Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 2.4e-81 305.4 154 100.0
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 9.6e-22 107.5 88 65.9
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 1.4e-12 77.0 146 34.2
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 1.4e-12 77.0 146 34.2
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 2.4e-12 76.3 146 33.6
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 9.0e-12 74.3 128 37.5
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 1.2e-11 73.9 146 33.6
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 5.8e-11 71.6 146 32.2
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 5.8e-11 71.6 146 32.2
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 7.6e-11 71.2 146 32.2
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 9.9e-11 70.9 146 32.2
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 1.3e-10 70.5 55 65.5
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 1.3e-10 70.5 146 32.2
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 1.3e-10 70.5 146 31.5
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 1.7e-10 70.1 147 30.6
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 2.2e-10 69.7 146 30.8
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 2.2e-10 69.7 146 31.5
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 2.2e-10 69.7 146 31.5
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 3.8e-10 68.9 146 32.9
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 3.8e-10 68.9 146 30.8
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 3.8e-10 68.9 146 31.5
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 3.8e-10 68.9 146 31.5
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 3.8e-10 68.9 146 30.8
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 3.8e-10 68.9 146 31.5
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 3.8e-10 68.9 146 30.8
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 3.8e-10 68.9 146 30.8
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 4.9e-10 68.6 146 30.8
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 6.4e-10 68.2 146 31.5
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 8.4e-10 67.8 146 30.8
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 8.4e-10 67.8 146 30.1
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 8.4e-10 67.8 146 30.1
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 1.1e-09 67.4 146 30.8
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 1.1e-09 67.4 146 29.5
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 1.1e-09 67.4 146 30.8
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 1.1e-09 67.4 152 31.6
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 1.4e-09 67.0 146 30.1
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 1.9e-09 66.6 146 30.8
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 1.9e-09 66.6 146 30.8
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 1.9e-09 66.6 145 31.0
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 1.9e-09 66.6 146 30.8
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 2.4e-09 66.2 146 30.1
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 2.4e-09 66.2 146 30.1
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 2.4e-09 66.2 187 27.8
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 3.2e-09 65.9 149 29.5
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 3.2e-09 65.9 149 28.9
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 3.2e-09 65.9 146 30.8
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 3.2e-09 65.9 146 30.1
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 4.2e-09 65.5 149 29.5
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 5.5e-09 65.1 146 29.5
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 7.1e-09 64.7 146 28.1
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 7.1e-09 64.7 146 30.1
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 9.3e-09 64.3 142 30.3
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 9.3e-09 64.3 142 30.3
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 9.3e-09 64.3 146 30.1
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 1.2e-08 63.9 143 30.1
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 1.2e-08 63.9 143 30.1
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 1.2e-08 63.9 143 30.1
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 1.2e-08 63.9 146 30.1
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.2e-08 63.9 146 30.1
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 1.2e-08 63.9 146 28.8
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 1.2e-08 63.9 146 29.5
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 1.6e-08 63.5 146 29.5
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 1.6e-08 63.5 146 29.5
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 1.6e-08 63.5 145 29.7
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 1.6e-08 63.5 145 29.7
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 2.1e-08 63.2 146 29.5
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 2.1e-08 63.2 146 29.5
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 2.1e-08 63.2 146 29.5
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 2.1e-08 63.2 146 30.1
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 2.7e-08 62.8 147 29.9
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 2.7e-08 62.8 146 29.5
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 2.7e-08 62.8 146 29.5
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 2.7e-08 62.8 146 29.5
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 2.7e-08 62.8 146 29.5
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 2.7e-08 62.8 146 29.5
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 2.7e-08 62.8 147 29.3
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 3.5e-08 62.4 146 29.5
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 3.5e-08 62.4 146 29.5
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 3.5e-08 62.4 147 29.3
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 3.5e-08 62.4 146 29.5
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 4.6e-08 62.0 146 28.8
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 4.6e-08 62.0 146 30.1
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 4.6e-08 62.0 146 30.1
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 4.6e-08 62.0 146 30.1
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 4.6e-08 62.0 28 100.0
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 6.0e-08 61.6 141 29.8
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 6.0e-08 61.6 40 72.5
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 1.0e-07 60.8 132 30.3
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 1.0e-07 60.8 146 27.4
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 1.0e-07 60.8 146 27.4
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 1.3e-07 60.5 146 28.8
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 1.3e-07 60.5 146 29.5
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 1.8e-07 60.1 154 27.9
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 1.8e-07 60.1 146 27.4
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 2.3e-07 59.7 138 31.2
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 3.0e-07 59.3 51 60.8
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 3.9e-07 58.9 146 26.7
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 5.1e-07 58.5 142 28.9
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 5.1e-07 58.5 142 28.9
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 6.7e-07 58.2 146 28.8
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 6.7e-07 58.2 30 86.7
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 1.5e-06 57.0 115 29.6
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 3.3e-06 55.8 143 27.3
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 7.4e-06 54.7 148 27.0
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 7.4e-06 54.7 33 60.6
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 9.6e-06 54.3 28 85.7
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 9.6e-06 54.3 28 85.7
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 9.6e-06 54.3 163 25.2
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 9.6e-06 54.3 30 83.3
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 9.6e-06 54.3 33 69.7


User provided reference genes

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