Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033828.2 Cucumis melo HOM05D000629 ORTHO05D013393 3.5e-89 331.6 173 100.0
CsaV3_5G025460 Cucumis sativus L. HOM05D000629 ORTHO05D000576 1.7e-14 83.6 38 100.0
MBI15_g23242_MAGBIO Magnolia biondii HOM05D000629 ORTHO05D000576 4.2e-10 68.9 40 72.5
CsaV3_5G032000 Cucumis sativus L. HOM05D000629 ORTHO05D000576 7.2e-10 68.2 38 81.6
Dinv24925 Davidia involucrata HOM05D000629 ORTHO05D000576 9.4e-10 67.8 38 78.9
Dinv31134 Davidia involucrata HOM05D000629 ORTHO05D000576 9.4e-10 67.8 38 73.7
CSS0002729 Camellia sinensis var. sinensis HOM05D000629 ORTHO05D000576 1.6e-09 67.0 102 42.2
ClCG05G024900 Citrullus lanatus HOM05D000629 ORTHO05D000576 1.6e-09 67.0 38 78.9
Sed0025971 Sechium edule HOM05D000629 ORTHO05D000576 2.1e-09 66.6 38 81.6
Prupe.1G262300 Prunus persica HOM05D000629 ORTHO05D000576 4.7e-09 65.5 60 58.3
Rhsim12G0052100 Rhododendron simsii HOM05D000629 ORTHO05D000576 4.7e-09 65.5 38 73.7
Lj3A1046T48 Lonicera japonica HOM05D000629 ORTHO05D000576 8.0e-09 64.7 38 78.9
TAR622G0385 Trochodendron aralioides HOM05D000629 ORTHO05D000576 8.0e-09 64.7 38 73.7
vmacro09480 Vaccinium macrocarpon HOM05D000829 ORTHO05D000690 1.0e-08 64.3 41 65.9
Nn4g22953 Nelumbo nucifera HOM05D000629 ORTHO05D000576 1.4e-08 63.9 38 73.7
Actinidia08190 Actinidia chinensis HOM05D000629 ORTHO05D013393 2.3e-08 63.2 38 71.1
FAN07G2349 Fragaria x ananassa HOM05D000629 ORTHO05D000576 2.3e-08 63.2 60 56.7
Sed0017791 Sechium edule HOM05D000629 ORTHO05D000576 2.3e-08 63.2 38 73.7
vmacro01207 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 2.3e-08 63.2 38 71.1
TAR629G1864 Trochodendron aralioides HOM05D000629 ORTHO05D000576 3.0e-08 62.8 38 71.1
FvH4_4g35300 Fragaria vesca HOM05D000629 ORTHO05D000576 4.0e-08 62.4 60 56.7
FAN12G3339 Fragaria x ananassa HOM05D000629 ORTHO05D000576 4.0e-08 62.4 60 56.7
FAN17G1325 Fragaria x ananassa HOM05D000629 ORTHO05D000576 4.0e-08 62.4 60 56.7
Ciclev10030507m.g Citrus clementina HOM05D000629 ORTHO05D000576 6.8e-08 61.6 38 76.3
FAN22G2288 Fragaria x ananassa HOM05D000629 ORTHO05D000576 6.8e-08 61.6 60 56.7
Cpa.g.sc5.318 Carica papaya HOM05D000629 ORTHO05D000576 8.8e-08 61.2 38 73.7
CiPaw.05G144300 Carya illinoinensis HOM05D000629 ORTHO05D000576 8.8e-08 61.2 38 71.1
Hma1.2p1_0265F.1_g106320 Hydrangea macrophylla HOM05D000629 ORTHO05D000576 1.2e-07 60.8 38 68.4
GSVIVG01020136001 Vitis vinifera HOM05D000629 ORTHO05D000576 1.2e-07 60.8 38 73.7
Hma1.2p1_0289F.1_g114560 Hydrangea macrophylla HOM05D000629 ORTHO05D000576 1.5e-07 60.5 38 71.1
PSO832G3953 Papaver somniferum HOM05D000629 ORTHO05D000576 1.5e-07 60.5 38 73.7
RcHm_v2.0_Chr4g0444901 Rosa chinensis HOM05D000629 ORTHO05D000576 1.5e-07 60.5 60 55.0
VMungo0464G1995 Vigna mungo HOM05D000629 ORTHO05D000576 1.5e-07 60.5 38 71.1
Lalb_Chr06g0176551 Lupinus albus HOM05D000629 ORTHO05D000576 2.0e-07 60.1 39 69.2
Oeu015869.1 Olea europaea HOM05D000629 ORTHO05D000576 2.0e-07 60.1 73 47.9
PSO591G0034 Papaver somniferum HOM05D000629 ORTHO05D000576 2.0e-07 60.1 38 73.7
Phvul.004G022900 Phaseolus vulgaris HOM05D000629 ORTHO05D000576 2.0e-07 60.1 38 71.1
Atru.chr11.1925 Acer truncatum HOM05D000629 ORTHO05D000576 2.6e-07 59.7 38 76.3
Rhsim12G0126800 Rhododendron simsii HOM05D000629 ORTHO05D000576 2.6e-07 59.7 60 55.0
Ah.02g131710 Amaranthus hybridus HOM05D000629 ORTHO05D000576 3.4e-07 59.3 60 55.0
Lalb_Chr21g0319171 Lupinus albus HOM05D000629 ORTHO05D000576 3.4e-07 59.3 38 71.1
TAR371G0714 Trochodendron aralioides HOM05D000629 ORTHO05D000576 3.4e-07 59.3 38 68.4
CiPaw.06G077100 Carya illinoinensis HOM05D000629 ORTHO05D000576 4.4e-07 58.9 38 71.1
Haze_12115 Corylus avellana HOM05D000629 ORTHO05D000576 4.4e-07 58.9 38 71.1
Cfa009083 Carpinus fangiana HOM05D000629 ORTHO05D000576 5.7e-07 58.5 38 71.1
Lj2g0021309 Lotus japonicus HOM05D000629 ORTHO05D000576 5.7e-07 58.5 38 68.4
MD13G1084700 Malus domestica HOM05D000629 ORTHO05D000576 5.7e-07 58.5 60 58.3
TWI18G0523 Tripterygium wilfordii HOM05D000629 ORTHO05D000576 5.7e-07 58.5 38 68.4
DCAR_007116 Daucus carota HOM05D000629 ORTHO05D000576 7.5e-07 58.2 38 68.4
EL10Ac6g13094 Beta vulgaris HOM05D000629 ORTHO05D000576 9.8e-07 57.8 38 71.1
AUR62026328 Chenopodium quinoa HOM05D000629 ORTHO05D000576 1.7e-06 57.0 41 63.4
Dinv35005 Davidia involucrata HOM05D000629 ORTHO05D000576 1.7e-06 57.0 38 71.1
Glyma.19G016300 Glycine max HOM05D000629 ORTHO05D000576 1.7e-06 57.0 38 68.4
MD17G1042600 Malus domestica HOM05D000629 ORTHO05D000576 1.7e-06 57.0 38 68.4
Psat1g078160 Pisum sativum HOM05D000629 ORTHO05D000576 1.7e-06 57.0 38 68.4
QL02p079008 Quercus lobata HOM05D000629 ORTHO05D000576 1.7e-06 57.0 38 71.1
CSS0005583 Camellia sinensis var. sinensis HOM05D000629 ORTHO05D000084 2.2e-06 56.6 38 71.1
CSS0019274 Camellia sinensis var. sinensis HOM05D000629 ORTHO05D000576 2.2e-06 56.6 38 71.1
ClCG09G022170 Citrullus lanatus HOM05D000629 ORTHO05D000576 2.2e-06 56.6 30 90.0
Glyma.13G067800 Glycine max HOM05D000629 ORTHO05D000576 2.2e-06 56.6 38 65.8
SEGI_13294 Sequoiadendron giganteum HOM05D000629 ORTHO05D000576 2.2e-06 56.6 38 63.2
Lj6C798G9 Lonicera japonica HOM05D000629 ORTHO05D000576 2.8e-06 56.2 38 73.7
MD09G1041300 Malus domestica HOM05D000629 ORTHO05D000576 2.8e-06 56.2 38 65.8
Medtr6g008970 Medicago truncatula HOM05D000629 ORTHO05D000576 2.8e-06 56.2 38 68.4
Nn3g17050 Nelumbo nucifera HOM05D000629 ORTHO05D000576 2.8e-06 56.2 38 65.8
PSO161G0028 Papaver somniferum HOM05D000629 ORTHO05D000576 2.8e-06 56.2 38 65.8
PSO478G4498 Papaver somniferum HOM05D000629 ORTHO05D000576 3.7e-06 55.8 38 65.8
TPR.G17336 Trifolium pratense HOM05D000629 ORTHO05D000576 3.7e-06 55.8 38 68.4
arahy.Tifrunner.gnm1.ann1.MG25IW Arachis hypogaea HOM05D000629 ORTHO05D000576 4.9e-06 55.5 38 65.8
Ca_04238_v3 Cicer arietinum L. HOM05D000629 ORTHO05D000576 4.9e-06 55.5 38 65.8
Gohir.A03G144200 Gossypium hirsutum HOM05D000629 ORTHO05D000576 4.9e-06 55.5 38 68.4
MD16G1083700 Malus domestica HOM05D000629 ORTHO05D000576 4.9e-06 55.5 60 55.0
Prupe.3G276300 Prunus persica HOM05D000629 ORTHO05D000576 4.9e-06 55.5 38 68.4
TPR.G32588 Trifolium pratense HOM05D000629 ORTHO05D000576 4.9e-06 55.5 38 63.2
arahy.Tifrunner.gnm1.ann1.74EE6B Arachis hypogaea HOM05D000629 ORTHO05D000576 6.3e-06 55.1 38 65.8
Eucgr.I01884 Eucalyptus grandis HOM05D000629 ORTHO05D000576 6.3e-06 55.1 38 65.8
Atru.chr8.2428 Acer truncatum HOM05D000629 ORTHO05D000576 8.3e-06 54.7 38 63.2
Gohir.D02G167400 Gossypium hirsutum HOM05D000629 ORTHO05D000576 8.3e-06 54.7 38 68.4
Gorai.005G187800 Gossypium raimondii HOM05D000629 ORTHO05D000576 8.3e-06 54.7 38 68.4
QL03p067436 Quercus lobata HOM05D000629 ORTHO05D000576 8.3e-06 54.7 38 65.8
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 8.3e-06 54.7 38 63.2


User provided reference genes

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