Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.3e-37 158.3 76 100.0
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 6.0e-33 143.7 73 93.2
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 1.5e-31 139.0 71 91.5
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 1.2e-28 129.4 63 98.4
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 3.4e-28 127.9 74 79.7
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 2.9e-27 124.8 63 93.7
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 8.3e-27 123.2 71 78.9
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 1.1e-26 122.9 68 86.8
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.4e-26 122.5 68 85.3
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.4e-26 122.5 68 85.3
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 2.4e-26 121.7 70 82.9
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 3.2e-26 121.3 63 92.1
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 3.2e-26 121.3 63 90.5
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 4.1e-26 120.9 70 81.4
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 7.0e-26 120.2 63 90.5
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 9.2e-26 119.8 63 88.9
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 1.2e-25 119.4 63 87.3
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 1.2e-25 119.4 67 80.6
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 1.6e-25 119.0 63 88.9
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 1.6e-25 119.0 67 83.6
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 2.0e-25 118.6 65 84.6
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 2.7e-25 118.2 63 87.3
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 2.7e-25 118.2 63 87.3
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 2.7e-25 118.2 63 87.3
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 3.5e-25 117.9 63 87.3
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 3.5e-25 117.9 63 88.9
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 3.5e-25 117.9 63 85.7
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 3.5e-25 117.9 63 87.3
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 4.6e-25 117.5 63 87.3
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 4.6e-25 117.5 63 85.7
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 6.0e-25 117.1 63 88.9
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 7.8e-25 116.7 62 88.7
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 7.8e-25 116.7 63 85.7
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 1.0e-24 116.3 62 90.3
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.0e-24 116.3 69 79.7
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.0e-24 116.3 63 85.7
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 1.0e-24 116.3 74 75.7
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 1.0e-24 116.3 63 87.3
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 1.0e-24 116.3 63 85.7
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 1.3e-24 115.9 63 84.1
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 1.3e-24 115.9 63 84.1
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 1.3e-24 115.9 63 84.1
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 1.3e-24 115.9 63 84.1
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.3e-24 115.9 63 84.1
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 1.3e-24 115.9 63 84.1
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 1.3e-24 115.9 63 85.7
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 1.3e-24 115.9 63 88.9
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 1.3e-24 115.9 63 85.7
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.7e-24 115.5 63 85.7
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.7e-24 115.5 65 81.5
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 1.7e-24 115.5 63 84.1
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 2.3e-24 115.2 63 84.1
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 2.3e-24 115.2 63 84.1
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 2.3e-24 115.2 63 85.7
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 2.3e-24 115.2 63 85.7
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 2.3e-24 115.2 63 87.3
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 2.3e-24 115.2 63 87.3
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 3.0e-24 114.8 63 87.3
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 3.0e-24 114.8 63 85.7
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 3.9e-24 114.4 63 84.1
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 3.9e-24 114.4 63 85.7
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 5.0e-24 114.0 63 82.5
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 5.0e-24 114.0 63 84.1
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 5.0e-24 114.0 63 84.1
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 6.6e-24 113.6 63 85.7
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 6.6e-24 113.6 63 85.7
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 6.6e-24 113.6 63 84.1
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 6.6e-24 113.6 63 85.7
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 6.6e-24 113.6 63 85.7
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 8.6e-24 113.2 63 85.7
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 8.6e-24 113.2 63 88.9
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 1.1e-23 112.8 62 87.1
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 1.5e-23 112.5 63 85.7
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 1.9e-23 112.1 63 84.1
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 1.9e-23 112.1 63 84.1
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 2.5e-23 111.7 63 79.4
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 2.5e-23 111.7 63 85.7
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 2.5e-23 111.7 63 85.7
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 2.5e-23 111.7 63 84.1
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 2.5e-23 111.7 63 82.5
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 3.3e-23 111.3 63 84.1
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 3.3e-23 111.3 63 84.1
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 3.3e-23 111.3 63 81.0
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 3.3e-23 111.3 63 82.5
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 4.3e-23 110.9 63 82.5
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 7.3e-23 110.2 63 82.5
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 7.3e-23 110.2 63 82.5
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 7.3e-23 110.2 63 82.5
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 7.3e-23 110.2 63 84.1
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 9.5e-23 109.8 63 81.0
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.2e-22 109.4 63 81.0
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 1.6e-22 109.0 63 79.4
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 2.1e-22 108.6 63 81.0
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 2.1e-22 108.6 63 79.4
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 2.8e-22 108.2 63 82.5
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 4.7e-22 107.5 63 79.4
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 1.8e-21 105.5 61 83.6
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.8e-21 105.5 62 80.6
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 2.3e-21 105.1 66 74.2
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 5.2e-21 104.0 63 77.8
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 8.9e-21 103.2 63 76.2
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 1.5e-20 102.4 61 82.0
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 1.5e-20 102.4 61 82.0
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.0e-20 102.1 63 77.8
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 3.4e-20 101.3 58 82.8
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 1.3e-19 99.4 55 87.3
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 3.7e-19 97.8 63 71.4
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 3.7e-19 97.8 63 73.0
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 4.9e-19 97.4 63 71.4
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 1.9e-18 95.5 63 71.4
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 1.6e-17 92.4 63 69.8
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 6.0e-17 90.5 55 80.0
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 1.2e-12 76.3 45 77.8
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 1.5e-12 75.9 64 60.9
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 1.7e-11 72.4 35 91.4
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 3.2e-10 68.2 63 52.4
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 2.7e-09 65.1 34 85.3
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 2.8e-06 55.1 35 71.4


User provided reference genes

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