Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035737.2 Cucumis melo HOM05D007048 ORTHO05D008811 1.5e-63 246.1 130 100.0
CsaV3_1G009910 Cucumis sativus L. HOM05D007048 ORTHO05D008811 4.0e-61 238.0 130 96.2
ClCG03G004020 Citrullus lanatus HOM05D007048 ORTHO05D008811 2.8e-54 215.3 139 84.2
Sed0017197 Sechium edule HOM05D007048 ORTHO05D008811 4.1e-50 201.4 130 80.8
Actinidia18303 Actinidia chinensis HOM05D007048 ORTHO05D008811 2.0e-44 182.6 128 71.1
RcHm_v2.0_Chr7g0188741 Rosa chinensis HOM05D007048 ORTHO05D008811 3.4e-44 181.8 124 77.4
TWI39G0039 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 3.4e-44 181.8 127 72.4
Prupe.5G142300 Prunus persica HOM05D007048 ORTHO05D008811 1.3e-43 179.9 126 75.4
Cfa018710 Carpinus fangiana HOM05D007048 ORTHO05D008811 6.4e-43 177.6 121 75.2
Haze_07101 Corylus avellana HOM05D007048 ORTHO05D008811 6.4e-43 177.6 126 73.8
MD06G1131300 Malus domestica HOM05D007048 ORTHO05D008811 8.3e-43 177.2 126 73.8
Dinv23221 Davidia involucrata HOM05D007048 ORTHO05D008811 1.9e-42 176.0 124 71.8
Rhsim08G0196900 Rhododendron simsii HOM05D007048 ORTHO05D008811 1.9e-42 176.0 119 72.3
Migut.D01184 Erythranthe guttata HOM05D007048 ORTHO05D008811 3.2e-42 175.3 124 71.8
CANSAT56G3502 Cannabis sativa HOM05D007048 ORTHO05D008811 5.4e-42 174.5 126 73.0
Manes.14G045100 Manihot esculenta HOM05D007048 ORTHO05D008811 5.4e-42 174.5 128 71.1
TWI14G0368 Tripterygium wilfordii HOM05D007048 ORTHO05D008811 5.4e-42 174.5 123 70.7
CANSAT56G3230 Cannabis sativa HOM05D007048 ORTHO05D008811 7.0e-42 174.1 126 73.0
SalBow1G8421 Salvia bowleyana HOM05D007048 ORTHO05D008811 9.2e-42 173.7 126 72.2
Hma1.2p1_0664F.1_g199000 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 2.7e-41 172.2 123 69.1
FAN18G3224 Fragaria x ananassa HOM05D007048 ORTHO05D008811 4.6e-41 171.4 114 78.9
Duzib068G0404 Durio zibethinus HOM05D007048 ORTHO05D008811 1.0e-40 170.2 119 73.9
Sabra15G0126100 Salix brachista HOM05D007048 ORTHO05D008811 1.7e-40 169.5 123 68.3
TAR475G0007 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.3e-40 169.1 114 73.7
TAR629G1913 Trochodendron aralioides HOM05D007048 ORTHO05D008811 2.3e-40 169.1 114 73.7
Thecc.03G140000 Theobroma cacao HOM05D007048 ORTHO05D008811 3.0e-40 168.7 130 69.2
Potri.015G105900 Populus trichocarpa HOM05D007048 ORTHO05D008811 3.9e-40 168.3 118 71.2
Ciclev10033023m.g Citrus clementina HOM05D007048 ORTHO05D008811 1.1e-39 166.8 113 75.2
Peaxi162Scf01168g00014 Petunia axillaris HOM05D007048 ORTHO05D008811 1.1e-39 166.8 119 70.6
Sopen07g028330 Solanum pennellii HOM05D007048 ORTHO05D008820 1.1e-39 166.8 118 69.5
GSVIVG01008645001 Vitis vinifera HOM05D007048 ORTHO05D008811 1.1e-39 166.8 129 69.0
Atru.chr6.1912 Acer truncatum HOM05D007048 ORTHO05D008811 2.5e-39 165.6 126 68.3
vmacro19180 Vaccinium macrocarpon HOM05D007048 ORTHO05D008811 2.5e-39 165.6 112 74.1
QL10p000556 Quercus lobata HOM05D007048 ORTHO05D008811 3.3e-39 165.2 120 70.0
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 4.3e-39 164.9 120 73.3
Gohir.D07G051200 Gossypium hirsutum HOM05D007048 ORTHO05D008811 5.6e-39 164.5 114 73.7
Gorai.001G054300 Gossypium raimondii HOM05D007048 ORTHO05D008811 5.6e-39 164.5 114 73.7
CAN.G521.6 Capsicum annuum HOM05D007048 ORTHO05D008811 7.3e-39 164.1 118 68.6
PGSC0003DMG400018389 Solanum tuberosum HOM05D007048 ORTHO05D008811 7.3e-39 164.1 118 67.8
Gohir.A07G046900 Gossypium hirsutum HOM05D007048 ORTHO05D008811 1.2e-38 163.3 114 72.8
Solyc07g054400.3 Solanum lycopersicum HOM05D007048 ORTHO05D008811 1.2e-38 163.3 118 68.6
Cc04_g05890 Coffea canephora HOM05D007048 ORTHO05D008811 1.6e-38 162.9 118 68.6
Hund10045 Selenicereus undatus HOM05D007048 ORTHO05D008811 8.0e-38 160.6 118 66.9
FAN04G3007 Fragaria x ananassa HOM05D007048 ORTHO05D008811 1.1e-37 160.2 121 73.6
CiPaw.11G000300 Carya illinoinensis HOM05D007048 ORTHO05D008811 2.3e-37 159.1 123 67.5
A03p16450 Brassica napus HOM05D007048 ORTHO05D008811 3.1e-37 158.7 119 69.7
BraA03t10934Z Brassica rapa HOM05D007048 ORTHO05D008811 3.1e-37 158.7 119 69.7
BcaNung07188 Brassica carinata HOM05D007048 ORTHO05D008811 4.0e-37 158.3 119 69.7
C03p19340 Brassica napus HOM05D007048 ORTHO05D008811 4.0e-37 158.3 119 69.7
BolC3t14320H Brassica oleracea HOM05D007048 ORTHO05D008811 4.0e-37 158.3 119 69.7
Cpa.g.sc13.165 Carica papaya HOM05D007048 ORTHO05D008811 4.0e-37 158.3 124 65.3
Nitab4.5_0003119g0030 Nicotiana tabacum HOM05D007048 ORTHO05D008811 5.2e-37 157.9 125 67.2
Nitab4.5_0002584g0070 Nicotiana tabacum HOM05D007048 ORTHO05D008811 6.8e-37 157.5 125 66.4
Aqoxy3G01543 Aquilegia oxysepala HOM05D007048 ORTHO05D008811 1.2e-36 156.8 108 71.3
CARHR257290 Cardamine hirsuta HOM05D007048 ORTHO05D008811 2.0e-36 156.0 116 70.7
Sp6g13100 Schrenkiella parvula HOM05D007048 ORTHO05D008811 2.0e-36 156.0 119 68.1
Sc22g0003410 Simmondsia chinensis HOM05D007048 ORTHO05D008811 2.6e-36 155.6 118 69.5
AL8G25120 Arabidopsis lyrata HOM05D007048 ORTHO05D008811 5.8e-36 154.5 114 69.3
Ah.02g114610 Amaranthus hybridus HOM05D007048 ORTHO05D008811 7.5e-36 154.1 116 66.4
PSO384G0987 Papaver somniferum HOM05D007048 ORTHO05D008811 7.5e-36 154.1 125 64.8
EL10Ac5g11295 Beta vulgaris HOM05D007048 ORTHO05D008811 9.8e-36 153.7 108 69.4
PSO339G2722 Papaver somniferum HOM05D007048 ORTHO05D008811 9.8e-36 153.7 125 64.0
arahy.Tifrunner.gnm1.ann1.QNIR3T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.7e-35 152.9 118 65.3
Glyma.04G201000 Glycine max HOM05D007048 ORTHO05D008811 1.7e-35 152.9 113 67.3
AT5G50930 Arabidopsis thaliana HOM05D007048 ORTHO05D008811 2.9e-35 152.1 114 69.3
MBI07_g41901_MAGBIO Magnolia biondii HOM05D007048 ORTHO05D008811 2.9e-35 152.1 113 67.3
Lj1g0016164 Lotus japonicus HOM05D007048 ORTHO05D008811 3.7e-35 151.8 113 68.1
Thhalv10014960m.g Eutrema salsugineum HOM05D007048 ORTHO05D008811 8.3e-35 150.6 119 65.5
Medtr3g098660 Medicago truncatula HOM05D007048 ORTHO05D008811 1.1e-34 150.2 113 68.1
Carub.0008s1094 Capsella rubella HOM05D007048 ORTHO05D008811 1.4e-34 149.8 114 67.5
arahy.Tifrunner.gnm1.ann1.8FCI62 Arachis hypogaea HOM05D007048 ORTHO05D008811 3.2e-34 148.7 111 67.6
Psat5g055240 Pisum sativum HOM05D007048 ORTHO05D008811 3.2e-34 148.7 109 69.7
SGA_v2.0_scaffold40G15679 Striga asiatica HOM05D007048 ORTHO05D008811 4.1e-34 148.3 160 53.8
TPR.G21584 Trifolium pratense HOM05D007048 ORTHO05D008811 1.2e-33 146.7 113 68.1
VMungo1309G1627 Vigna mungo HOM05D007048 ORTHO05D008811 1.2e-33 146.7 113 64.6
Lalb_Chr08g0237541 Lupinus albus HOM05D007048 ORTHO05D008811 1.6e-33 146.4 127 60.6
Phvul.009G161500 Phaseolus vulgaris HOM05D007048 ORTHO05D008811 2.1e-33 146.0 113 63.7
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 3.5e-33 145.2 118 64.4
arahy.Tifrunner.gnm1.ann1.CS080T Arachis hypogaea HOM05D007048 ORTHO05D008811 1.0e-32 143.7 114 68.4
Aa31LG3G7430 Aethionema arabicum HOM05D007048 ORTHO05D008811 1.3e-32 143.3 114 64.0
unitig_747.g21321 Utricularia gibba HOM05D007048 ORTHO05D008811 2.3e-32 142.5 149 53.7
Eucgr.K02194 Eucalyptus grandis HOM05D007048 ORTHO05D008811 6.6e-32 141.0 145 55.9
Os04g0397700 Oryza sativa ssp. japonica HOM05D007048 ORTHO05D008811 1.1e-31 140.2 115 60.9
Glyma.06G164400 Glycine max HOM05D007048 ORTHO05D008811 1.5e-31 139.8 113 61.9
arahy.Tifrunner.gnm1.ann1.DD5QTF Arachis hypogaea HOM05D007048 ORTHO05D008811 1.9e-31 139.4 114 65.8
HanXRQChr10g0316061 Helianthus annuus HOM05D007048 ORTHO05D008811 2.5e-31 139.0 125 58.4
PGR031G2395 Punica granatum HOM05D007048 ORTHO05D008811 1.6e-30 136.3 125 56.0
PGR031G3072 Punica granatum HOM05D007048 ORTHO05D008811 2.1e-30 136.0 125 55.2
PGR031G3844 Punica granatum HOM05D007048 ORTHO05D008811 4.7e-30 134.8 125 55.2
Lsat_1_v5_gn_5_10141 Lactuca sativa HOM05D007048 ORTHO05D008811 6.2e-30 134.4 121 58.7
MD14G1147700 Malus domestica HOM05D007048 ORTHO05D008811 6.2e-30 134.4 96 70.8
FvH4_5g09450 Fragaria vesca HOM05D007048 ORTHO05D008811 1.2e-28 130.2 84 79.8
Hma1.2p1_0664F.1_g198980 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.3e-27 126.7 81 74.1
Hma1.2p1_0664F.1_g198990 Hydrangea macrophylla HOM05D007048 ORTHO05D008811 1.3e-27 126.7 81 74.1
CSS0012628 Camellia sinensis var. sinensis HOM05D007048 ORTHO05D008811 2.4e-26 122.5 128 57.0
HPP92_008245 Vanilla planifolia HOM05D007048 ORTHO05D008811 1.6e-25 119.8 129 52.7
PGR044G0448 Punica granatum HOM05D007048 ORTHO05D008811 2.1e-25 119.4 119 53.8
ATR0582G167 Amborella trichopoda HOM05D007048 ORTHO05D008811 2.7e-25 119.0 98 63.3
SEGI_10153 Sequoiadendron giganteum HOM05D007048 ORTHO05D008811 1.0e-24 117.1 106 60.4
AUR62009534 Chenopodium quinoa HOM05D007048 ORTHO05D008811 2.3e-24 115.9 84 66.7
AUR62041697 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.9e-24 115.2 84 66.7
AUR62044083 Chenopodium quinoa HOM05D007048 ORTHO05D008811 3.9e-24 115.2 84 66.7
Nn3g16280 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.9e-23 112.8 76 73.7
Nn1g04900 Nelumbo nucifera HOM05D007048 ORTHO05D008811 1.1e-21 107.1 75 72.0
CDE05G0753 Ceratophyllum demersum HOM05D000512 ORTHO05D000861 8.9e-21 104.0 76 67.1
BcaB01g01606 Brassica carinata HOM05D007048 ORTHO05D008811 2.0e-20 102.8 95 61.1
FAN13G1437 Fragaria x ananassa HOM05D007048 ORTHO05D008811 7.6e-20 100.9 76 72.4
AagrBONN_evm.TU.Sc2ySwM_362.2725 Anthoceros agrestis HOM05D007048 ORTHO05D008811 4.9e-19 98.2 111 48.6
Zm00001eb084850 Zea mays HOM05D007048 ORTHO05D008811 1.1e-18 97.1 67 70.1
Pp3c2_1780 Physcomitrium patens HOM05D007048 ORTHO05D008811 2.4e-18 95.9 105 50.5
BcaB05g23641 Brassica carinata HOM05D007048 ORTHO05D008811 2.5e-15 85.9 74 64.9
Mapoly0109s0028 Marchantia polymorpha HOM05D007048 ORTHO05D008811 1.3e-14 83.6 109 42.2
RcHm_v2.0_Chr5g0067941 Rosa chinensis HOM05D052544 ORTHO05D008811 2.4e-10 69.3 53 69.8
COL.COLO4_37252 Corchorus olitorius HOM05D007048 ORTHO05D008811 1.6e-09 66.6 78 52.6
ECA233G3375 Erigeron canadensis HOM05D007048 ORTHO05D008811 1.0e-08 63.9 88 40.9
Oeu009260.1 Olea europaea HOM05D007048 ORTHO05D008811 8.7e-08 60.8 39 74.4


User provided reference genes

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