127 64.6
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 2.3e-43 179.1 126 66.7
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 3.9e-43 178.3 128 63.3
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 4.3e-42 174.9 128 59.4
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 3.1e-40 168.7 125 56.0
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 3.2e-37 158.7 92 79.3
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 1.2e-36 156.8 125 57.6
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 6.9e-32 141.0 129 51.2
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 2.0e-31 139.4 129 51.2
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 1.7e-30 136.3 114 57.0
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 2.9e-30 135.6 80 81.2
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.1e-29 133.7 154 46.1
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 2.1e-28 129.4 118 50.8
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 1.3e-25 120.2 82 70.7
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 8.2e-25 117.5 80 67.5
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 1.9e-18 96.3 54 75.9
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 1.9e-18 96.3 68 64.7
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 2.8e-17 92.4 54 70.4
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 1.8e-16 89.7 65 63.1
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 6.9e-16 87.8 55 70.9
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 2.6e-15 85.9 54 66.7
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 2.8e-09 65.9 41 73.2
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.0e-08 61.2 43 65.1
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.0e-07 59.7 43 62.8


User provided reference genes

Program Settings