Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C034648.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.4e-119 433.0 219 100.0
MELO3C031202.2 Cucumis melo HOM05D000306 ORTHO05D005993 3.1e-42 176.0 169 60.9
MELO3C033059.2 Cucumis melo HOM05D000306 ORTHO05D005993 3.8e-40 169.1 93 89.2
MELO3C020066.2 Cucumis melo HOM05D000306 ORTHO05D005993 7.2e-39 164.9 105 80.0
MELO3C032402.2 Cucumis melo HOM05D000306 ORTHO05D005993 6.1e-38 161.8 84 94.0
MELO3C017490.2 Cucumis melo HOM05D000306 ORTHO05D005993 6.7e-37 158.3 91 87.9
MELO3C033088.2 Cucumis melo HOM05D000306 ORTHO05D005993 3.3e-36 156.0 93 83.9
CsaV3_1G031330 Cucumis sativus L. HOM05D000306 ORTHO05D005993 5.7e-36 155.2 91 86.8
ClCG06G013170 Citrullus lanatus HOM05D000306 ORTHO05D005993 5.3e-34 148.7 90 82.2
QL02p097337 Quercus lobata HOM05D000306 ORTHO05D005993 2.0e-33 146.7 91 78.0
Sed0027913 Sechium edule HOM05D000306 ORTHO05D005993 2.0e-33 146.7 91 81.3
CiPaw.07G190100 Carya illinoinensis HOM05D000306 ORTHO05D005993 1.3e-32 144.1 91 76.9
MBI14_g17347_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D005993 2.9e-32 142.9 91 76.9
Rhsim01G0006800 Rhododendron simsii HOM05D000306 ORTHO05D005993 6.5e-32 141.7 111 64.0
Dinv41268 Davidia involucrata HOM05D000306 ORTHO05D005993 1.1e-31 141.0 91 74.7
CANSAT11G2131 Cannabis sativa HOM05D000306 ORTHO05D005993 1.9e-31 140.2 91 73.6
Cpa.g.sc95.64 Carica papaya HOM05D000306 ORTHO05D005993 3.2e-31 139.4 92 73.9
Cfa013519 Carpinus fangiana HOM05D000306 ORTHO05D005993 4.2e-31 139.0 91 73.6
Lj9A687T82 Lonicera japonica HOM05D000306 ORTHO05D005993 4.2e-31 139.0 92 71.7
A03p12730 Brassica napus HOM05D000306 ORTHO05D005993 5.5e-31 138.7 115 64.3
BraA03t10584Z Brassica rapa HOM05D000306 ORTHO05D005993 5.5e-31 138.7 115 64.3
Duzib150G0339 Durio zibethinus HOM05D000306 ORTHO05D005993 5.5e-31 138.7 96 69.8
Manes.06G023800 Manihot esculenta HOM05D000306 ORTHO05D005993 5.5e-31 138.7 93 73.1
TAR625G0692 Trochodendron aralioides HOM05D000306 ORTHO05D005993 5.5e-31 138.7 149 55.7
Actinidia04131 Actinidia chinensis HOM05D000306 ORTHO05D005993 7.2e-31 138.3 92 70.7
Ciclev10007423m.g Citrus clementina HOM05D000306 ORTHO05D005993 9.4e-31 137.9 111 63.1
Gohir.A13G211900 Gossypium hirsutum HOM05D000306 ORTHO05D005993 9.4e-31 137.9 96 68.8
Gorai.013G246300 Gossypium raimondii HOM05D000306 ORTHO05D005993 9.4e-31 137.9 96 68.8
vmacro13109 Vaccinium macrocarpon HOM05D000306 ORTHO05D005993 9.4e-31 137.9 111 63.1
Gohir.D13G216000 Gossypium hirsutum HOM05D000306 ORTHO05D005993 1.2e-30 137.5 96 68.8
Potri.006G170400 Populus trichocarpa HOM05D000306 ORTHO05D005993 1.2e-30 137.5 93 72.0
Sc14g0001190 Simmondsia chinensis HOM05D000306 ORTHO05D005993 1.2e-30 137.5 92 72.8
Sp6g19290 Schrenkiella parvula HOM05D000306 ORTHO05D005993 2.1e-30 136.7 92 69.6
Phvul.003G147900 Phaseolus vulgaris HOM05D000306 ORTHO05D005993 2.7e-30 136.3 97 68.0
Lsat_1_v5_gn_7_54301 Lactuca sativa HOM05D000306 ORTHO05D005993 3.6e-30 136.0 92 72.8
Prupe.1G089300 Prunus persica HOM05D000306 ORTHO05D005993 3.6e-30 136.0 91 71.4
Atru.chr7.720 Acer truncatum HOM05D000306 ORTHO05D005993 4.7e-30 135.6 91 69.2
GSVIVG01029151001 Vitis vinifera HOM05D000306 ORTHO05D005993 4.7e-30 135.6 91 72.5
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 6.1e-30 135.2 92 70.7
Hma1.2p1_1022F.1_g248760 Hydrangea macrophylla HOM05D000306 ORTHO05D005993 6.1e-30 135.2 91 68.1
Sabra06G0131200 Salix brachista HOM05D000306 ORTHO05D005993 6.1e-30 135.2 93 69.9
BcaC05g28220 Brassica carinata HOM05D000306 ORTHO05D005993 8.0e-30 134.8 160 50.6
C05p43000 Brassica napus HOM05D000306 ORTHO05D005993 8.0e-30 134.8 160 50.6
Lj4g0011507 Lotus japonicus HOM05D000306 ORTHO05D005993 8.0e-30 134.8 97 68.0
SHI02942 Sapria himalayana HOM05D000306 ORTHO05D005993 8.0e-30 134.8 93 66.7
unitig_749.g14164 Utricularia gibba HOM05D000306 ORTHO05D005993 8.0e-30 134.8 93 71.0
Glyma.13G094700 Glycine max HOM05D000306 ORTHO05D005993 1.0e-29 134.4 97 67.0
Nn8g40500 Nelumbo nucifera HOM05D000306 ORTHO05D005993 1.0e-29 134.4 91 69.2
Haze_22118 Corylus avellana HOM05D000306 ORTHO05D005993 1.4e-29 134.0 113 61.9
Thecc.09G168600 Theobroma cacao HOM05D000306 ORTHO05D005993 1.4e-29 134.0 96 69.8
VMungo1215G0493 Vigna mungo HOM05D000306 ORTHO05D005993 1.4e-29 134.0 154 52.6
AL8G33620 Arabidopsis lyrata HOM05D000306 ORTHO05D005993 1.8e-29 133.7 92 67.4
BcaB08g36111 Brassica carinata HOM05D000306 ORTHO05D005993 1.8e-29 133.7 92 68.5
BcaC08g43477 Brassica carinata HOM05D000306 ORTHO05D005993 1.8e-29 133.7 160 51.9
C06p08630 Brassica napus HOM05D000306 ORTHO05D005993 1.8e-29 133.7 160 51.9
FvH4_4g09130 Fragaria vesca HOM05D000306 ORTHO05D005993 1.8e-29 133.7 91 71.4
Lalb_Chr07g0180301 Lupinus albus HOM05D000306 ORTHO05D005993 1.8e-29 133.7 109 63.3
Eucgr.C00186 Eucalyptus grandis HOM05D000306 ORTHO05D005993 2.3e-29 133.3 91 70.3
Aa31LG3G13440 Aethionema arabicum HOM05D000306 ORTHO05D005993 3.0e-29 132.9 92 68.5
BolC1t03728H Brassica oleracea HOM05D000306 ORTHO05D005993 3.0e-29 132.9 160 51.2
RcHm_v2.0_Chr4g0403051 Rosa chinensis HOM05D000306 ORTHO05D005993 3.0e-29 132.9 91 71.4
C03p14920 Brassica napus HOM05D000306 ORTHO05D005993 4.0e-29 132.5 115 61.7
C09p62180 Brassica napus HOM05D000306 ORTHO05D005993 4.0e-29 132.5 115 60.9
BolC3t13934H Brassica oleracea HOM05D000306 ORTHO05D005993 4.0e-29 132.5 115 61.7
CAN.G584.9 Capsicum annuum HOM05D000306 ORTHO05D005993 5.2e-29 132.1 91 69.2
FAN17G3079 Fragaria x ananassa HOM05D000306 ORTHO05D005993 5.2e-29 132.1 91 70.3
FAN22G2400 Fragaria x ananassa HOM05D000306 ORTHO05D005993 5.2e-29 132.1 91 70.3
AT5G57590 Arabidopsis thaliana HOM05D000306 ORTHO05D005993 6.7e-29 131.7 92 66.3
BcaC01g06481 Brassica carinata HOM05D000306 ORTHO05D005993 6.7e-29 131.7 115 60.9
PSO063G2401 Papaver somniferum HOM05D000306 ORTHO05D005993 6.7e-29 131.7 99 63.6
PGR142G2544 Punica granatum HOM05D000306 ORTHO05D005993 6.7e-29 131.7 91 69.2
TWI34G1047 Tripterygium wilfordii HOM05D000306 ORTHO05D005993 8.8e-29 131.3 111 61.3
Ca_21207_v3 Cicer arietinum L. HOM05D000306 ORTHO05D005993 1.2e-28 131.0 97 66.0
Migut.J01457 Erythranthe guttata HOM05D000306 ORTHO05D005993 1.5e-28 130.6 93 66.7
MSTRG.19696 Avicennia marina HOM05D000306 ORTHO05D005993 2.0e-28 130.2 93 66.7
Thhalv10012677m.g Eutrema salsugineum HOM05D000306 ORTHO05D005993 2.0e-28 130.2 161 50.3
HPP92_013429 Vanilla planifolia HOM05D000306 ORTHO05D005993 2.0e-28 130.2 108 62.0
DCAR_009913 Daucus carota HOM05D000306 ORTHO05D005993 2.6e-28 129.8 91 69.2
ATR0580G146 Amborella trichopoda HOM05D000306 ORTHO05D005993 3.3e-28 129.4 142 54.9
MD13G1267300 Malus domestica HOM05D000306 ORTHO05D005993 3.3e-28 129.4 91 67.0
C01p37640 Brassica napus HOM05D000306 ORTHO05D005993 4.4e-28 129.0 115 60.0
HanXRQChr03g0068921 Helianthus annuus HOM05D000306 ORTHO05D005993 4.4e-28 129.0 151 52.3
Nitab4.5_0000244g0320 Nicotiana tabacum HOM05D000306 ORTHO05D005993 4.4e-28 129.0 91 67.0
PSO782G0277 Papaver somniferum HOM05D000306 ORTHO05D005993 4.4e-28 129.0 99 62.6
Psat4g011120 Pisum sativum HOM05D000306 ORTHO05D005993 4.4e-28 129.0 94 66.0
arahy.Tifrunner.gnm1.ann1.6YA4AW Arachis hypogaea HOM05D000306 ORTHO05D005993 5.7e-28 128.6 97 64.9
arahy.Tifrunner.gnm1.ann1.MG2J04 Arachis hypogaea HOM05D000306 ORTHO05D005993 5.7e-28 128.6 97 64.9
Sopen07g002910 Solanum pennellii HOM05D000306 ORTHO05D005993 5.7e-28 128.6 96 64.6
BcaC04g19951 Brassica carinata HOM05D000306 ORTHO05D005993 7.5e-28 128.3 92 66.3
C09p49460 Brassica napus HOM05D000306 ORTHO05D005993 7.5e-28 128.3 92 66.3
BolC9t57799H Brassica oleracea HOM05D000306 ORTHO05D005993 7.5e-28 128.3 92 66.3
Medtr4g128620 Medicago truncatula HOM05D000306 ORTHO05D005993 9.7e-28 127.9 97 62.9
TPR.G5323 Trifolium pratense HOM05D000306 ORTHO05D005993 9.7e-28 127.9 97 62.9
Solyc07g006810.3 Solanum lycopersicum HOM05D000306 ORTHO05D005993 1.3e-27 127.5 96 64.6
SGA_v2.0_scaffold69G23277 Striga asiatica HOM05D000306 ORTHO05D005993 1.3e-27 127.5 91 65.9
A10p15010 Brassica napus HOM05D000306 ORTHO05D005993 2.2e-27 126.7 115 58.3
BraA10t43578Z Brassica rapa HOM05D000306 ORTHO05D005993 2.2e-27 126.7 115 58.3
CDE02G3177 Ceratophyllum demersum HOM05D000306 ORTHO05D005993 2.2e-27 126.7 153 47.1
Hund09018 Selenicereus undatus HOM05D000306 ORTHO05D005993 2.2e-27 126.7 92 67.4
Carub.0008s1810 Capsella rubella HOM05D000306 ORTHO05D005993 3.7e-27 125.9 102 61.8
Aqoxy7G03117 Aquilegia oxysepala HOM05D000306 ORTHO05D005993 4.8e-27 125.6 92 65.2
Peaxi162Scf00050g00628 Petunia axillaris HOM05D000306 ORTHO05D005993 4.8e-27 125.6 90 65.6
BcaB01g04449 Brassica carinata HOM05D000306 ORTHO05D005993 1.4e-26 124.0 115 56.5
Cc06_g13470 Coffea canephora HOM05D000306 ORTHO05D005993 1.4e-26 124.0 92 63.0
Zm00001eb412500 Zea mays HOM05D000306 ORTHO05D005993 5.3e-26 122.1 95 60.0
AUR62040000 Chenopodium quinoa HOM05D000306 ORTHO05D005993 9.1e-26 121.3 92 63.0
AUR62040306 Chenopodium quinoa HOM05D000306 ORTHO05D005993 9.1e-26 121.3 92 63.0
Os08g0245400 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D005993 2.7e-25 119.8 103 54.4
Ah.09g229770 Amaranthus hybridus HOM05D000306 ORTHO05D005993 4.5e-25 119.0 94 60.6
Mapoly0061s0099 Marchantia polymorpha HOM05D000306 ORTHO05D005993 7.2e-23 111.7 89 58.4
Pp3c17_24020 Physcomitrium patens HOM05D000306 ORTHO05D005993 3.0e-21 106.3 92 53.3
SMO146G0375 Selaginella moellendorffii HOM05D000306 ORTHO05D005993 4.0e-21 105.9 111 50.5
CBR_g30689 Chara braunii HOM05D000306 ORTHO05D005993 9.8e-20 101.3 91 52.7
MCO16G292 Micromonas commoda HOM05D000306 ORTHO05D005993 1.2e-17 94.4 85 51.8
Cre06.g277200 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D005993 7.2e-15 85.1 84 51.2
Cfa024735 Carpinus fangiana HOM05D000306 ORTHO05D005993 9.5e-15 84.7 72 58.3
CSS0049760 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 2.6e-12 76.6 57 63.2
CSS0029448 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D005993 3.7e-11 72.8 51 64.7
MELO3C027570.2 Cucumis melo HOM05D000306 ORTHO05D005993 1.1e-10 71.2 41 87.8
arahy.Tifrunner.gnm1.ann1.46R2K9 Arachis hypogaea HOM05D000306 ORTHO05D083075 2.1e-06 57.0 62 48.4


User provided reference genes

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