Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C032122.2 Cucumis melo HOM05D005629 ORTHO05D008000 1.6e-180 636.0 313 100.0
CsaV3_3G027030 Cucumis sativus L. HOM05D005629 ORTHO05D008000 3.3e-29 133.3 63 98.4
Sed0004120 Sechium edule HOM05D005629 ORTHO05D008000 5.6e-29 132.5 63 98.4
ClCG05G013480 Citrullus lanatus HOM05D005629 ORTHO05D008000 7.4e-29 132.1 63 98.4
Dinv33339 Davidia involucrata HOM05D005629 ORTHO05D008000 1.3e-28 131.3 78 80.8
Actinidia36200 Actinidia chinensis HOM05D005629 ORTHO05D008000 1.6e-28 131.0 72 84.7
Prupe.3G305800 Prunus persica HOM05D005629 ORTHO05D008000 2.8e-28 130.2 71 85.9
Atru.chr6.2566 Acer truncatum HOM05D005629 ORTHO05D008000 3.7e-28 129.8 63 93.7
Cfa007230 Carpinus fangiana HOM05D005629 ORTHO05D008000 3.7e-28 129.8 63 93.7
Cc07_g00800 Coffea canephora HOM05D005629 ORTHO05D008000 3.7e-28 129.8 72 84.7
CiPaw.03G055300 Carya illinoinensis HOM05D005629 ORTHO05D008000 4.8e-28 129.4 63 93.7
Haze_14872 Corylus avellana HOM05D005629 ORTHO05D008000 4.8e-28 129.4 63 93.7
THA.LOC104825621 Tarenaya hassleriana HOM05D005629 ORTHO05D008000 4.8e-28 129.4 63 95.2
Migut.K01513 Erythranthe guttata HOM05D005629 ORTHO05D008000 6.2e-28 129.0 63 93.7
MD09G1011200 Malus domestica HOM05D005629 ORTHO05D008000 6.2e-28 129.0 71 84.5
RcHm_v2.0_Chr2g0175511 Rosa chinensis HOM05D005629 ORTHO05D008000 6.2e-28 129.0 71 85.9
ECA246G2396 Erigeron canadensis HOM05D005629 ORTHO05D008000 8.2e-28 128.6 63 92.1
FAN09G2642 Fragaria x ananassa HOM05D005629 ORTHO05D008000 8.2e-28 128.6 71 84.5
Lsat_1_v5_gn_9_1240 Lactuca sativa HOM05D005629 ORTHO05D008000 8.2e-28 128.6 63 92.1
Nitab4.5_0000559g0400 Nicotiana tabacum HOM05D005629 ORTHO05D008000 8.2e-28 128.6 63 92.1
Solyc03g005000.4 Solanum lycopersicum HOM05D005629 ORTHO05D008000 8.2e-28 128.6 63 92.1
Sopen03g001010 Solanum pennellii HOM05D005629 ORTHO05D008000 8.2e-28 128.6 63 92.1
PGSC0003DMG400013378 Solanum tuberosum HOM05D005629 ORTHO05D008000 8.2e-28 128.6 63 92.1
Thecc.04G035600 Theobroma cacao HOM05D005629 ORTHO05D008000 8.2e-28 128.6 71 83.1
FvH4_6g53470 Fragaria vesca HOM05D005629 ORTHO05D008000 1.1e-27 128.3 71 84.5
FAN02G3684 Fragaria x ananassa HOM05D005629 ORTHO05D008000 1.1e-27 128.3 71 84.5
Lju41A52T99 Lonicera japonica HOM05D005629 ORTHO05D008000 1.1e-27 128.3 63 92.1
QL02p071469 Quercus lobata HOM05D005629 ORTHO05D008000 1.1e-27 128.3 63 92.1
unitig_52.g17654 Utricularia gibba HOM05D005629 ORTHO05D008000 1.1e-27 128.3 63 92.1
Aa31LG2G5490 Aethionema arabicum HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 93.7
Ah.02g120470 Amaranthus hybridus HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 92.1
ATR0561G239 Amborella trichopoda HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 93.7
AL5G16240 Arabidopsis lyrata HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 93.7
AT3G27110 Arabidopsis thaliana HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 93.7
Carub.0005s0536 Capsella rubella HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 93.7
Migut.F00066 Erythranthe guttata HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 92.1
Hma1.2p1_1278F.1_g272330 Hydrangea macrophylla HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 92.1
Peaxi162Scf00700g00023 Petunia axillaris HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 92.1
Sp2g16240 Schrenkiella parvula HOM05D005629 ORTHO05D008000 1.4e-27 127.9 63 93.7
BcaC06g33860 Brassica carinata HOM05D005629 ORTHO05D008000 1.8e-27 127.5 63 92.1
A06p41480 Brassica napus HOM05D005629 ORTHO05D008000 1.8e-27 127.5 63 92.1
C07p36170 Brassica napus HOM05D005629 ORTHO05D008000 1.8e-27 127.5 63 92.1
BolC7t44133H Brassica oleracea HOM05D005629 ORTHO05D008000 1.8e-27 127.5 63 92.1
BraA06t27073Z Brassica rapa HOM05D005629 ORTHO05D008000 1.8e-27 127.5 63 92.1
CANSAT64G1539 Cannabis sativa HOM05D005629 ORTHO05D008000 1.8e-27 127.5 80 77.5
DCAR_011309 Daucus carota HOM05D005629 ORTHO05D008000 1.8e-27 127.5 63 92.1
Nn4g22342 Nelumbo nucifera HOM05D005629 ORTHO05D008000 1.8e-27 127.5 71 83.1
CAN.G1751.5 Capsicum annuum HOM05D005629 ORTHO05D008000 2.4e-27 127.1 63 90.5
Nitab4.5_0005161g0130 Nicotiana tabacum HOM05D005629 ORTHO05D008000 2.4e-27 127.1 63 90.5
EL10Ac6g15359 Beta vulgaris HOM05D005629 ORTHO05D008000 3.1e-27 126.7 63 90.5
Aqoxy3G01541 Aquilegia oxysepala HOM05D005629 ORTHO05D008000 4.0e-27 126.3 71 83.1
BcaC06g31019 Brassica carinata HOM05D005629 ORTHO05D008000 4.0e-27 126.3 63 92.1
BcaC06g33857 Brassica carinata HOM05D005629 ORTHO05D008000 4.0e-27 126.3 63 92.1
CSS0048682 Camellia sinensis var. sinensis HOM05D005629 ORTHO05D004503 4.0e-27 126.3 71 84.5
COL.COLO4_17207 Corchorus olitorius HOM05D005629 ORTHO05D008000 4.0e-27 126.3 63 90.5
Thhalv10004520m.g Eutrema salsugineum HOM05D005629 ORTHO05D008000 4.0e-27 126.3 63 92.1
PSO017G3506 Papaver somniferum HOM05D005629 ORTHO05D008000 4.0e-27 126.3 63 92.1
SalBow4G2288 Salvia bowleyana HOM05D005629 ORTHO05D008000 4.0e-27 126.3 71 81.7
Sc03g0006560 Simmondsia chinensis HOM05D005629 ORTHO05D008000 4.0e-27 126.3 63 90.5
Migut.H00778 Erythranthe guttata HOM05D005629 ORTHO05D008000 5.3e-27 125.9 63 92.1
Gohir.A07G228100 Gossypium hirsutum HOM05D005629 ORTHO05D008000 5.3e-27 125.9 63 92.1
Gohir.D07G235300 Gossypium hirsutum HOM05D005629 ORTHO05D008000 5.3e-27 125.9 63 92.1
Gorai.001G271100 Gossypium raimondii HOM05D005629 ORTHO05D008000 5.3e-27 125.9 63 92.1
Lj1g0025061 Lotus japonicus HOM05D005629 ORTHO05D008000 5.3e-27 125.9 63 90.5
Phvul.001G094100 Phaseolus vulgaris HOM05D005629 ORTHO05D008000 5.3e-27 125.9 71 83.1
Os01g0970700 Oryza sativa ssp. japonica HOM05D005629 ORTHO05D008000 6.9e-27 125.6 63 87.3
SGA_v2.0_scaffold253G45198 Striga asiatica HOM05D005629 ORTHO05D008000 6.9e-27 125.6 63 90.5
Psat3g164800 Pisum sativum HOM05D005629 ORTHO05D008000 9.0e-27 125.2 63 88.9
PGR142G0641 Punica granatum HOM05D005629 ORTHO05D008000 9.0e-27 125.2 80 75.0
Glyma.16G056900 Glycine max HOM05D005629 ORTHO05D008000 1.2e-26 124.8 71 81.7
Gohir.A11G064500 Gossypium hirsutum HOM05D005629 ORTHO05D008000 1.2e-26 124.8 63 90.5
Gohir.D11G068800 Gossypium hirsutum HOM05D005629 ORTHO05D008000 1.2e-26 124.8 63 90.5
VMungo1383G2395 Vigna mungo HOM05D005629 ORTHO05D008000 1.2e-26 124.8 63 90.5
arahy.Tifrunner.gnm1.ann1.26H0NE Arachis hypogaea HOM05D005629 ORTHO05D008000 1.5e-26 124.4 63 88.9
Ciclev10015840m.g Citrus clementina HOM05D005629 ORTHO05D008000 1.5e-26 124.4 63 92.1
GSVIVG01033097001 Vitis vinifera HOM05D005629 ORTHO05D008000 1.5e-26 124.4 63 90.5
Zm00001eb127160 Zea mays HOM05D005629 ORTHO05D008000 2.0e-26 124.0 63 85.7
Gorai.007G073600 Gossypium raimondii HOM05D005629 ORTHO05D008000 2.6e-26 123.6 63 88.9
Lalb_Chr14g0363391 Lupinus albus HOM05D005629 ORTHO05D008000 2.6e-26 123.6 63 87.3
Eucgr.I01649 Eucalyptus grandis HOM05D005629 ORTHO05D008000 3.4e-26 123.2 63 88.9
Actinidia05920 Actinidia chinensis HOM05D005629 ORTHO05D008000 4.5e-26 122.9 71 80.3
Ca_26782_v3 Cicer arietinum L. HOM05D005629 ORTHO05D008000 5.8e-26 122.5 63 87.3
Medtr7g033405 Medicago truncatula HOM05D005629 ORTHO05D008000 5.8e-26 122.5 63 87.3
Hund04337 Selenicereus undatus HOM05D005629 ORTHO05D008000 5.8e-26 122.5 63 87.3
AUR62003511 Chenopodium quinoa HOM05D005629 ORTHO05D008000 7.6e-26 122.1 62 88.7
AUR62017822 Chenopodium quinoa HOM05D005629 ORTHO05D008000 7.6e-26 122.1 62 88.7
HanXRQChr17g0550111 Helianthus annuus HOM05D005629 ORTHO05D008000 7.6e-26 122.1 63 87.3
vmacro05954 Vaccinium macrocarpon HOM05D005629 ORTHO05D008000 1.0e-25 121.7 78 76.9
Dinv25662 Davidia involucrata HOM05D005629 ORTHO05D000552 1.3e-25 121.3 60 93.3
SEGI_10761 Sequoiadendron giganteum HOM05D005629 ORTHO05D008000 1.3e-25 121.3 62 85.5
TWI56G1125 Tripterygium wilfordii HOM05D005629 ORTHO05D008000 2.2e-25 120.6 63 87.3
Gorai.004G126700 Gossypium raimondii HOM05D005629 ORTHO05D008000 2.9e-25 120.2 63 85.7
Cpa.g.sc171.18 Carica papaya HOM05D005629 ORTHO05D008000 3.8e-25 119.8 63 88.9
TPR.G38340 Trifolium pratense HOM05D005629 ORTHO05D008000 3.8e-25 119.8 63 87.3
AagrBONN_evm.TU.Sc2ySwM_117.2248 Anthoceros agrestis HOM05D005629 ORTHO05D008000 6.5e-25 119.0 63 84.1
HPP92_024293 Vanilla planifolia HOM05D005629 ORTHO05D008000 1.9e-24 117.5 63 84.1
HPP92_024304 Vanilla planifolia HOM05D005629 ORTHO05D008000 1.9e-24 117.5 63 84.1
Gohir.D08G117950 Gossypium hirsutum HOM05D005629 ORTHO05D008000 3.2e-24 116.7 80 68.8
Oeu058781.1 Olea europaea HOM05D005629 ORTHO05D008000 3.2e-24 116.7 63 87.3
Potri.001G330800 Populus trichocarpa HOM05D005629 ORTHO05D008000 4.2e-24 116.3 63 87.3
Rhsim10G0006600 Rhododendron simsii HOM05D005629 ORTHO05D008000 4.2e-24 116.3 63 90.5
Sabra16G0211800 Salix brachista HOM05D005629 ORTHO05D008000 7.1e-24 115.5 63 87.3
Mapoly0033s0112 Marchantia polymorpha HOM05D005629 ORTHO05D008000 9.3e-24 115.2 63 81.0
TAR622G1261 Trochodendron aralioides HOM05D005629 ORTHO05D008000 4.6e-23 112.8 63 81.0
MCO03G471 Micromonas commoda HOM05D005629 ORTHO05D008000 2.3e-22 110.5 63 74.6
Zm00001eb048250 Zea mays HOM05D005629 ORTHO05D008000 8.7e-22 108.6 71 71.8
Zm00001eb202540 Zea mays HOM05D002249 ORTHO05D002443 8.7e-22 108.6 71 71.8
Migut.G01029 Erythranthe guttata HOM05D005629 ORTHO05D008000 5.7e-21 105.9 58 84.5
Cre14.g620150 Chlamydomonas reinhardtii HOM05D005629 ORTHO05D008000 3.7e-20 103.2 86 57.0
Duzib264G0865 Durio zibethinus HOM05D005629 ORTHO05D008000 6.3e-20 102.4 51 94.1
PRCOL_00001739 Prasinoderma coloniale HOM05D005629 ORTHO05D008000 7.9e-15 85.5 61 63.9
A02p35090 Brassica napus HOM05D005629 ORTHO05D008000 1.7e-12 77.8 68 57.4
BraA02t08515Z Brassica rapa HOM05D005629 ORTHO05D008000 1.7e-12 77.8 68 57.4
CDE02G4678 Ceratophyllum demersum HOM05D000139 ORTHO05D000103 4.5e-10 69.7 36 88.9
FAN02G2357 Fragaria x ananassa HOM05D005629 ORTHO05D008000 6.7e-06 55.8 63 44.4
SGA_v2.0_scaffold94G28484 Striga asiatica HOM05D005629 ORTHO05D398949 8.8e-06 55.5 88 40.9


User provided reference genes

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