Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C033573.2 Cucumis melo HOM05D000580 ORTHO05D001785 1.5e-26 122.1 61 100.0
DCAR_032516 Daucus carota HOM05D000580 ORTHO05D001785 1.3e-25 119.0 61 95.1
Hund04056 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund08804 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund12526 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund15206 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund19319 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund26843 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund27466 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund27479 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund27576 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund27893 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund27960 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund27983 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28047 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28107 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28266 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28324 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28457 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28467 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28486 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28517 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28527 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28630 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28744 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28757 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28844 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund28888 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29020 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29034 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29162 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29215 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29226 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29232 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29507 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29523 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29532 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29535 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29548 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29561 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29565 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29572 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29583 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29591 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29600 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29603 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29610 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29680 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29716 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29876 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29955 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund30033 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund30067 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund30082 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund30302 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund30445 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund30485 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund30800 Selenicereus undatus HOM05D000580 ORTHO05D001785 1.6e-25 118.6 61 93.4
Hund29665 Selenicereus undatus HOM05D000580 ORTHO05D001785 2.1e-25 118.2 60 93.3
CAN.G134.1 Capsicum annuum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
CARHR282220 Cardamine hirsuta HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Duzib026G0003 Durio zibethinus HOM05D000580 ORTHO05D001362 3.7e-25 117.5 61 93.4
Duzib124G0006 Durio zibethinus HOM05D000580 ORTHO05D001362 3.7e-25 117.5 61 93.4
Duzib237G0002 Durio zibethinus HOM05D000580 ORTHO05D001362 3.7e-25 117.5 61 93.4
Duzib256G0004 Durio zibethinus HOM05D000580 ORTHO05D001362 3.7e-25 117.5 61 93.4
Migut.D01433 Erythranthe guttata HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Gohir.1Z078400 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Gohir.A02G022101 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Gohir.A09G083720 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Gohir.A09G103750 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Gohir.A12G178675 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Gohir.A12G228650 Gossypium hirsutum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQChr00c0314g0573481 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQChr00c0394g0574571 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQChr00c0557g0575751 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQChr01g0020251 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQChr04g0127521 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQChr10g0284351 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQChr10g0318091 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQChr11g0326931 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQChr12g0369831 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
HanXRQCPg0580151 Helianthus annuus HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Lj2P1237T69 Lonicera japonica HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
PSO548G0060 Papaver somniferum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
RcHm_v2.0_CPg0501911 Rosa chinensis HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
SalBow1G5124 Salvia bowleyana HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Solyc00g500028.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Solyc00g500073.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
Solyc00g500158.1 Solanum lycopersicum HOM05D000580 ORTHO05D001785 3.7e-25 117.5 61 93.4
MELO3C000399.2 Cucumis melo HOM05D000580 ORTHO05D001785 4.8e-25 117.1 60 93.3
HanXRQChr11g0321061 Helianthus annuus HOM05D000580 ORTHO05D001785 4.8e-25 117.1 60 93.3
AL2G20590 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
AL2G21690 Arabidopsis lyrata HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
ATCG00730 Arabidopsis thaliana HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
Gohir.A03G137700 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
HanXRQChr02g0032961 Helianthus annuus HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
HanXRQChr02g0052671 Helianthus annuus HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
HanXRQChr15g0486551 Helianthus annuus HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
Medtr0002s0750 Medicago truncatula HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
Medtr4g034790 Medicago truncatula HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
Potri.011G074600 Populus trichocarpa HOM05D000580 ORTHO05D001785 1.1e-24 115.9 60 93.3
PGR111G0048 Punica granatum HOM05D000580 ORTHO05D001785 1.1e-24 115.9 61 91.8
Ah.10g027190 Amaranthus hybridus HOM05D000580 ORTHO05D001785 1.4e-24 115.5 61 90.2
Ah.10g027480 Amaranthus hybridus HOM05D000580 ORTHO05D001785 1.4e-24 115.5 61 90.2
CAN.G129.15 Capsicum annuum HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 91.8
CAN.G1595.5 Capsicum annuum HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 91.8
CAN.G307.12 Capsicum annuum HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 91.8
Gohir.A05G142175 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 91.8
HanXRQChr02g0052531 Helianthus annuus HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 91.8
Nn002s41358 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 91.8
Nn2g15463 Nelumbo nucifera HOM05D000580 ORTHO05D001785 1.8e-24 115.2 61 91.8
CAN.G327.17 Capsicum annuum HOM05D000580 ORTHO05D001785 2.4e-24 114.8 61 90.2
HanXRQChr11g0345251 Helianthus annuus HOM05D000580 ORTHO05D001785 2.4e-24 114.8 61 91.8
C05p18880 Brassica napus HOM05D000580 ORTHO05D001785 3.1e-24 114.4 61 90.2
BolSC35t60666H Brassica oleracea HOM05D000580 ORTHO05D001785 3.1e-24 114.4 61 90.2
BolSC47t61078H Brassica oleracea HOM05D000580 ORTHO05D001785 3.1e-24 114.4 61 90.2
BraSC143t45634Z Brassica rapa HOM05D000580 ORTHO05D001785 3.1e-24 114.4 61 90.2
BraSC58t46499Z Brassica rapa HOM05D000580 ORTHO05D001785 3.1e-24 114.4 61 90.2
BraSC59t46574Z Brassica rapa HOM05D000580 ORTHO05D001785 3.1e-24 114.4 61 90.2
LjContig00318g0018353 Lotus japonicus HOM05D000580 ORTHO05D001785 5.3e-24 113.6 61 88.5
LjContig00319g0017313 Lotus japonicus HOM05D000580 ORTHO05D001785 5.3e-24 113.6 61 88.5
LjContig00319g0022083 Lotus japonicus HOM05D000580 ORTHO05D001785 5.3e-24 113.6 61 88.5
Sc15g0001500 Simmondsia chinensis HOM05D000580 ORTHO05D001785 5.3e-24 113.6 61 91.8
HanXRQChr10g0303871 Helianthus annuus HOM05D000580 ORTHO05D001785 6.9e-24 113.2 59 91.5
EL10As12g24033 Beta vulgaris HOM05D000580 ORTHO05D001785 2.0e-23 111.7 58 89.7
CAN.G1367.7 Capsicum annuum HOM05D000580 ORTHO05D001785 2.0e-23 111.7 61 90.2
Hund27594 Selenicereus undatus HOM05D000580 ORTHO05D001785 3.4e-23 110.9 56 92.9
CAN.G127.15 Capsicum annuum HOM05D000580 ORTHO05D001785 4.5e-23 110.5 60 88.3
BraSC103t45448Z Brassica rapa HOM05D000580 ORTHO05D001785 1.0e-22 109.4 61 88.5
arahy.Tifrunner.gnm1.ann1.I9279U Arachis hypogaea HOM05D000580 ORTHO05D001785 1.3e-22 109.0 61 82.0
Lalb_Chr23g0274221 Lupinus albus HOM05D000580 ORTHO05D001785 1.7e-22 108.6 61 85.2
Lj1P929T39 Lonicera japonica HOM05D000580 ORTHO05D001785 2.2e-22 108.2 61 86.9
arahy.Tifrunner.gnm1.ann1.GZ00NU Arachis hypogaea HOM05D000580 ORTHO05D001785 2.9e-22 107.8 57 86.0
CAN.G219.33 Capsicum annuum HOM05D000580 ORTHO05D001785 2.9e-22 107.8 61 86.9
Lj2P1239T124 Lonicera japonica HOM05D000580 ORTHO05D001785 6.5e-22 106.7 54 92.6
Pp3c21_5670 Physcomitrium patens HOM05D000580 ORTHO05D001785 8.5e-22 106.3 61 82.0
Psat5g206560 Pisum sativum HOM05D000580 ORTHO05D001785 8.5e-22 106.3 61 82.0
RcHm_v2.0_Chr3g0476911 Rosa chinensis HOM05D000580 ORTHO05D001785 1.1e-21 105.9 61 85.2
Lalb_Chr03g0039301 Lupinus albus HOM05D000580 ORTHO05D001785 1.9e-21 105.1 61 82.0
arahy.Tifrunner.gnm1.ann1.J8VLEJ Arachis hypogaea HOM05D000580 ORTHO05D001785 2.5e-21 104.8 57 84.2
BraSC138t45556Z Brassica rapa HOM05D000580 ORTHO05D001785 2.5e-21 104.8 62 87.1
Gorai.004G150600 Gossypium raimondii HOM05D000580 ORTHO05D001785 7.2e-21 103.2 61 83.6
MCO11G579 Micromonas commoda HOM05D000580 ORTHO05D001785 4.6e-20 100.5 61 70.5
EL10Ac5g11666 Beta vulgaris HOM05D000580 ORTHO05D001785 6.1e-20 100.1 55 85.5
Hund28676 Selenicereus undatus HOM05D000580 ORTHO05D001785 6.1e-20 100.1 55 87.3
Psat6g110880 Pisum sativum HOM05D000580 ORTHO05D001785 1.0e-19 99.4 52 88.5
Gohir.A07G130966 Gossypium hirsutum HOM05D000580 ORTHO05D001785 2.3e-19 98.2 50 92.0
Gohir.A01G137760 Gossypium hirsutum HOM05D000580 ORTHO05D001785 5.1e-19 97.1 54 87.0
Gorai.004G123400 Gossypium raimondii HOM05D000580 ORTHO05D001785 3.3e-18 94.4 55 81.8
CAN.G1478.6 Capsicum annuum HOM05D000580 ORTHO05D001785 5.7e-18 93.6 49 93.9
Lalb_Chr18g0049331 Lupinus albus HOM05D000580 ORTHO05D001785 1.3e-17 92.4 61 75.4
Nn8g40935 Nelumbo nucifera HOM05D000580 ORTHO05D001785 8.2e-17 89.7 47 89.4
Nitab4.5_0001761g0200 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.1e-16 89.4 45 95.6
Gohir.A12G178640 Gossypium hirsutum HOM05D000580 ORTHO05D001785 6.9e-16 86.7 60 75.0
HanXRQChr00c0593g0576331 Helianthus annuus HOM05D000580 ORTHO05D001785 3.4e-15 84.3 43 90.7
Solyc03g122000.4 Solanum lycopersicum HOM05D000580 ORTHO05D001785 3.8e-14 80.9 45 84.4
Sopen05g009050 Solanum pennellii HOM05D000580 ORTHO05D001785 5.5e-13 77.0 40 87.5
SMO086G0045 Selaginella moellendorffii HOM05D000580 ORTHO05D001785 1.4e-11 72.4 58 65.5
HanXRQChr04g0094331 Helianthus annuus HOM05D000580 ORTHO05D001785 2.6e-10 68.2 35 85.7
HanXRQChr05g0148481 Helianthus annuus HOM05D000580 ORTHO05D001785 3.3e-10 67.8 52 67.3
Hund29543 Selenicereus undatus HOM05D000580 ORTHO05D001785 4.4e-10 67.4 33 90.9
Migut.D01367 Erythranthe guttata HOM05D000580 ORTHO05D001785 5.7e-10 67.0 34 100.0
arahy.Tifrunner.gnm1.ann1.7X81Z4 Arachis hypogaea HOM05D000580 ORTHO05D001785 7.4e-10 66.6 35 80.0
MELO3C034318.2 Cucumis melo HOM05D000580 ORTHO05D001785 7.4e-10 66.6 36 83.3
arahy.Tifrunner.gnm1.ann1.G4W793 Arachis hypogaea HOM05D000680 ORTHO05D001785 9.7e-10 66.2 33 84.8
Gohir.D01G102086 Gossypium hirsutum HOM05D000580 ORTHO05D001785 9.7e-10 66.2 35 82.9
Gorai.001G191300 Gossypium raimondii HOM05D000580 ORTHO05D001785 9.7e-10 66.2 35 85.7
Ah.10g028960 Amaranthus hybridus HOM05D000580 ORTHO05D001785 1.3e-09 65.9 33 87.9
Gohir.A12G178615 Gossypium hirsutum HOM05D000580 ORTHO05D001785 1.3e-09 65.9 33 87.9
HanXRQChr16g0513491 Helianthus annuus HOM05D000580 ORTHO05D001785 2.8e-09 64.7 33 84.8
BolSC29t60606H Brassica oleracea HOM05D000580 ORTHO05D001785 3.7e-09 64.3 33 84.8
Gohir.D07G170866 Gossypium hirsutum HOM05D000580 ORTHO05D001785 4.8e-09 63.9 34 82.4
BolSC35t60733H Brassica oleracea HOM05D000580 ORTHO05D001785 9.1e-08 59.7 34 82.4
SEGI_18833 Sequoiadendron giganteum HOM05D000580 ORTHO05D001289 1.2e-07 59.3 35 74.3
Lsat_1_v5_gn_2_129581 Lactuca sativa HOM05D000580 ORTHO05D011423 1.5e-07 58.9 29 100.0


User provided reference genes

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